RNA–Protein interactions for RNA: ENSMUST00000105413.7

Col6a2-202, Transcript of Collagen alpha-2(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a2, Length 4,653 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2-202ENSMUST00000105413 Exosc9Q9JHI7 438 aaKnown RBP17.8■□□□□ 0.44
Col6a2-202ENSMUST00000105413 Arhgef5E9Q7D5 1581 aa17.79■□□□□ 0.44
Col6a2-202ENSMUST00000105413 Tcerg1Q8CGF7 1100 aaKnown RBP17.79■□□□□ 0.44
Col6a2-202ENSMUST00000105413 Ccdc9Q8VC31 543 aaKnown RBP17.79■□□□□ 0.44
Col6a2-202ENSMUST00000105413 Supt16hQ920B9 1047 aa17.79■□□□□ 0.44
Col6a2-202ENSMUST00000105413 Map3k1P53349 1493 aa17.79■□□□□ 0.44
Col6a2-202ENSMUST00000105413 Hsp90ab1P11499 724 aaKnown RBP17.79■□□□□ 0.44
Col6a2-202ENSMUST00000105413 Cnga1P29974 684 aa17.78■□□□□ 0.44
Col6a2-202ENSMUST00000105413 Mak16Q8BGS0 296 aaKnown RBP17.78■□□□□ 0.44
Col6a2-202ENSMUST00000105413 Dbr1Q923B1 550 aa17.77■□□□□ 0.44
Col6a2-202ENSMUST00000105413 Stag3O70576 1240 aa17.77■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Frmpd1A2AKB4 1549 aa17.77■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Grin2bQ01097 1482 aa17.76■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Vps8Q0P5W1 1427 aa17.75■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Ccdc27Q3V036 639 aa17.75■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Rad54l2Q99NG0 1466 aa17.75■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Mroh2bQ7M6Y6 1581 aa17.75■□□□□ 0.43
Col6a2-202ENSMUST00000105413 B4galnt3Q6L8S8 986 aa17.75■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Tmf1B9EKI3 1091 aa17.75■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Rwdd1Q9CQK7 243 aa17.74■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Duox2A2AQ99 1517 aa17.74■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Sart1Q9Z315 806 aaKnown RBP17.73■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Arid3cA6PWV5 409 aa17.73■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Cux1P53564 1515 aa17.72■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Nolc1E9Q5C9 702 aaKnown RBP17.71■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Gtf2e1Q9D0D5 440 aa17.71■□□□□ 0.43
Col6a2-202ENSMUST00000105413 Rock2P70336 1388 aa17.7■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Speer4f1Q9D5Q6 258 aa17.69■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Srcin1Q9QWI6 1250 aa17.69■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Mbd3Q9Z2D8 285 aaKnown RBP17.69■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Bcl11aQ9QYE3 773 aa17.68■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Mapk8ip3Q9ESN9 1337 aa17.68■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Znf710Q3U288 666 aa17.68■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Tiam1Q60610 1591 aa17.68■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Zfp644E9QA22 1323 aa17.68■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Tdrd9Q14BI7 1383 aa17.67■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Lemd3Q9WU40 921 aa17.66■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Polr1aO35134 1717 aaKnown RBP17.66■□□□□ 0.42
Col6a2-202ENSMUST00000105413 PogzQ8BZH4 1409 aaKnown RBP17.66■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Ppm1gQ61074 542 aa17.66■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Fgd1P52734 960 aa17.66■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Cc2d2bA0A286YDU8 1405 aa17.65■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Dapk1Q80YE7 1442 aa17.65■□□□□ 0.42
Col6a2-202ENSMUST00000105413 Chmp5Q9D7S9 219 aa17.64■□□□□ 0.41
Col6a2-202ENSMUST00000105413 Kif3bQ61771 747 aa17.64■□□□□ 0.41
Col6a2-202ENSMUST00000105413 Slc4a1apE9PX68 744 aa17.63■□□□□ 0.41
Col6a2-202ENSMUST00000105413 Dcaf11Q91VU6 549 aa17.63■□□□□ 0.41
Col6a2-202ENSMUST00000105413 Armcx1Q9CX83 456 aa17.63■□□□□ 0.41
Col6a2-202ENSMUST00000105413 Pank3Q8R2W9 370 aa17.61■□□□□ 0.41
Col6a2-202ENSMUST00000105413 CrbnQ8C7D2 445 aa17.6■□□□□ 0.41
Col6a2-202ENSMUST00000105413 Gm6268A2A3U9 297 aa17.59■□□□□ 0.41
Col6a2-202ENSMUST00000105413 Jph4Q80WT0 628 aa17.58■□□□□ 0.41
Col6a2-202ENSMUST00000105413 Camsap1A2AHC3 1581 aa17.58■□□□□ 0.4
Col6a2-202ENSMUST00000105413 DekQ7TNV0 380 aaKnown RBP17.57■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Golga2Q921M4 999 aa17.57■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Ift140E9PY46 1464 aa17.57■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Inpp5dQ9ES52 1191 aa17.56■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Stk26Q99JT2 416 aa17.56■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Wdr62Q3U3T8 1523 aa17.55■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Arid4bA2CG63 1314 aaKnown RBP17.55■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Vsig10D3YX43 558 aa17.54■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Gm7298A0A0N4SVU1 1476 aa17.54■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Htatsf1Q8BGC0 757 aa17.54■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Fan1Q69ZT1 1020 aa17.53■□□□□ 0.4
Col6a2-202ENSMUST00000105413 EspnQ9ET47 871 aa17.53■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Spag9Q58A65 1321 aaKnown RBP17.53■□□□□ 0.4
Col6a2-202ENSMUST00000105413 NudcO35685 332 aaKnown RBP17.53■□□□□ 0.4
Col6a2-202ENSMUST00000105413 U2af1Q9D883 239 aaKnown RBP17.53■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Ipo9Q91YE6 1041 aa17.52■□□□□ 0.4
Col6a2-202ENSMUST00000105413 Ncoa2Q61026 1462 aa17.52■□□□□ 0.39
Col6a2-202ENSMUST00000105413 Urb2E9Q7L1 1524 aaKnown RBP17.5■□□□□ 0.39
Col6a2-202ENSMUST00000105413 Lamc3Q9R0B6 1581 aa17.5■□□□□ 0.39
Col6a2-202ENSMUST00000105413 Slc4a2P13808 1237 aaKnown RBP17.5■□□□□ 0.39
Col6a2-202ENSMUST00000105413 CadpsQ80TJ1 1355 aa17.49■□□□□ 0.39
Col6a2-202ENSMUST00000105413 EprsQ8CGC7 1512 aaKnown RBP17.48■□□□□ 0.39
Col6a2-202ENSMUST00000105413 AqrQ8CFQ3 1481 aaKnown RBP17.48■□□□□ 0.39
Col6a2-202ENSMUST00000105413 Map7O88735 730 aa17.48■□□□□ 0.39
Col6a2-202ENSMUST00000105413 Irx6Q9ER75 438 aa17.48■□□□□ 0.39
Col6a2-202ENSMUST00000105413 Stard8Q8K031 1019 aa17.47■□□□□ 0.39
Col6a2-202ENSMUST00000105413 Dnai1Q8C0M8 701 aa17.47■□□□□ 0.39
Col6a2-202ENSMUST00000105413 Pcf11G3X9Z4 1553 aa17.46■□□□□ 0.39
Col6a2-202ENSMUST00000105413 MyclP10166 368 aa17.46■□□□□ 0.39
Col6a2-202ENSMUST00000105413 NgefQ8CHT1 710 aa17.46■□□□□ 0.39
Col6a2-202ENSMUST00000105413 Rock1P70335 1354 aa17.46■□□□□ 0.39
Col6a2-202ENSMUST00000105413 1700019A02RikA0A087WPV9 146 aa17.46■□□□□ 0.39
Col6a2-202ENSMUST00000105413 Rpgrip1lQ8CG73 1264 aa17.46■□□□□ 0.39
Col6a2-202ENSMUST00000105413 Arhgap31A6X8Z5 1425 aa17.45■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Esx1O88933 382 aa17.45■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Zscan10Q3URR7 782 aa17.45■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Fam184bQ0KK56 942 aa17.45■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Naip2Q9QUK4 1447 aa17.44■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Ecm2Q5FW85 670 aa17.44■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Chmp4bQ9D8B3 224 aaKnown RBP17.44■□□□□ 0.38
Col6a2-202ENSMUST00000105413 PnisrA2AJT4 805 aaKnown RBP17.44■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Plcb2A3KGF7 1181 aa17.43■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Iqcf3Q9D498 203 aa17.43■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Trim44Q9QXA7 346 aa17.43■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Ttll5Q8CHB8 1328 aa17.43■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Soga1E1U8D0 1418 aa17.41■□□□□ 0.38
Col6a2-202ENSMUST00000105413 Irx3P81067 507 aa17.41■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms