RNA–Protein interactions for RNA: ENSMUST00000088973.10

Smarca1-202, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-202ENSMUST00000088973 Plin1Q8CGN5 517 aa12.83□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Fyco1Q8VDC1 1437 aa12.82□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Mbd3Q9Z2D8 285 aaKnown RBP12.82□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Znf326O88291 580 aa12.81□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Mak16Q8BGS0 296 aaKnown RBP12.81□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Pds5bQ4VA53 1446 aaKnown RBP12.81□□□□□ -0.36
Smarca1-202ENSMUST00000088973 U2af1Q9D883 239 aaKnown RBP12.8□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Rpap1Q80TE0 1409 aa12.8□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Tmf1B9EKI3 1091 aa12.8□□□□□ -0.36
Smarca1-202ENSMUST00000088973 AknaQ80VW7 1404 aa12.8□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Pes1Q9EQ61 584 aaKnown RBP12.8□□□□□ -0.36
Smarca1-202ENSMUST00000088973 U2surpQ6NV83 1029 aaKnown RBP12.8□□□□□ -0.36
Smarca1-202ENSMUST00000088973 KnstrnQ9D9Z1 312 aaKnown RBP12.8□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Lemd3Q9WU40 921 aa12.79□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Tmco5bQ80X59 307 aa12.78□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Dcaf11Q91VU6 549 aa12.78□□□□□ -0.36
Smarca1-202ENSMUST00000088973 Casc1Q6TDU8 730 aa12.78□□□□□ -0.36
Smarca1-202ENSMUST00000088973 CntlnA2AM05 1397 aa12.77□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Ppp1r18Q8BQ30 594 aa12.77□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Baz1bQ9Z277 1479 aa12.77□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Srcin1Q9QWI6 1250 aa12.76□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Birc3O08863 600 aa12.75□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Cluap1Q8R3P7 413 aa12.75□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Golga2Q921M4 999 aa12.75□□□□□ -0.37
Smarca1-202ENSMUST00000088973 HnrnpuQ8VEK3 800 aaKnown RBP12.74□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Rtf1A2AQ19 715 aaKnown RBP12.74□□□□□ -0.37
Smarca1-202ENSMUST00000088973 PnnO35691 725 aaKnown RBP12.74□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Dnai1Q8C0M8 701 aa12.74□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Clstn1Q9EPL2 979 aa12.74□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Arhgap35Q91YM2 1499 aa12.74□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Kif3bQ61771 747 aa12.73□□□□□ -0.37
Smarca1-202ENSMUST00000088973 EspnQ9ET47 871 aa12.73□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Znf330Q922H9 316 aa12.72□□□□□ -0.37
Smarca1-202ENSMUST00000088973 Cux2P70298 1426 aa12.72□□□□□ -0.37
Smarca1-202ENSMUST00000088973 CrbnQ8C7D2 445 aa12.71□□□□□ -0.38
Smarca1-202ENSMUST00000088973 CftrP26361 1476 aa12.7□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Slc4a1apE9PX68 744 aa12.7□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Znf316Q6PGE4 1016 aa12.7□□□□□ -0.38
Smarca1-202ENSMUST00000088973 MccE9PWI3 1003 aa12.7□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Senp3Q9EP97 568 aaKnown RBP12.7□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Nup155Q99P88 1391 aaKnown RBP12.7□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Rock2P70336 1388 aa12.69□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Irx3P81067 507 aa12.69□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Sh3bp5Q9Z131 463 aa12.69□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Sart3Q9JLI8 962 aaKnown RBP12.68□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Rapgef2Q8CHG7 1496 aa12.68□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Sart1Q9Z315 806 aaKnown RBP12.68□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Q3TQI7 289 aaKnown RBP12.67□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Rassf8Q8CJ96 419 aa12.66□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Ksr2Q3UVC0 959 aa12.66□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Cecr2E9Q2Z1 1453 aa12.66□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Carmil1Q6EDY6 1374 aa12.66□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Tnnt1O88346 262 aa12.66□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Txndc2Q6P902 515 aa12.66□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Sox12Q04890 314 aa12.66□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Fan1Q69ZT1 1020 aa12.66□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Ccnb3Q810T2 1396 aa12.65□□□□□ -0.38
Smarca1-202ENSMUST00000088973 Dnttip2Q8R2M2 758 aaKnown RBP12.65□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Psme1P97371 249 aa12.64□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Mfap1aC0HKD8 439 aaKnown RBP12.64□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Mfap1bC0HKD9 439 aaKnown RBP12.64□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Ipo8Q7TMY7 1010 aa12.63□□□□□ -0.39
Smarca1-202ENSMUST00000088973 GorabQ8BRM2 368 aa12.63□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Pibf1E9Q6K3 756 aa12.63□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Erich6bQ9D4S6 220 aa12.63□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Bcl11aQ9QYE3 773 aa12.62□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Sycp2Q9CUU3 1500 aa12.62□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Plekhh2Q8C115 1491 aa12.62□□□□□ -0.39
Smarca1-202ENSMUST00000088973 AU015836B2RUM3 263 aa12.62□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Ipo9Q91YE6 1041 aa12.62□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Dhx57Q6P5D3 1388 aaKnown RBP12.61□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Pcmtd1P59913 357 aa12.61□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Pank3Q8R2W9 370 aa12.61□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Utp14aQ640M1 767 aaKnown RBP12.6□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Anapc15P60007 132 aa12.6□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Usp47Q8BY87 1376 aa12.6□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Ccar1Q8CH18 1146 aaKnown RBP12.59□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Iffo2Q8R2V2 512 aa12.59□□□□□ -0.39
Smarca1-202ENSMUST00000088973 PtmsQ9D0J8 101 aaKnown RBP12.59□□□□□ -0.39
Smarca1-202ENSMUST00000088973 Spag9Q58A65 1321 aaKnown RBP12.58□□□□□ -0.4
Smarca1-202ENSMUST00000088973 MecomP14404 1042 aa12.58□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Nolc1E9Q5C9 702 aaKnown RBP12.58□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Pde3bQ61409 1100 aa12.58□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Inpp5dQ9ES52 1191 aa12.57□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Tsen2Q6P7W5 460 aa12.57□□□□□ -0.4
Smarca1-202ENSMUST00000088973 ChgaP26339 463 aaKnown RBP12.57□□□□□ -0.4
Smarca1-202ENSMUST00000088973 CgnP59242 1191 aa12.57□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Phldb1Q6PDH0 1371 aaKnown RBP12.57□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Smg6P61406 1418 aaKnown RBP12.56□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Stard8Q8K031 1019 aa12.56□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Adam1bQ8R534 806 aa12.56□□□□□ -0.4
Smarca1-202ENSMUST00000088973 LrpprcQ6PB66 1392 aaKnown RBP12.56□□□□□ -0.4
Smarca1-202ENSMUST00000088973 UacaQ8CGB3 1411 aa12.55□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Nol10Q5RJG1 687 aaKnown RBP12.54□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Eif4g2Q62448 906 aaKnown RBP12.54□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Crybg2B7ZCC2 1516 aa12.54□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Ggt6Q6PDE7 497 aa12.53□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Brpf1B2RRD7 1212 aa12.53□□□□□ -0.4
Smarca1-202ENSMUST00000088973 CenpjQ569L8 1344 aa12.53□□□□□ -0.4
Smarca1-202ENSMUST00000088973 Gm973E9Q295 1059 aa12.52□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 72.2 ms