RNA–Protein interactions for RNA: ENSMUST00000109113.7

Clk4-203, Transcript of Dual specificity protein kinase CLK4, mousemouse

TSL 1 (best) BASIC

Gene Clk4, Length 1,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-203ENSMUST00000109113 Cc2d2aQ8CFW7 1633 aa9.86□□□□□ -0.83
Clk4-203ENSMUST00000109113 Lhx6Q9R1R0 363 aa9.85□□□□□ -0.83
Clk4-203ENSMUST00000109113 Gm19402J3QJV4 266 aa9.84□□□□□ -0.83
Clk4-203ENSMUST00000109113 Sptlc1O35704 473 aa9.83□□□□□ -0.84
Clk4-203ENSMUST00000109113 Znf354bQ9QXT9 601 aa9.83□□□□□ -0.84
Clk4-203ENSMUST00000109113 Kdm2aP59997 1161 aa9.82□□□□□ -0.84
Clk4-203ENSMUST00000109113 Pdzrn4E9PUZ9 1014 aa9.8□□□□□ -0.84
Clk4-203ENSMUST00000109113 Neurod1Q60867 357 aa9.8□□□□□ -0.84
Clk4-203ENSMUST00000109113 Spock2Q9ER58 423 aa9.8□□□□□ -0.84
Clk4-203ENSMUST00000109113 Emid1Q91VF5 444 aa9.79□□□□□ -0.84
Clk4-203ENSMUST00000109113 A930017K11RikE0CXQ2 571 aa9.78□□□□□ -0.84
Clk4-203ENSMUST00000109113 Fam135aQ6NS59 1506 aa9.78□□□□□ -0.84
Clk4-203ENSMUST00000109113 Otop3Q80UF9 577 aa9.77□□□□□ -0.85
Clk4-203ENSMUST00000109113 Onecut3Q8K557 490 aa9.77□□□□□ -0.85
Clk4-203ENSMUST00000109113 Atad2bE9Q166 1460 aaKnown RBP9.77□□□□□ -0.85
Clk4-203ENSMUST00000109113 AaasP58742 546 aa9.76□□□□□ -0.85
Clk4-203ENSMUST00000109113 Ercc6F8VPZ5 1481 aa9.75□□□□□ -0.85
Clk4-203ENSMUST00000109113 Mnx1Q9QZW9 404 aa9.73□□□□□ -0.85
Clk4-203ENSMUST00000109113 Rb1cc1Q9ESK9 1588 aa9.72□□□□□ -0.85
Clk4-203ENSMUST00000109113 A030014E15RikA0A1Y7VJV2 120 aa9.72□□□□□ -0.85
Clk4-203ENSMUST00000109113 Kctd12Q6WVG3 327 aa9.72□□□□□ -0.85
Clk4-203ENSMUST00000109113 Erbb3Q61526 1339 aa9.72□□□□□ -0.85
Clk4-203ENSMUST00000109113 Klra4Q60651 263 aa9.71□□□□□ -0.85
Clk4-203ENSMUST00000109113 Baz1bQ9Z277 1479 aa9.71□□□□□ -0.86
Clk4-203ENSMUST00000109113 Nap1l5Q9JJF0 156 aa9.7□□□□□ -0.86
Clk4-203ENSMUST00000109113 Crim1Q9JLL0 1037 aa9.68□□□□□ -0.86
Clk4-203ENSMUST00000109113 Ferd3lQ923Z4 168 aa9.67□□□□□ -0.86
Clk4-203ENSMUST00000109113 Tox2A2A472 547 aa9.66□□□□□ -0.86
Clk4-203ENSMUST00000109113 A530084C06RikQ3UTW2 186 aa9.65□□□□□ -0.86
Clk4-203ENSMUST00000109113 Pax4P32115 349 aa9.64□□□□□ -0.87
Clk4-203ENSMUST00000109113 Itgbl1Q8VDV0 494 aa9.64□□□□□ -0.87
Clk4-203ENSMUST00000109113 Smarca2Q6DIC0 1577 aa9.61□□□□□ -0.87
Clk4-203ENSMUST00000109113 Fbxo11Q7TPD1 930 aaKnown RBP9.58□□□□□ -0.88
Clk4-203ENSMUST00000109113 Gm7138L7N2C3 230 aa9.57□□□□□ -0.88
Clk4-203ENSMUST00000109113 Art1Q60935 325 aa9.57□□□□□ -0.88
Clk4-203ENSMUST00000109113 Itga6Q61739 1091 aa9.57□□□□□ -0.88
Clk4-203ENSMUST00000109113 Ms4a4cQ9D3F6 226 aa9.57□□□□□ -0.88
Clk4-203ENSMUST00000109113 Gm3238W4VSP7 230 aa9.57□□□□□ -0.88
Clk4-203ENSMUST00000109113 Crybg2B7ZCC2 1516 aa9.57□□□□□ -0.88
Clk4-203ENSMUST00000109113 Ccdc180J3QNE4 1664 aa9.56□□□□□ -0.88
Clk4-203ENSMUST00000109113 Krtap10-4Q08EG8 221 aa9.56□□□□□ -0.88
Clk4-203ENSMUST00000109113 Baz1aO88379 1555 aa9.55□□□□□ -0.88
Clk4-203ENSMUST00000109113 Iqgap2Q3UQ44 1575 aa9.55□□□□□ -0.88
Clk4-203ENSMUST00000109113 Wdr62Q3U3T8 1523 aa9.55□□□□□ -0.88
Clk4-203ENSMUST00000109113 LsrQ99KG5 594 aa9.55□□□□□ -0.88
Clk4-203ENSMUST00000109113 Smarca4Q3TKT4 1613 aaKnown RBP9.54□□□□□ -0.88
Clk4-203ENSMUST00000109113 TimelessQ9R1X4 1197 aa9.54□□□□□ -0.88
Clk4-203ENSMUST00000109113 Phldb1Q6PDH0 1371 aaKnown RBP9.52□□□□□ -0.88
Clk4-203ENSMUST00000109113 Nfxl1E9Q8I7 918 aaKnown RBP9.52□□□□□ -0.89
Clk4-203ENSMUST00000109113 Spata31d1aE9QA35 1336 aa9.51□□□□□ -0.89
Clk4-203ENSMUST00000109113 Mrc2Q64449 1479 aa9.5□□□□□ -0.89
Clk4-203ENSMUST00000109113 GcgrQ61606 485 aa9.49□□□□□ -0.89
Clk4-203ENSMUST00000109113 Ppp6r1Q7TSI3 856 aa9.49□□□□□ -0.89
Clk4-203ENSMUST00000109113 Frmpd1A2AKB4 1549 aa9.49□□□□□ -0.89
Clk4-203ENSMUST00000109113 Traf7Q922B6 594 aa9.48□□□□□ -0.89
Clk4-203ENSMUST00000109113 Stk3Q9JI10 497 aa9.48□□□□□ -0.89
Clk4-203ENSMUST00000109113 Fam221bQ8C627 487 aa9.47□□□□□ -0.89
Clk4-203ENSMUST00000109113 FurinP23188 793 aa9.46□□□□□ -0.89
Clk4-203ENSMUST00000109113 Rem2Q8VEL9 341 aa9.44□□□□□ -0.9
Clk4-203ENSMUST00000109113 Zcchc6Q5BLK4 1491 aaKnown RBP9.43□□□□□ -0.9
Clk4-203ENSMUST00000109113 Lrrc14bQ3UJB3 510 aa9.42□□□□□ -0.9
Clk4-203ENSMUST00000109113 Emp3O35912 163 aa9.42□□□□□ -0.9
Clk4-203ENSMUST00000109113 Pdcd7Q9WTY1 482 aa9.42□□□□□ -0.9
Clk4-203ENSMUST00000109113 Vars2Q3U2A8 1060 aa9.41□□□□□ -0.9
Clk4-203ENSMUST00000109113 Suv39h2Q9EQQ0 477 aa9.41□□□□□ -0.9
Clk4-203ENSMUST00000109113 Unc13aQ4KUS2 1712 aa9.4□□□□□ -0.9
Clk4-203ENSMUST00000109113 Cypt1Q8CH20 168 aa9.39□□□□□ -0.91
Clk4-203ENSMUST00000109113 Erbb4Q61527 1308 aa9.38□□□□□ -0.91
Clk4-203ENSMUST00000109113 Gm3250E9Q1M3 230 aa9.37□□□□□ -0.91
Clk4-203ENSMUST00000109113 Mre11Q61216 706 aa9.37□□□□□ -0.91
Clk4-203ENSMUST00000109113 Sirt1Q923E4 737 aa9.36□□□□□ -0.91
Clk4-203ENSMUST00000109113 Ubl4bQ9CQ84 188 aa9.36□□□□□ -0.91
Clk4-203ENSMUST00000109113 Shroom2A2ALU4 1481 aa9.36□□□□□ -0.91
Clk4-203ENSMUST00000109113 Lrriq1Q0P5X1 1673 aa9.35□□□□□ -0.91
Clk4-203ENSMUST00000109113 Ube2uB1AUC4 352 aa9.34□□□□□ -0.91
Clk4-203ENSMUST00000109113 Mier1Q5UAK0 511 aa9.34□□□□□ -0.91
Clk4-203ENSMUST00000109113 Stk24Q99KH8 431 aa9.34□□□□□ -0.91
Clk4-203ENSMUST00000109113 Zbtb22Q9Z0G7 638 aa9.33□□□□□ -0.92
Clk4-203ENSMUST00000109113 Ecm2Q5FW85 670 aa9.32□□□□□ -0.92
Clk4-203ENSMUST00000109113 Rsph6aQ8CDR2 708 aa9.32□□□□□ -0.92
Clk4-203ENSMUST00000109113 Rbm33Q9CXK9 1231 aaKnown RBP9.31□□□□□ -0.92
Clk4-203ENSMUST00000109113 Inpp5dQ9ES52 1191 aa9.31□□□□□ -0.92
Clk4-203ENSMUST00000109113 Cecr2E9Q2Z1 1453 aa9.31□□□□□ -0.92
Clk4-203ENSMUST00000109113 Rsf1E9PWW9 1441 aaKnown RBP9.3□□□□□ -0.92
Clk4-203ENSMUST00000109113 Erich4Q3UNU4 136 aa9.29□□□□□ -0.92
Clk4-203ENSMUST00000109113 JmyQ9QXM1 983 aa9.28□□□□□ -0.92
Clk4-203ENSMUST00000109113 Col17a1Q07563 1470 aa9.27□□□□□ -0.93
Clk4-203ENSMUST00000109113 Wfs1P56695 890 aa9.27□□□□□ -0.93
Clk4-203ENSMUST00000109113 Pcdhb20Q91XZ9 799 aa9.27□□□□□ -0.93
Clk4-203ENSMUST00000109113 Stk25Q9Z2W1 426 aa9.27□□□□□ -0.93
Clk4-203ENSMUST00000109113 Gm4788E9Q8B5 879 aa9.26□□□□□ -0.93
Clk4-203ENSMUST00000109113 Eif4g3Q80XI3 1579 aaKnown RBP9.24□□□□□ -0.93
Clk4-203ENSMUST00000109113 Mllt6B1AR10 1109 aa9.23□□□□□ -0.93
Clk4-203ENSMUST00000109113 Rgl2Q61193 778 aa9.23□□□□□ -0.93
Clk4-203ENSMUST00000109113 Skiv2lQ6NZR5 1244 aa9.23□□□□□ -0.93
Clk4-203ENSMUST00000109113 MetrnQ8C1Q4 291 aa9.21□□□□□ -0.93
Clk4-203ENSMUST00000109113 Slc4a2P13808 1237 aaKnown RBP9.2□□□□□ -0.94
Clk4-203ENSMUST00000109113 Kcnc4Q8R1C0 628 aa9.17□□□□□ -0.94
Clk4-203ENSMUST00000109113 Kif21aQ9QXL2 1672 aa9.17□□□□□ -0.94
Clk4-203ENSMUST00000109113 Slc12a5Q91V14 1138 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 46.2 ms