RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 Dhx29Q6PGC1 1365 aaKnown RBP22.9■■□□□ 1.26
Sdc3-201ENSMUST00000070478 Exoc6Q8R313 802 aa22.9■■□□□ 1.26
Sdc3-201ENSMUST00000070478 Rtn4Q99P72 1162 aaKnown RBP22.9■■□□□ 1.26
Sdc3-201ENSMUST00000070478 Plekhh2Q8C115 1491 aa22.89■■□□□ 1.25
Sdc3-201ENSMUST00000070478 Ccnb3Q810T2 1396 aa22.89■■□□□ 1.25
Sdc3-201ENSMUST00000070478 Dbr1Q923B1 550 aa22.88■■□□□ 1.25
Sdc3-201ENSMUST00000070478 Armcx1Q9CX83 456 aa22.87■■□□□ 1.25
Sdc3-201ENSMUST00000070478 Rwdd1Q9CQK7 243 aa22.87■■□□□ 1.25
Sdc3-201ENSMUST00000070478 Psme1P97371 249 aa22.85■■□□□ 1.25
Sdc3-201ENSMUST00000070478 Txndc2Q6P902 515 aa22.84■■□□□ 1.25
Sdc3-201ENSMUST00000070478 Speer4f1Q9D5Q6 258 aa22.84■■□□□ 1.25
Sdc3-201ENSMUST00000070478 Zscan21Q07231 555 aa22.83■■□□□ 1.25
Sdc3-201ENSMUST00000070478 Srcin1Q9QWI6 1250 aa22.83■■□□□ 1.25
Sdc3-201ENSMUST00000070478 Fam71e1A1L3C1 212 aa22.82■■□□□ 1.24
Sdc3-201ENSMUST00000070478 Dcaf11Q91VU6 549 aa22.82■■□□□ 1.24
Sdc3-201ENSMUST00000070478 Map7O88735 730 aa22.81■■□□□ 1.24
Sdc3-201ENSMUST00000070478 Plin1Q8CGN5 517 aa22.8■■□□□ 1.24
Sdc3-201ENSMUST00000070478 U2af1Q9D883 239 aaKnown RBP22.8■■□□□ 1.24
Sdc3-201ENSMUST00000070478 Rock2P70336 1388 aa22.8■■□□□ 1.24
Sdc3-201ENSMUST00000070478 B4galnt3Q6L8S8 986 aa22.79■■□□□ 1.24
Sdc3-201ENSMUST00000070478 Cttnbp2B9EJA2 1648 aa22.79■■□□□ 1.24
Sdc3-201ENSMUST00000070478 Rtf1A2AQ19 715 aaKnown RBP22.78■■□□□ 1.24
Sdc3-201ENSMUST00000070478 Birc3O08863 600 aa22.77■■□□□ 1.24
Sdc3-201ENSMUST00000070478 Ppm1gQ61074 542 aa22.77■■□□□ 1.24
Sdc3-201ENSMUST00000070478 Mbd3Q9Z2D8 285 aaKnown RBP22.76■■□□□ 1.23
Sdc3-201ENSMUST00000070478 WrnO09053 1401 aa22.76■■□□□ 1.23
Sdc3-201ENSMUST00000070478 U2surpQ6NV83 1029 aaKnown RBP22.76■■□□□ 1.23
Sdc3-201ENSMUST00000070478 Ecm2Q5FW85 670 aa22.75■■□□□ 1.23
Sdc3-201ENSMUST00000070478 Mak16Q8BGS0 296 aaKnown RBP22.75■■□□□ 1.23
Sdc3-201ENSMUST00000070478 Rsph4aQ8BYM7 716 aa22.74■■□□□ 1.23
Sdc3-201ENSMUST00000070478 UacaQ8CGB3 1411 aa22.73■■□□□ 1.23
Sdc3-201ENSMUST00000070478 Znf316Q6PGE4 1016 aa22.73■■□□□ 1.23
Sdc3-201ENSMUST00000070478 SafbD3YXK2 937 aaKnown RBP22.72■■□□□ 1.23
Sdc3-201ENSMUST00000070478 Znf326O88291 580 aa22.72■■□□□ 1.23
Sdc3-201ENSMUST00000070478 MlecQ6ZQI3 291 aaKnown RBP22.72■■□□□ 1.23
Sdc3-201ENSMUST00000070478 Plcb2A3KGF7 1181 aa22.72■■□□□ 1.23
Sdc3-201ENSMUST00000070478 Sox12Q04890 314 aa22.72■■□□□ 1.23
Sdc3-201ENSMUST00000070478 Htatsf1Q8BGC0 757 aa22.71■■□□□ 1.23
Sdc3-201ENSMUST00000070478 Trim44Q9QXA7 346 aa22.71■■□□□ 1.23
Sdc3-201ENSMUST00000070478 Fan1Q69ZT1 1020 aa22.71■■□□□ 1.23
Sdc3-201ENSMUST00000070478 Golga2Q921M4 999 aa22.71■■□□□ 1.23
Sdc3-201ENSMUST00000070478 Ythdc1E9Q5K9 736 aaKnown RBP22.7■■□□□ 1.22
Sdc3-201ENSMUST00000070478 Slc4a3P16283 1227 aa22.7■■□□□ 1.22
Sdc3-201ENSMUST00000070478 Hsp90b1P08113 802 aaKnown RBP22.69■■□□□ 1.22
Sdc3-201ENSMUST00000070478 Iqgap2Q3UQ44 1575 aa22.68■■□□□ 1.22
Sdc3-201ENSMUST00000070478 Slc4a1apE9PX68 744 aa22.68■■□□□ 1.22
Sdc3-201ENSMUST00000070478 Ccdc9Q8VC31 543 aaKnown RBP22.67■■□□□ 1.22
Sdc3-201ENSMUST00000070478 KnstrnQ9D9Z1 312 aaKnown RBP22.66■■□□□ 1.22
Sdc3-201ENSMUST00000070478 HnrnpuQ8VEK3 800 aaKnown RBP22.66■■□□□ 1.22
Sdc3-201ENSMUST00000070478 Tmco5bQ80X59 307 aa22.65■■□□□ 1.22
Sdc3-201ENSMUST00000070478 Stard8Q8K031 1019 aa22.65■■□□□ 1.22
Sdc3-201ENSMUST00000070478 Jph4Q80WT0 628 aa22.65■■□□□ 1.22
Sdc3-201ENSMUST00000070478 PtmaP26350 111 aa22.64■■□□□ 1.21
Sdc3-201ENSMUST00000070478 Utp14aQ640M1 767 aaKnown RBP22.64■■□□□ 1.21
Sdc3-201ENSMUST00000070478 Pes1Q9EQ61 584 aaKnown RBP22.64■■□□□ 1.21
Sdc3-201ENSMUST00000070478 Pabpn1Q8CCS6 302 aaKnown RBP22.63■■□□□ 1.21
Sdc3-201ENSMUST00000070478 Chmp5Q9D7S9 219 aa22.63■■□□□ 1.21
Sdc3-201ENSMUST00000070478 Usp47Q8BY87 1376 aa22.62■■□□□ 1.21
Sdc3-201ENSMUST00000070478 Ggt6Q6PDE7 497 aa22.61■■□□□ 1.21
Sdc3-201ENSMUST00000070478 Spag9Q58A65 1321 aaKnown RBP22.6■■□□□ 1.21
Sdc3-201ENSMUST00000070478 Soga1E1U8D0 1418 aa22.6■■□□□ 1.21
Sdc3-201ENSMUST00000070478 Tcerg1Q8CGF7 1100 aaKnown RBP22.59■■□□□ 1.21
Sdc3-201ENSMUST00000070478 Q3TQI7 289 aaKnown RBP22.59■■□□□ 1.21
Sdc3-201ENSMUST00000070478 Supt16hQ920B9 1047 aa22.58■■□□□ 1.21
Sdc3-201ENSMUST00000070478 CenpjQ569L8 1344 aa22.58■■□□□ 1.21
Sdc3-201ENSMUST00000070478 Tdrd9Q14BI7 1383 aa22.57■■□□□ 1.2
Sdc3-201ENSMUST00000070478 HdgfP51859 237 aaKnown RBP22.56■■□□□ 1.2
Sdc3-201ENSMUST00000070478 Sart3Q9JLI8 962 aaKnown RBP22.56■■□□□ 1.2
Sdc3-201ENSMUST00000070478 CatipB9EKE5 520 aa22.56■■□□□ 1.2
Sdc3-201ENSMUST00000070478 Cc2d2bA0A286YDU8 1405 aa22.56■■□□□ 1.2
Sdc3-201ENSMUST00000070478 CrbnQ8C7D2 445 aa22.55■■□□□ 1.2
Sdc3-201ENSMUST00000070478 Tnnt1O88346 262 aa22.54■■□□□ 1.2
Sdc3-201ENSMUST00000070478 Ccdc27Q3V036 639 aa22.53■■□□□ 1.2
Sdc3-201ENSMUST00000070478 Clstn1Q9EPL2 979 aa22.53■■□□□ 1.2
Sdc3-201ENSMUST00000070478 Efcab5A0JP43 1406 aa22.53■■□□□ 1.2
Sdc3-201ENSMUST00000070478 Pank3Q8R2W9 370 aa22.52■■□□□ 1.2
Sdc3-201ENSMUST00000070478 Znf330Q922H9 316 aa22.51■■□□□ 1.19
Sdc3-201ENSMUST00000070478 MccE9PWI3 1003 aa22.5■■□□□ 1.19
Sdc3-201ENSMUST00000070478 Eif4g2Q62448 906 aaKnown RBP22.5■■□□□ 1.19
Sdc3-201ENSMUST00000070478 Ksr2Q3UVC0 959 aa22.49■■□□□ 1.19
Sdc3-201ENSMUST00000070478 Cluap1Q8R3P7 413 aa22.49■■□□□ 1.19
Sdc3-201ENSMUST00000070478 Senp3Q9EP97 568 aaKnown RBP22.48■■□□□ 1.19
Sdc3-201ENSMUST00000070478 Sh3bp5Q9Z131 463 aa22.48■■□□□ 1.19
Sdc3-201ENSMUST00000070478 Ncoa2Q61026 1462 aa22.48■■□□□ 1.19
Sdc3-201ENSMUST00000070478 Usp40Q8BWR4 1235 aa22.46■■□□□ 1.19
Sdc3-201ENSMUST00000070478 EspnQ9ET47 871 aa22.46■■□□□ 1.19
Sdc3-201ENSMUST00000070478 Ap3b2Q9JME5 1082 aa22.46■■□□□ 1.19
Sdc3-201ENSMUST00000070478 PnnO35691 725 aaKnown RBP22.46■■□□□ 1.19
Sdc3-201ENSMUST00000070478 Shq1Q7TMX5 569 aa22.46■■□□□ 1.19
Sdc3-201ENSMUST00000070478 Shroom4Q1W617 1475 aa22.45■■□□□ 1.18
Sdc3-201ENSMUST00000070478 Casc1Q6TDU8 730 aa22.44■■□□□ 1.18
Sdc3-201ENSMUST00000070478 Lmod3E9QA62 571 aa22.43■■□□□ 1.18
Sdc3-201ENSMUST00000070478 Tsen2Q6P7W5 460 aa22.43■■□□□ 1.18
Sdc3-201ENSMUST00000070478 Inpp5dQ9ES52 1191 aa22.43■■□□□ 1.18
Sdc3-201ENSMUST00000070478 Pibf1E9Q6K3 756 aa22.43■■□□□ 1.18
Sdc3-201ENSMUST00000070478 Ccar1Q8CH18 1146 aaKnown RBP22.43■■□□□ 1.18
Sdc3-201ENSMUST00000070478 Rassf8Q8CJ96 419 aa22.42■■□□□ 1.18
Sdc3-201ENSMUST00000070478 Rad54l2Q99NG0 1466 aa22.41■■□□□ 1.18
Sdc3-201ENSMUST00000070478 Nol10Q5RJG1 687 aaKnown RBP22.4■■□□□ 1.18
Sdc3-201ENSMUST00000070478 Spryd3E9Q9B3 442 aa22.39■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms