RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 Cecr2E9Q2Z1 1453 aa17.72■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Rundc1Q0VDN7 615 aa17.72■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Synj1Q8CHC4 1574 aa17.72■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Atad2bE9Q166 1460 aaKnown RBP17.71■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Spryd3E9Q9B3 442 aa17.71■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Gm6268A2A3U9 297 aa17.7■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Arid3cA6PWV5 409 aa17.7■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Carmil1Q6EDY6 1374 aa17.69■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Lemd3Q9WU40 921 aa17.69■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Cabp1Q9JLK7 227 aa17.68■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Smarca4Q3TKT4 1613 aaKnown RBP17.68■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Mphosph9A6H5Y1 991 aa17.68■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Nolc1E9Q5C9 702 aaKnown RBP17.67■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Ifit1bl1D3Z6F0 470 aa17.67■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Trak1Q6PD31 939 aa17.66■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Gtf2e1Q9D0D5 440 aa17.66■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Map7O88735 730 aa17.65■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Ipo4Q8VI75 1082 aa17.64■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Mbd3Q9Z2D8 285 aaKnown RBP17.63■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Plekhh2Q8C115 1491 aa17.63■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Tmf1B9EKI3 1091 aa17.63■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Wwc2Q6NXJ0 1187 aa17.62■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Ipo9Q91YE6 1041 aa17.61■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Rapgef2Q8CHG7 1496 aa17.61■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Cttnbp2B9EJA2 1648 aa17.6■□□□□ 0.41
Col18a1-201ENSMUST00000072755 1700019A02RikA0A087WPV9 146 aa17.6■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Nup155Q99P88 1391 aaKnown RBP17.6■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Arid4bA2CG63 1314 aaKnown RBP17.59■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Htatsf1Q8BGC0 757 aa17.59■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Ppm1gQ61074 542 aa17.59■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Rwdd1Q9CQK7 243 aa17.58■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Slc4a3P16283 1227 aa17.58■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Stk26Q99JT2 416 aa17.57■□□□□ 0.4
Col18a1-201ENSMUST00000072755 4933402E13RikQ9D4D2 429 aa17.57■□□□□ 0.4
Col18a1-201ENSMUST00000072755 ScribQ80U72 1612 aa17.56■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Q8BT18 775 aa17.56■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Pdcl3Q8BVF2 240 aa17.56■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Rrp12Q6P5B0 1295 aaKnown RBP17.55■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Armcx1Q9CX83 456 aa17.55■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Dbr1Q923B1 550 aa17.54■□□□□ 0.4
Col18a1-201ENSMUST00000072755 PtmaP26350 111 aa17.54■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Rock2P70336 1388 aa17.54■□□□□ 0.4
Col18a1-201ENSMUST00000072755 LrpprcQ6PB66 1392 aaKnown RBP17.54■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Plcb2A3KGF7 1181 aa17.53■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Exoc6Q8R313 802 aa17.53■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Sin3aQ60520 1274 aaKnown RBP17.52■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Ccnb3Q810T2 1396 aa17.52■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Rtf1A2AQ19 715 aaKnown RBP17.52■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Psme1P97371 249 aa17.52■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Kif3bQ61771 747 aa17.51■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Speer4f1Q9D5Q6 258 aa17.51■□□□□ 0.39
Col18a1-201ENSMUST00000072755 KnstrnQ9D9Z1 312 aaKnown RBP17.5■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Rsph4aQ8BYM7 716 aa17.5■□□□□ 0.39
Col18a1-201ENSMUST00000072755 UacaQ8CGB3 1411 aa17.5■□□□□ 0.39
Col18a1-201ENSMUST00000072755 HnrnpuQ8VEK3 800 aaKnown RBP17.5■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Zscan21Q07231 555 aa17.49■□□□□ 0.39
Col18a1-201ENSMUST00000072755 B4galnt3Q6L8S8 986 aa17.48■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Hsp90b1P08113 802 aaKnown RBP17.47■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Fbxo2Q80UW2 297 aa17.47■□□□□ 0.39
Col18a1-201ENSMUST00000072755 TimelessQ9R1X4 1197 aa17.46■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Txndc2Q6P902 515 aa17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Dcaf11Q91VU6 549 aa17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Mak16Q8BGS0 296 aaKnown RBP17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 U2af1Q9D883 239 aaKnown RBP17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Pes1Q9EQ61 584 aaKnown RBP17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Srcin1Q9QWI6 1250 aa17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Dhx29Q6PGC1 1365 aaKnown RBP17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Sart1Q9Z315 806 aaKnown RBP17.44■□□□□ 0.38
Col18a1-201ENSMUST00000072755 U2surpQ6NV83 1029 aaKnown RBP17.44■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Stard8Q8K031 1019 aa17.43■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Golga2Q921M4 999 aa17.43■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Iqgap2Q3UQ44 1575 aa17.43■□□□□ 0.38
Col18a1-201ENSMUST00000072755 MccE9PWI3 1003 aa17.42■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Birc3O08863 600 aa17.4■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Erich6bQ9D4S6 220 aa17.4■□□□□ 0.38
Col18a1-201ENSMUST00000072755 MsnP26041 577 aaKnown RBP17.4■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Eif4g2Q62448 906 aaKnown RBP17.39■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Sart3Q9JLI8 962 aaKnown RBP17.39■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Tcerg1Q8CGF7 1100 aaKnown RBP17.38■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Plin1Q8CGN5 517 aa17.38■□□□□ 0.37
Col18a1-201ENSMUST00000072755 CenpjQ569L8 1344 aa17.38■□□□□ 0.37
Col18a1-201ENSMUST00000072755 PnnO35691 725 aaKnown RBP17.37■□□□□ 0.37
Col18a1-201ENSMUST00000072755 WrnO09053 1401 aa17.37■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Znf692Q3U381 531 aa17.37■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Ncoa2Q61026 1462 aa17.36■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Sox12Q04890 314 aa17.35■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Fam43aQ8BUP8 424 aa17.35■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Casc1Q6TDU8 730 aa17.35■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Rrp9Q91WM3 475 aaKnown RBP17.35■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Usp47Q8BY87 1376 aa17.34■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Sh3bp5Q9Z131 463 aa17.34■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Chmp5Q9D7S9 219 aa17.34■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Spag9Q58A65 1321 aaKnown RBP17.33■□□□□ 0.37
Col18a1-201ENSMUST00000072755 ChgaP26339 463 aaKnown RBP17.33■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Q3TQI7 289 aaKnown RBP17.33■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Slc4a1apE9PX68 744 aa17.33■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Fan1Q69ZT1 1020 aa17.33■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Clstn1Q9EPL2 979 aa17.33■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Tmco5bQ80X59 307 aa17.32■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Vgll3P85442 326 aa17.32■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms