RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Srpk2O54781 681 aaKnown RBP18.17■□□□□ 0.5
Clcn3-204ENSMUST00000110301 UacaQ8CGB3 1411 aa18.16■□□□□ 0.5
Clcn3-204ENSMUST00000110301 Rad21Q61550 635 aaKnown RBP18.16■□□□□ 0.5
Clcn3-204ENSMUST00000110301 Grin2aP35436 1464 aa18.15■□□□□ 0.5
Clcn3-204ENSMUST00000110301 Fgd6Q69ZL1 1399 aa18.14■□□□□ 0.49
Clcn3-204ENSMUST00000110301 Ifit1bl1D3Z6F0 470 aa18.14■□□□□ 0.49
Clcn3-204ENSMUST00000110301 TnnQ80Z71 1560 aa18.14■□□□□ 0.49
Clcn3-204ENSMUST00000110301 Fam135aQ6NS59 1506 aa18.13■□□□□ 0.49
Clcn3-204ENSMUST00000110301 Tiam1Q60610 1591 aa18.13■□□□□ 0.49
Clcn3-204ENSMUST00000110301 Ncapd3Q6ZQK0 1506 aa18.12■□□□□ 0.49
Clcn3-204ENSMUST00000110301 Cwc22Q8C5N3 908 aaKnown RBP18.11■□□□□ 0.49
Clcn3-204ENSMUST00000110301 Wwc2Q6NXJ0 1187 aa18.1■□□□□ 0.49
Clcn3-204ENSMUST00000110301 Thoc2B1AZI6 1594 aaKnown RBP18.09■□□□□ 0.49
Clcn3-204ENSMUST00000110301 Ncoa2Q61026 1462 aa18.08■□□□□ 0.49
Clcn3-204ENSMUST00000110301 Polr3glQ8R0C0 218 aa18.07■□□□□ 0.48
Clcn3-204ENSMUST00000110301 Usp47Q8BY87 1376 aa18.06■□□□□ 0.48
Clcn3-204ENSMUST00000110301 Pcf11G3X9Z4 1553 aa18.06■□□□□ 0.48
Clcn3-204ENSMUST00000110301 Fhad1A6PWD2 1420 aa18.05■□□□□ 0.48
Clcn3-204ENSMUST00000110301 1700123L14RikQ3V2K7 440 aa18.03■□□□□ 0.48
Clcn3-204ENSMUST00000110301 Cnga1P29974 684 aa18.03■□□□□ 0.48
Clcn3-204ENSMUST00000110301 Spag9Q58A65 1321 aaKnown RBP18.02■□□□□ 0.48
Clcn3-204ENSMUST00000110301 Neo1P97798 1493 aa18.01■□□□□ 0.47
Clcn3-204ENSMUST00000110301 IqubQ8CDK3 788 aa18.01■□□□□ 0.47
Clcn3-204ENSMUST00000110301 MyclP10166 368 aa18■□□□□ 0.47
Clcn3-204ENSMUST00000110301 Disp1Q3TDN0 1521 aa18■□□□□ 0.47
Clcn3-204ENSMUST00000110301 Ankrd26Q811D2 1581 aa18■□□□□ 0.47
Clcn3-204ENSMUST00000110301 Gm14025A2AP89 1413 aa18■□□□□ 0.47
Clcn3-204ENSMUST00000110301 Samd9lQ69Z37 1561 aa18■□□□□ 0.47
Clcn3-204ENSMUST00000110301 Rangap1P46061 589 aaKnown RBP17.99■□□□□ 0.47
Clcn3-204ENSMUST00000110301 Stag3O70576 1240 aa17.99■□□□□ 0.47
Clcn3-204ENSMUST00000110301 Fam163aQ8CAA5 168 aa17.99■□□□□ 0.47
Clcn3-204ENSMUST00000110301 TchhA0A0B4J1F9 1599 aa17.96■□□□□ 0.47
Clcn3-204ENSMUST00000110301 Stk26Q99JT2 416 aa17.96■□□□□ 0.47
Clcn3-204ENSMUST00000110301 Map3k5O35099 1380 aa17.96■□□□□ 0.47
Clcn3-204ENSMUST00000110301 Vps8Q0P5W1 1427 aa17.96■□□□□ 0.46
Clcn3-204ENSMUST00000110301 Exosc9Q9JHI7 438 aaKnown RBP17.95■□□□□ 0.46
Clcn3-204ENSMUST00000110301 Mug1P28665 1476 aa17.95■□□□□ 0.46
Clcn3-204ENSMUST00000110301 Kif21aQ9QXL2 1672 aa17.93■□□□□ 0.46
Clcn3-204ENSMUST00000110301 Gpatch8A2A6A1 1505 aa17.93■□□□□ 0.46
Clcn3-204ENSMUST00000110301 Calr4Q3TQS0 420 aa17.93■□□□□ 0.46
Clcn3-204ENSMUST00000110301 Ccdc141E9Q8Q6 1531 aa17.93■□□□□ 0.46
Clcn3-204ENSMUST00000110301 Pla2r1Q62028 1487 aa17.92■□□□□ 0.46
Clcn3-204ENSMUST00000110301 PxdnQ3UQ28 1475 aa17.91■□□□□ 0.46
Clcn3-204ENSMUST00000110301 NexmifQ5DTT1 1515 aa17.91■□□□□ 0.46
Clcn3-204ENSMUST00000110301 Slx4Q6P1D7 1565 aa17.91■□□□□ 0.46
Clcn3-204ENSMUST00000110301 Ofd1Q80Z25 1017 aa17.91■□□□□ 0.46
Clcn3-204ENSMUST00000110301 Exoc6Q8R313 802 aa17.9■□□□□ 0.46
Clcn3-204ENSMUST00000110301 Fan1Q69ZT1 1020 aa17.89■□□□□ 0.45
Clcn3-204ENSMUST00000110301 Pde4cQ3UEI1 686 aa17.89■□□□□ 0.45
Clcn3-204ENSMUST00000110301 Ttll5Q8CHB8 1328 aa17.88■□□□□ 0.45
Clcn3-204ENSMUST00000110301 Gtf2e1Q9D0D5 440 aa17.88■□□□□ 0.45
Clcn3-204ENSMUST00000110301 Arhgap5P97393 1501 aa17.88■□□□□ 0.45
Clcn3-204ENSMUST00000110301 Srcin1Q9QWI6 1250 aa17.87■□□□□ 0.45
Clcn3-204ENSMUST00000110301 NgefQ8CHT1 710 aa17.86■□□□□ 0.45
Clcn3-204ENSMUST00000110301 A2mQ6GQT1 1474 aa17.86■□□□□ 0.45
Clcn3-204ENSMUST00000110301 Magi1Q6RHR9 1471 aa17.84■□□□□ 0.45
Clcn3-204ENSMUST00000110301 Ankrd36D3Z4K0 1415 aa17.84■□□□□ 0.45
Clcn3-204ENSMUST00000110301 Abcc5Q9R1X5 1436 aa17.83■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Gm1043A0A140LJC2 1431 aa17.83■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Naip2Q9QUK4 1447 aa17.83■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Dhx9O70133 1380 aaKnown RBP17.83■□□□□ 0.44
Clcn3-204ENSMUST00000110301 3425401B19RikD3Z1D3 1412 aa17.82■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Ncoa3O09000 1398 aa17.82■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Trim26Q99PN3 545 aa17.82■□□□□ 0.44
Clcn3-204ENSMUST00000110301 WizO88286 1684 aaKnown RBP17.82■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Ecm2Q5FW85 670 aa17.8■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Neurod2Q62414 383 aa17.8■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Prdm16A2A935 1275 aa17.79■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Ppp4r2Q0VGB7 417 aa17.79■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Rock2P70336 1388 aa17.79■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Txndc2Q6P902 515 aa17.78■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Magi3Q9EQJ9 1476 aa17.77■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Dapk1Q80YE7 1442 aa17.77■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Slc4a1apE9PX68 744 aa17.77■□□□□ 0.44
Clcn3-204ENSMUST00000110301 Il16O54824 1322 aa17.76■□□□□ 0.43
Clcn3-204ENSMUST00000110301 Anp32aO35381 247 aa17.76■□□□□ 0.43
Clcn3-204ENSMUST00000110301 Arid4bA2CG63 1314 aaKnown RBP17.75■□□□□ 0.43
Clcn3-204ENSMUST00000110301 Unc13aQ4KUS2 1712 aa17.75■□□□□ 0.43
Clcn3-204ENSMUST00000110301 BC005561E9Q5E2 1589 aa17.74■□□□□ 0.43
Clcn3-204ENSMUST00000110301 Dcaf11Q91VU6 549 aa17.73■□□□□ 0.43
Clcn3-204ENSMUST00000110301 Tmf1B9EKI3 1091 aa17.73■□□□□ 0.43
Clcn3-204ENSMUST00000110301 Apbb1Q9QXJ1 710 aa17.73■□□□□ 0.43
Clcn3-204ENSMUST00000110301 Psme1P97371 249 aa17.73■□□□□ 0.43
Clcn3-204ENSMUST00000110301 Znf316Q6PGE4 1016 aa17.72■□□□□ 0.43
Clcn3-204ENSMUST00000110301 MlecQ6ZQI3 291 aaKnown RBP17.72■□□□□ 0.43
Clcn3-204ENSMUST00000110301 Cd109Q8R422 1442 aa17.72■□□□□ 0.43
Clcn3-204ENSMUST00000110301 Shroom2A2ALU4 1481 aa17.71■□□□□ 0.43
Clcn3-204ENSMUST00000110301 Pank3Q8R2W9 370 aa17.71■□□□□ 0.43
Clcn3-204ENSMUST00000110301 Usp40Q8BWR4 1235 aa17.7■□□□□ 0.42
Clcn3-204ENSMUST00000110301 Nup160Q9Z0W3 1402 aaKnown RBP17.7■□□□□ 0.42
Clcn3-204ENSMUST00000110301 Upf2A2AT37 1269 aaKnown RBP17.69■□□□□ 0.42
Clcn3-204ENSMUST00000110301 SafbD3YXK2 937 aaKnown RBP17.69■□□□□ 0.42
Clcn3-204ENSMUST00000110301 Utp14aQ640M1 767 aaKnown RBP17.68■□□□□ 0.42
Clcn3-204ENSMUST00000110301 Inpp5dQ9ES52 1191 aa17.68■□□□□ 0.42
Clcn3-204ENSMUST00000110301 Aplp2Q06335 707 aa17.68■□□□□ 0.42
Clcn3-204ENSMUST00000110301 Igf1rQ60751 1373 aa17.67■□□□□ 0.42
Clcn3-204ENSMUST00000110301 Shq1Q7TMX5 569 aa17.66■□□□□ 0.42
Clcn3-204ENSMUST00000110301 Nsd2Q8BVE8 1365 aa17.66■□□□□ 0.42
Clcn3-204ENSMUST00000110301 Ythdc2B2RR83 1445 aaKnown RBP17.65■□□□□ 0.42
Clcn3-204ENSMUST00000110301 Zscan21Q07231 555 aa17.65■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms