RNA–Protein interactions for RNA: ENSMUST00000072008.10

Sh3rf2-201, Transcript of Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf2, Length 5,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2-201ENSMUST00000072008 Soga1E1U8D0 1418 aa13.22□□□□□ -0.29
Sh3rf2-201ENSMUST00000072008 NrkQ9R0G8 1455 aa13.22□□□□□ -0.29
Sh3rf2-201ENSMUST00000072008 Jph4Q80WT0 628 aa13.22□□□□□ -0.29
Sh3rf2-201ENSMUST00000072008 Top2aQ01320 1528 aaKnown RBP13.22□□□□□ -0.29
Sh3rf2-201ENSMUST00000072008 NgefQ8CHT1 710 aa13.21□□□□□ -0.29
Sh3rf2-201ENSMUST00000072008 Hsp90aa1P07901 733 aaKnown RBP13.21□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Map7O88735 730 aa13.2□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Psme1P97371 249 aa13.2□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Neurod2Q62414 383 aa13.19□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Trim30dE9PWL0 497 aa13.19□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Hsp90ab1P11499 724 aaKnown RBP13.19□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Srcin1Q9QWI6 1250 aa13.19□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Cnga1P29974 684 aa13.17□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Ccdc9Q8VC31 543 aaKnown RBP13.17□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Cc2d2bA0A286YDU8 1405 aa13.17□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Zscan21Q07231 555 aa13.16□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Rwdd1Q9CQK7 243 aa13.16□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Gm38655A0A286YDK6 273 aa13.16□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Txndc2Q6P902 515 aa13.16□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Map3k1P53349 1493 aa13.16□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 CenpjQ569L8 1344 aa13.15□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Spag9Q58A65 1321 aaKnown RBP13.15□□□□□ -0.3
Sh3rf2-201ENSMUST00000072008 Gm6268A2A3U9 297 aa13.14□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 HdgfP51859 237 aaKnown RBP13.14□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 HnrnpuQ8VEK3 800 aaKnown RBP13.14□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Irx6Q9ER75 438 aa13.14□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Stk26Q99JT2 416 aa13.14□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Duox2A2AQ99 1517 aa13.14□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Rtf1A2AQ19 715 aaKnown RBP13.14□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Mrc2Q64449 1479 aa13.14□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 CanxP35564 591 aaKnown RBP13.13□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Wwc2Q6NXJ0 1187 aa13.13□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Urb2E9Q7L1 1524 aaKnown RBP13.13□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Eif4g2Q62448 906 aaKnown RBP13.12□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Mak16Q8BGS0 296 aaKnown RBP13.12□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Cc2d2aQ8CFW7 1633 aa13.12□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Ppm1gQ61074 542 aa13.12□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Nsd2Q8BVE8 1365 aa13.11□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Ankrd36D3Z4K0 1415 aa13.11□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 PogzQ8BZH4 1409 aaKnown RBP13.11□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Prdm16A2A935 1275 aa13.11□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Usp47Q8BY87 1376 aa13.1□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Apbb1Q9QXJ1 710 aa13.1□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Htatsf1Q8BGC0 757 aa13.09□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 KnstrnQ9D9Z1 312 aaKnown RBP13.09□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Grin2bQ01097 1482 aa13.09□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Frmpd1A2AKB4 1549 aa13.09□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Exoc6Q8R313 802 aa13.09□□□□□ -0.31
Sh3rf2-201ENSMUST00000072008 Dcaf11Q91VU6 549 aa13.08□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Pde3bQ61409 1100 aa13.07□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Tdrd9Q14BI7 1383 aa13.07□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Golga2Q921M4 999 aa13.07□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Speer4f1Q9D5Q6 258 aa13.07□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 U2af1Q9D883 239 aaKnown RBP13.07□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Fgd6Q69ZL1 1399 aa13.07□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 DekQ7TNV0 380 aaKnown RBP13.07□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Znf326O88291 580 aa13.06□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Sin3aQ60520 1274 aaKnown RBP13.06□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Ift140E9PY46 1464 aa13.06□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 1700123L14RikQ3V2K7 440 aa13.05□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Sart3Q9JLI8 962 aaKnown RBP13.05□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Rad54l2Q99NG0 1466 aa13.05□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 1700019A02RikA0A087WPV9 146 aa13.05□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Vps8Q0P5W1 1427 aa13.04□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Utp14aQ640M1 767 aaKnown RBP13.03□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Fan1Q69ZT1 1020 aa13.03□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 ErbinQ80TH2 1402 aa13.02□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 MlecQ6ZQI3 291 aaKnown RBP13.02□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Gm7298A0A0N4SVU1 1476 aa13.02□□□□□ -0.32
Sh3rf2-201ENSMUST00000072008 Mroh2bQ7M6Y6 1581 aa13.02□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Birc3O08863 600 aa13.01□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 MccE9PWI3 1003 aa13.01□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Slc4a1apE9PX68 744 aa13.01□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Ap3b2Q9JME5 1082 aa13□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Wdr62Q3U3T8 1523 aa13□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Naip1Q9QWK5 1403 aa12.99□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Tcerg1Q8CGF7 1100 aaKnown RBP12.99□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 CadpsQ80TJ1 1355 aa12.99□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Arhgap31A6X8Z5 1425 aa12.98□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Rab11fip3Q8CHD8 1047 aa12.98□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 BicraF8VPZ9 1578 aa12.98□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Arhgef5E9Q7D5 1581 aa12.98□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Hsp90b1P08113 802 aaKnown RBP12.97□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Fam163aQ8CAA5 168 aa12.97□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Ccar1Q8CH18 1146 aaKnown RBP12.97□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 U2surpQ6NV83 1029 aaKnown RBP12.97□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Q3TQI7 289 aaKnown RBP12.97□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Trim44Q9QXA7 346 aa12.96□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Usp40Q8BWR4 1235 aa12.96□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 PtmsQ9D0J8 101 aaKnown RBP12.96□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Pes1Q9EQ61 584 aaKnown RBP12.96□□□□□ -0.33
Sh3rf2-201ENSMUST00000072008 Dapk1Q80YE7 1442 aa12.95□□□□□ -0.34
Sh3rf2-201ENSMUST00000072008 Ccdc141E9Q8Q6 1531 aa12.95□□□□□ -0.34
Sh3rf2-201ENSMUST00000072008 AqrQ8CFQ3 1481 aaKnown RBP12.95□□□□□ -0.34
Sh3rf2-201ENSMUST00000072008 Arhgap5P97393 1501 aa12.95□□□□□ -0.34
Sh3rf2-201ENSMUST00000072008 Gm14025A2AP89 1413 aa12.95□□□□□ -0.34
Sh3rf2-201ENSMUST00000072008 Fam184bQ0KK56 942 aa12.94□□□□□ -0.34
Sh3rf2-201ENSMUST00000072008 Top2bQ64511 1612 aa12.94□□□□□ -0.34
Sh3rf2-201ENSMUST00000072008 Smg6P61406 1418 aaKnown RBP12.94□□□□□ -0.34
Sh3rf2-201ENSMUST00000072008 Shq1Q7TMX5 569 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms