RNA–Protein interactions for RNA: ENSMUST00000094646.5

Vps4b-201, Transcript of Vacuolar protein sorting-associated protein 4B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4b, Length 4,633 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4b-201ENSMUST00000094646 Htatsf1Q8BGC0 757 aa16.58■□□□□ 0.24
Vps4b-201ENSMUST00000094646 Lmod3E9QA62 571 aa16.57■□□□□ 0.24
Vps4b-201ENSMUST00000094646 Chmp4bQ9D8B3 224 aaKnown RBP16.57■□□□□ 0.24
Vps4b-201ENSMUST00000094646 Cecr2E9Q2Z1 1453 aa16.57■□□□□ 0.24
Vps4b-201ENSMUST00000094646 CatipB9EKE5 520 aa16.57■□□□□ 0.24
Vps4b-201ENSMUST00000094646 Zfp777B9EKF4 885 aa16.57■□□□□ 0.24
Vps4b-201ENSMUST00000094646 Speer4f1Q9D5Q6 258 aa16.56■□□□□ 0.24
Vps4b-201ENSMUST00000094646 Zscan21Q07231 555 aa16.55■□□□□ 0.24
Vps4b-201ENSMUST00000094646 Nolc1E9Q5C9 702 aaKnown RBP16.55■□□□□ 0.24
Vps4b-201ENSMUST00000094646 Map7O88735 730 aa16.54■□□□□ 0.24
Vps4b-201ENSMUST00000094646 Ecm2Q5FW85 670 aa16.54■□□□□ 0.24
Vps4b-201ENSMUST00000094646 Arhgap35Q91YM2 1499 aa16.54■□□□□ 0.24
Vps4b-201ENSMUST00000094646 PtmaP26350 111 aa16.53■□□□□ 0.24
Vps4b-201ENSMUST00000094646 Tmf1B9EKI3 1091 aa16.52■□□□□ 0.24
Vps4b-201ENSMUST00000094646 Plin1Q8CGN5 517 aa16.52■□□□□ 0.23
Vps4b-201ENSMUST00000094646 Chmp5Q9D7S9 219 aa16.51■□□□□ 0.23
Vps4b-201ENSMUST00000094646 Rapgef2Q8CHG7 1496 aa16.5■□□□□ 0.23
Vps4b-201ENSMUST00000094646 U2af1Q9D883 239 aaKnown RBP16.49■□□□□ 0.23
Vps4b-201ENSMUST00000094646 Dcaf11Q91VU6 549 aa16.49■□□□□ 0.23
Vps4b-201ENSMUST00000094646 Kif3bQ61771 747 aa16.49■□□□□ 0.23
Vps4b-201ENSMUST00000094646 Mak16Q8BGS0 296 aaKnown RBP16.49■□□□□ 0.23
Vps4b-201ENSMUST00000094646 Mbd3Q9Z2D8 285 aaKnown RBP16.49■□□□□ 0.23
Vps4b-201ENSMUST00000094646 Carmil1Q6EDY6 1374 aa16.48■□□□□ 0.23
Vps4b-201ENSMUST00000094646 Tcerg1Q8CGF7 1100 aaKnown RBP16.48■□□□□ 0.23
Vps4b-201ENSMUST00000094646 Hsp90b1P08113 802 aaKnown RBP16.48■□□□□ 0.23
Vps4b-201ENSMUST00000094646 U2surpQ6NV83 1029 aaKnown RBP16.48■□□□□ 0.23
Vps4b-201ENSMUST00000094646 Srcin1Q9QWI6 1250 aa16.47■□□□□ 0.23
Vps4b-201ENSMUST00000094646 Znf326O88291 580 aa16.46■□□□□ 0.23
Vps4b-201ENSMUST00000094646 Nup155Q99P88 1391 aaKnown RBP16.45■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Birc3O08863 600 aa16.45■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Tmco5bQ80X59 307 aa16.44■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Phldb1Q6PDH0 1371 aaKnown RBP16.44■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Spryd3E9Q9B3 442 aa16.44■□□□□ 0.22
Vps4b-201ENSMUST00000094646 KnstrnQ9D9Z1 312 aaKnown RBP16.44■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Pes1Q9EQ61 584 aaKnown RBP16.43■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Sart1Q9Z315 806 aaKnown RBP16.43■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Rtf1A2AQ19 715 aaKnown RBP16.43■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Golga2Q921M4 999 aa16.42■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Smarca2Q6DIC0 1577 aa16.41■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Rock2P70336 1388 aa16.41■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Ccnb3Q810T2 1396 aa16.41■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Irx3P81067 507 aa16.41■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Dhx57Q6P5D3 1388 aaKnown RBP16.41■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Znf316Q6PGE4 1016 aa16.4■□□□□ 0.22
Vps4b-201ENSMUST00000094646 Plekhh2Q8C115 1491 aa16.4■□□□□ 0.22
Vps4b-201ENSMUST00000094646 HnrnpuQ8VEK3 800 aaKnown RBP16.39■□□□□ 0.21
Vps4b-201ENSMUST00000094646 Synj1Q8CHC4 1574 aa16.39■□□□□ 0.21
Vps4b-201ENSMUST00000094646 Slc4a1apE9PX68 744 aa16.39■□□□□ 0.21
Vps4b-201ENSMUST00000094646 Txndc2Q6P902 515 aa16.39■□□□□ 0.21
Vps4b-201ENSMUST00000094646 LrpprcQ6PB66 1392 aaKnown RBP16.38■□□□□ 0.21
Vps4b-201ENSMUST00000094646 Atad2bE9Q166 1460 aaKnown RBP16.38■□□□□ 0.21
Vps4b-201ENSMUST00000094646 Cluap1Q8R3P7 413 aa16.37■□□□□ 0.21
Vps4b-201ENSMUST00000094646 Psme1P97371 249 aa16.37■□□□□ 0.21
Vps4b-201ENSMUST00000094646 Casc1Q6TDU8 730 aa16.37■□□□□ 0.21
Vps4b-201ENSMUST00000094646 Fan1Q69ZT1 1020 aa16.36■□□□□ 0.21
Vps4b-201ENSMUST00000094646 CrbnQ8C7D2 445 aa16.36■□□□□ 0.21
Vps4b-201ENSMUST00000094646 Clstn1Q9EPL2 979 aa16.36■□□□□ 0.21
Vps4b-201ENSMUST00000094646 Sox12Q04890 314 aa16.35■□□□□ 0.21
Vps4b-201ENSMUST00000094646 Znf330Q922H9 316 aa16.35■□□□□ 0.21
Vps4b-201ENSMUST00000094646 EspnQ9ET47 871 aa16.34■□□□□ 0.21
Vps4b-201ENSMUST00000094646 Senp3Q9EP97 568 aaKnown RBP16.33■□□□□ 0.21
Vps4b-201ENSMUST00000094646 PnnO35691 725 aaKnown RBP16.33■□□□□ 0.2
Vps4b-201ENSMUST00000094646 Q3TQI7 289 aaKnown RBP16.33■□□□□ 0.2
Vps4b-201ENSMUST00000094646 Sart3Q9JLI8 962 aaKnown RBP16.32■□□□□ 0.2
Vps4b-201ENSMUST00000094646 Dnai1Q8C0M8 701 aa16.31■□□□□ 0.2
Vps4b-201ENSMUST00000094646 MccE9PWI3 1003 aa16.31■□□□□ 0.2
Vps4b-201ENSMUST00000094646 Tnnt1O88346 262 aa16.3■□□□□ 0.2
Vps4b-201ENSMUST00000094646 Sh3bp5Q9Z131 463 aa16.3■□□□□ 0.2
Vps4b-201ENSMUST00000094646 Usp47Q8BY87 1376 aa16.3■□□□□ 0.2
Vps4b-201ENSMUST00000094646 Dhx29Q6PGC1 1365 aaKnown RBP16.3■□□□□ 0.2
Vps4b-201ENSMUST00000094646 Ksr2Q3UVC0 959 aa16.3■□□□□ 0.2
Vps4b-201ENSMUST00000094646 UacaQ8CGB3 1411 aa16.3■□□□□ 0.2
Vps4b-201ENSMUST00000094646 Utp14aQ640M1 767 aaKnown RBP16.29■□□□□ 0.2
Vps4b-201ENSMUST00000094646 PrkcshO08795 521 aa16.28■□□□□ 0.2
Vps4b-201ENSMUST00000094646 Rassf8Q8CJ96 419 aa16.27■□□□□ 0.19
Vps4b-201ENSMUST00000094646 WrnO09053 1401 aa16.26■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Pank3Q8R2W9 370 aa16.26■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Ipo9Q91YE6 1041 aa16.26■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Pibf1E9Q6K3 756 aa16.26■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Stard8Q8K031 1019 aa16.25■□□□□ 0.19
Vps4b-201ENSMUST00000094646 ChgaP26339 463 aaKnown RBP16.25■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Smarca4Q3TKT4 1613 aaKnown RBP16.24■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Znf710Q3U288 666 aa16.24■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Spag9Q58A65 1321 aaKnown RBP16.23■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Inpp5dQ9ES52 1191 aa16.22■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Mfap1aC0HKD8 439 aaKnown RBP16.22■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Mfap1bC0HKD9 439 aaKnown RBP16.22■□□□□ 0.19
Vps4b-201ENSMUST00000094646 MlecQ6ZQI3 291 aaKnown RBP16.22■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Ccar1Q8CH18 1146 aaKnown RBP16.22■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Tsen2Q6P7W5 460 aa16.21■□□□□ 0.19
Vps4b-201ENSMUST00000094646 Ggt6Q6PDE7 497 aa16.21■□□□□ 0.19
Vps4b-201ENSMUST00000094646 CenpjQ569L8 1344 aa16.21■□□□□ 0.18
Vps4b-201ENSMUST00000094646 Ipo8Q7TMY7 1010 aa16.2■□□□□ 0.18
Vps4b-201ENSMUST00000094646 Smg6P61406 1418 aaKnown RBP16.2■□□□□ 0.18
Vps4b-201ENSMUST00000094646 GorabQ8BRM2 368 aa16.2■□□□□ 0.18
Vps4b-201ENSMUST00000094646 Tdrd9Q14BI7 1383 aa16.19■□□□□ 0.18
Vps4b-201ENSMUST00000094646 Rsph4aQ8BYM7 716 aa16.19■□□□□ 0.18
Vps4b-201ENSMUST00000094646 HdgfP51859 237 aaKnown RBP16.18■□□□□ 0.18
Vps4b-201ENSMUST00000094646 Pde3bQ61409 1100 aa16.18■□□□□ 0.18
Vps4b-201ENSMUST00000094646 Eif4g2Q62448 906 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms