RNA–Protein interactions for RNA: ENSMUST00000103571.1

Trav6-1-201, Transcript of T cell receptor alpha variable 6-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav6-1, Length 338 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1-201ENSMUST00000103571 Ncoa1P70365 1447 aa9.68□□□□□ -0.86
Trav6-1-201ENSMUST00000103571 Cfap65Q3V0B4 1847 aa9.67□□□□□ -0.86
Trav6-1-201ENSMUST00000103571 Slc34a2Q9DBP0 697 aa9.65□□□□□ -0.86
Trav6-1-201ENSMUST00000103571 Yeats2Q3TUF7 1407 aa9.65□□□□□ -0.87
Trav6-1-201ENSMUST00000103571 Polr1aO35134 1717 aaKnown RBP9.64□□□□□ -0.87
Trav6-1-201ENSMUST00000103571 OvosQ3UU35 1456 aa9.64□□□□□ -0.87
Trav6-1-201ENSMUST00000103571 Topaz1E5FYH1 1653 aa9.63□□□□□ -0.87
Trav6-1-201ENSMUST00000103571 4930407I10RikD3Z5T8 1512 aa9.62□□□□□ -0.87
Trav6-1-201ENSMUST00000103571 Synj2Q9D2G5 1434 aa9.62□□□□□ -0.87
Trav6-1-201ENSMUST00000103571 Arhgap31A6X8Z5 1425 aa9.61□□□□□ -0.87
Trav6-1-201ENSMUST00000103571 Gcc2Q8CHG3 1679 aa9.61□□□□□ -0.87
Trav6-1-201ENSMUST00000103571 Gli3Q61602 1583 aa9.6□□□□□ -0.87
Trav6-1-201ENSMUST00000103571 Iqsec2Q5DU25 1478 aa9.59□□□□□ -0.87
Trav6-1-201ENSMUST00000103571 NpatQ8BMA5 1420 aa9.59□□□□□ -0.87
Trav6-1-201ENSMUST00000103571 Npm2Q80W85 207 aa9.59□□□□□ -0.87
Trav6-1-201ENSMUST00000103571 Mroh2aD3Z750 1679 aa9.58□□□□□ -0.88
Trav6-1-201ENSMUST00000103571 Ptch1Q61115 1434 aa9.57□□□□□ -0.88
Trav6-1-201ENSMUST00000103571 Phf23Q8BSN5 401 aa9.57□□□□□ -0.88
Trav6-1-201ENSMUST00000103571 Mlh3A0A1Y7VMP7 1443 aa9.56□□□□□ -0.88
Trav6-1-201ENSMUST00000103571 Abca9Q8K449 1623 aa9.56□□□□□ -0.88
Trav6-1-201ENSMUST00000103571 Ccdc141E9Q8Q6 1531 aa9.56□□□□□ -0.88
Trav6-1-201ENSMUST00000103571 Mroh2bQ7M6Y6 1581 aa9.52□□□□□ -0.89
Trav6-1-201ENSMUST00000103571 Zranb1Q7M760 708 aa9.52□□□□□ -0.89
Trav6-1-201ENSMUST00000103571 Abca6Q8K441 1624 aa9.52□□□□□ -0.89
Trav6-1-201ENSMUST00000103571 Arhgef40Q3UPH7 1517 aa9.51□□□□□ -0.89
Trav6-1-201ENSMUST00000103571 Cypt2Q6P924 180 aa9.51□□□□□ -0.89
Trav6-1-201ENSMUST00000103571 Afap1Q80YS6 731 aa9.51□□□□□ -0.89
Trav6-1-201ENSMUST00000103571 Kiaa0556Q8C753 1610 aa9.51□□□□□ -0.89
Trav6-1-201ENSMUST00000103571 Nyap1Q6PFX7 833 aa9.49□□□□□ -0.89
Trav6-1-201ENSMUST00000103571 Dip2cE9PWR4 1557 aa9.48□□□□□ -0.89
Trav6-1-201ENSMUST00000103571 Gemin5Q8BX17 1502 aaKnown RBP9.46□□□□□ -0.89
Trav6-1-201ENSMUST00000103571 AlkP97793 1621 aa9.46□□□□□ -0.89
Trav6-1-201ENSMUST00000103571 Carmil1Q6EDY6 1374 aa9.46□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Fancd2Q80V62 1450 aa9.46□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Dip2bQ3UH60 1574 aa9.46□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Rapgef3Q8VCC8 918 aa9.44□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Prex2Q3LAC4 1598 aa9.44□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 RereQ80TZ9 1558 aa9.44□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Hecw1Q8K4P8 1604 aa9.44□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Slit2Q9R1B9 1521 aa9.43□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Lemd3Q9WU40 921 aa9.43□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Kiaa1210E9Q0C6 1637 aa9.42□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Med1Q925J9 1575 aa9.42□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Rapgef6Q5NCJ1 1609 aa9.42□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Ankrd26Q811D2 1581 aa9.41□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Zmym4A2A791 1549 aaKnown RBP9.41□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Cux1P53564 1515 aa9.41□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Myom2Q14BI5 1463 aa9.41□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 MpndQ3TV65 487 aa9.41□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Phlpp1Q8CHE4 1687 aa9.41□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Map3k1P53349 1493 aa9.4□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Dennd4bQ3U1Y4 1499 aa9.4□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Arhgap23Q69ZH9 1483 aa9.4□□□□□ -0.9
Trav6-1-201ENSMUST00000103571 Talpid3E9PV87 1520 aa9.39□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Rims2Q9EQZ7 1530 aa9.38□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Gab3Q8BSM5 595 aa9.38□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Zc3h13E9Q784 1729 aaKnown RBP9.37□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Arhgap35Q91YM2 1499 aa9.37□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 CltcQ68FD5 1675 aaKnown RBP9.36□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Erich3F6QRE9 1637 aa9.36□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Rimbp3Q3V0F0 1606 aa9.36□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Scaf11E9PZM7 1456 aaKnown RBP9.35□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Kidins220E9Q9B7 1793 aa9.35□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Rgs17Q9QZB0 210 aa9.35□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Ncapd3Q6ZQK0 1506 aa9.35□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Magi1Q6RHR9 1471 aa9.34□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Tom1O88746 492 aa9.34□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Myt1lP97500 1187 aa9.34□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Ncoa2Q61026 1462 aa9.34□□□□□ -0.91
Trav6-1-201ENSMUST00000103571 Gm13697A2AK42 830 aa9.33□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Rapgefl1Q68EF8 662 aa9.33□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Clip1Q922J3 1391 aa9.33□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Fyco1Q8VDC1 1437 aa9.32□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Arap1Q4LDD4 1452 aa9.32□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Tubgcp6G5E8P0 1769 aa9.32□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Kdm2bQ6P1G2 1309 aa9.31□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Amigo3Q8C2S7 508 aa9.31□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Kdm5cP41230 1554 aa9.3□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Kdm3bQ6ZPY7 1562 aa9.3□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Sema6bO54951 886 aa9.3□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Dmrt2Q8BG36 561 aa9.3□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 GphnQ8BUV3 769 aaKnown RBP9.3□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Arhgap5P97393 1501 aa9.3□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 BlmO88700 1416 aa9.29□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 NinlQ6ZQ12 1394 aa9.28□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 PzpQ61838 1495 aa9.28□□□□□ -0.92
Trav6-1-201ENSMUST00000103571 Fam208aQ69ZR9 1610 aaKnown RBP9.27□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 Trpm2Q91YD4 1506 aa9.26□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 Kif27Q7M6Z4 1394 aa9.26□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 Ncoa3O09000 1398 aa9.25□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 RictorQ6QI06 1708 aa9.25□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 Slc5a4bQ91ZP4 660 aa9.25□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 DroshaQ5HZJ0 1373 aaKnown RBP9.24□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 Trappc8E9PWG2 1437 aa9.24□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 Bcl9Q9D219 1425 aa9.24□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 Aebp1Q640N1 1128 aa9.24□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 Arid4bA2CG63 1314 aaKnown RBP9.24□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 Gimap5Q8BWF2 308 aa9.23□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 Cep162Q6ZQ06 1403 aa9.22□□□□□ -0.93
Trav6-1-201ENSMUST00000103571 Fnbp4Q6ZQ03 1031 aa9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms