RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 Cecr2E9Q2Z1 1453 aa17.72■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Rundc1Q0VDN7 615 aa17.72■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Synj1Q8CHC4 1574 aa17.72■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Atad2bE9Q166 1460 aaKnown RBP17.71■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Spryd3E9Q9B3 442 aa17.71■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Gm6268A2A3U9 297 aa17.7■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Arid3cA6PWV5 409 aa17.7■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Carmil1Q6EDY6 1374 aa17.69■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Lemd3Q9WU40 921 aa17.69■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Cabp1Q9JLK7 227 aa17.68■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Smarca4Q3TKT4 1613 aaKnown RBP17.68■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Mphosph9A6H5Y1 991 aa17.68■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Nolc1E9Q5C9 702 aaKnown RBP17.67■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Ifit1bl1D3Z6F0 470 aa17.67■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Trak1Q6PD31 939 aa17.66■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Gtf2e1Q9D0D5 440 aa17.66■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Map7O88735 730 aa17.65■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Ipo4Q8VI75 1082 aa17.64■□□□□ 0.42
Col18a1-201ENSMUST00000072755 Mbd3Q9Z2D8 285 aaKnown RBP17.63■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Plekhh2Q8C115 1491 aa17.63■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Tmf1B9EKI3 1091 aa17.63■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Wwc2Q6NXJ0 1187 aa17.62■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Ipo9Q91YE6 1041 aa17.61■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Rapgef2Q8CHG7 1496 aa17.61■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Cttnbp2B9EJA2 1648 aa17.6■□□□□ 0.41
Col18a1-201ENSMUST00000072755 1700019A02RikA0A087WPV9 146 aa17.6■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Nup155Q99P88 1391 aaKnown RBP17.6■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Arid4bA2CG63 1314 aaKnown RBP17.59■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Htatsf1Q8BGC0 757 aa17.59■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Ppm1gQ61074 542 aa17.59■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Rwdd1Q9CQK7 243 aa17.58■□□□□ 0.41
Col18a1-201ENSMUST00000072755 Slc4a3P16283 1227 aa17.58■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Stk26Q99JT2 416 aa17.57■□□□□ 0.4
Col18a1-201ENSMUST00000072755 4933402E13RikQ9D4D2 429 aa17.57■□□□□ 0.4
Col18a1-201ENSMUST00000072755 ScribQ80U72 1612 aa17.56■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Q8BT18 775 aa17.56■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Pdcl3Q8BVF2 240 aa17.56■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Rrp12Q6P5B0 1295 aaKnown RBP17.55■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Armcx1Q9CX83 456 aa17.55■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Dbr1Q923B1 550 aa17.54■□□□□ 0.4
Col18a1-201ENSMUST00000072755 PtmaP26350 111 aa17.54■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Rock2P70336 1388 aa17.54■□□□□ 0.4
Col18a1-201ENSMUST00000072755 LrpprcQ6PB66 1392 aaKnown RBP17.54■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Plcb2A3KGF7 1181 aa17.53■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Exoc6Q8R313 802 aa17.53■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Sin3aQ60520 1274 aaKnown RBP17.52■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Ccnb3Q810T2 1396 aa17.52■□□□□ 0.4
Col18a1-201ENSMUST00000072755 Rtf1A2AQ19 715 aaKnown RBP17.52■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Psme1P97371 249 aa17.52■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Kif3bQ61771 747 aa17.51■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Speer4f1Q9D5Q6 258 aa17.51■□□□□ 0.39
Col18a1-201ENSMUST00000072755 KnstrnQ9D9Z1 312 aaKnown RBP17.5■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Rsph4aQ8BYM7 716 aa17.5■□□□□ 0.39
Col18a1-201ENSMUST00000072755 UacaQ8CGB3 1411 aa17.5■□□□□ 0.39
Col18a1-201ENSMUST00000072755 HnrnpuQ8VEK3 800 aaKnown RBP17.5■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Zscan21Q07231 555 aa17.49■□□□□ 0.39
Col18a1-201ENSMUST00000072755 B4galnt3Q6L8S8 986 aa17.48■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Hsp90b1P08113 802 aaKnown RBP17.47■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Fbxo2Q80UW2 297 aa17.47■□□□□ 0.39
Col18a1-201ENSMUST00000072755 TimelessQ9R1X4 1197 aa17.46■□□□□ 0.39
Col18a1-201ENSMUST00000072755 Txndc2Q6P902 515 aa17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Dcaf11Q91VU6 549 aa17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Mak16Q8BGS0 296 aaKnown RBP17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 U2af1Q9D883 239 aaKnown RBP17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Pes1Q9EQ61 584 aaKnown RBP17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Srcin1Q9QWI6 1250 aa17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Dhx29Q6PGC1 1365 aaKnown RBP17.45■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Sart1Q9Z315 806 aaKnown RBP17.44■□□□□ 0.38
Col18a1-201ENSMUST00000072755 U2surpQ6NV83 1029 aaKnown RBP17.44■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Stard8Q8K031 1019 aa17.43■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Golga2Q921M4 999 aa17.43■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Iqgap2Q3UQ44 1575 aa17.43■□□□□ 0.38
Col18a1-201ENSMUST00000072755 MccE9PWI3 1003 aa17.42■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Birc3O08863 600 aa17.4■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Erich6bQ9D4S6 220 aa17.4■□□□□ 0.38
Col18a1-201ENSMUST00000072755 MsnP26041 577 aaKnown RBP17.4■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Eif4g2Q62448 906 aaKnown RBP17.39■□□□□ 0.38
Col18a1-201ENSMUST00000072755 Sart3Q9JLI8 962 aaKnown RBP17.39■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Tcerg1Q8CGF7 1100 aaKnown RBP17.38■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Plin1Q8CGN5 517 aa17.38■□□□□ 0.37
Col18a1-201ENSMUST00000072755 CenpjQ569L8 1344 aa17.38■□□□□ 0.37
Col18a1-201ENSMUST00000072755 PnnO35691 725 aaKnown RBP17.37■□□□□ 0.37
Col18a1-201ENSMUST00000072755 WrnO09053 1401 aa17.37■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Znf692Q3U381 531 aa17.37■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Ncoa2Q61026 1462 aa17.36■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Sox12Q04890 314 aa17.35■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Fam43aQ8BUP8 424 aa17.35■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Casc1Q6TDU8 730 aa17.35■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Rrp9Q91WM3 475 aaKnown RBP17.35■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Usp47Q8BY87 1376 aa17.34■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Sh3bp5Q9Z131 463 aa17.34■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Chmp5Q9D7S9 219 aa17.34■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Spag9Q58A65 1321 aaKnown RBP17.33■□□□□ 0.37
Col18a1-201ENSMUST00000072755 ChgaP26339 463 aaKnown RBP17.33■□□□□ 0.37
Col18a1-201ENSMUST00000072755 Q3TQI7 289 aaKnown RBP17.33■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Slc4a1apE9PX68 744 aa17.33■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Fan1Q69ZT1 1020 aa17.33■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Clstn1Q9EPL2 979 aa17.33■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Tmco5bQ80X59 307 aa17.32■□□□□ 0.36
Col18a1-201ENSMUST00000072755 Vgll3P85442 326 aa17.32■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 53.1 ms