RNA–Protein interactions for RNA: ENSMUST00000062317.4

Shroom2-201, Transcript of Protein Shroom2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shroom2, Length 6,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2-201ENSMUST00000062317 Rpap1Q80TE0 1409 aa13.32□□□□□ -0.28
Shroom2-201ENSMUST00000062317 Dnttip2Q8R2M2 758 aaKnown RBP13.31□□□□□ -0.28
Shroom2-201ENSMUST00000062317 U2surpQ6NV83 1029 aaKnown RBP13.31□□□□□ -0.28
Shroom2-201ENSMUST00000062317 Fmn1Q05860 1466 aa13.31□□□□□ -0.28
Shroom2-201ENSMUST00000062317 Clstn1Q9EPL2 979 aa13.29□□□□□ -0.28
Shroom2-201ENSMUST00000062317 Tmco5bQ80X59 307 aa13.29□□□□□ -0.28
Shroom2-201ENSMUST00000062317 Dcaf11Q91VU6 549 aa13.28□□□□□ -0.28
Shroom2-201ENSMUST00000062317 Dnai1Q8C0M8 701 aa13.28□□□□□ -0.28
Shroom2-201ENSMUST00000062317 Ipo9Q91YE6 1041 aa13.28□□□□□ -0.28
Shroom2-201ENSMUST00000062317 Arid3cA6PWV5 409 aa13.28□□□□□ -0.28
Shroom2-201ENSMUST00000062317 Zscan21Q07231 555 aa13.28□□□□□ -0.28
Shroom2-201ENSMUST00000062317 Arhgap35Q91YM2 1499 aa13.27□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Hsp90b1P08113 802 aaKnown RBP13.26□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Mfap1aC0HKD8 439 aaKnown RBP13.26□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Mfap1bC0HKD9 439 aaKnown RBP13.26□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Znf316Q6PGE4 1016 aa13.26□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Erich6bQ9D4S6 220 aa13.25□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Mak16Q8BGS0 296 aaKnown RBP13.25□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Synj1Q8CHC4 1574 aa13.25□□□□□ -0.29
Shroom2-201ENSMUST00000062317 U2af1Q9D883 239 aaKnown RBP13.25□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Fyco1Q8VDC1 1437 aa13.24□□□□□ -0.29
Shroom2-201ENSMUST00000062317 EspnQ9ET47 871 aa13.24□□□□□ -0.29
Shroom2-201ENSMUST00000062317 GorabQ8BRM2 368 aa13.24□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Map7O88735 730 aa13.23□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Tnnt1O88346 262 aa13.22□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Tmf1B9EKI3 1091 aa13.22□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Taok2Q6ZQ29 1240 aa13.22□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Fhad1A6PWD2 1420 aa13.21□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Slc4a1apE9PX68 744 aa13.21□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Pibf1E9Q6K3 756 aa13.21□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Birc3O08863 600 aa13.21□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Gtf2e1Q9D0D5 440 aa13.21□□□□□ -0.29
Shroom2-201ENSMUST00000062317 Golga2Q921M4 999 aa13.21□□□□□ -0.3
Shroom2-201ENSMUST00000062317 MyclP10166 368 aa13.2□□□□□ -0.3
Shroom2-201ENSMUST00000062317 CftrP26361 1476 aa13.2□□□□□ -0.3
Shroom2-201ENSMUST00000062317 AknaQ80VW7 1404 aa13.19□□□□□ -0.3
Shroom2-201ENSMUST00000062317 Smg6P61406 1418 aaKnown RBP13.19□□□□□ -0.3
Shroom2-201ENSMUST00000062317 Pcmtd1P59913 357 aa13.19□□□□□ -0.3
Shroom2-201ENSMUST00000062317 Rock2P70336 1388 aa13.17□□□□□ -0.3
Shroom2-201ENSMUST00000062317 Ccnb3Q810T2 1396 aa13.17□□□□□ -0.3
Shroom2-201ENSMUST00000062317 Ksr2Q3UVC0 959 aa13.17□□□□□ -0.3
Shroom2-201ENSMUST00000062317 Casc1Q6TDU8 730 aa13.17□□□□□ -0.3
Shroom2-201ENSMUST00000062317 PrkcshO08795 521 aa13.16□□□□□ -0.3
Shroom2-201ENSMUST00000062317 Pank3Q8R2W9 370 aa13.16□□□□□ -0.3
Shroom2-201ENSMUST00000062317 Ipo8Q7TMY7 1010 aa13.16□□□□□ -0.3
Shroom2-201ENSMUST00000062317 Usp47Q8BY87 1376 aa13.16□□□□□ -0.3
Shroom2-201ENSMUST00000062317 NudcO35685 332 aaKnown RBP13.16□□□□□ -0.3
Shroom2-201ENSMUST00000062317 Sox12Q04890 314 aa13.15□□□□□ -0.3
Shroom2-201ENSMUST00000062317 Inpp5dQ9ES52 1191 aa13.15□□□□□ -0.3
Shroom2-201ENSMUST00000062317 KnstrnQ9D9Z1 312 aaKnown RBP13.14□□□□□ -0.31
Shroom2-201ENSMUST00000062317 CntlnA2AM05 1397 aa13.14□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Nup155Q99P88 1391 aaKnown RBP13.14□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Mbd3Q9Z2D8 285 aaKnown RBP13.14□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Fan1Q69ZT1 1020 aa13.14□□□□□ -0.31
Shroom2-201ENSMUST00000062317 SlkO54988 1233 aa13.13□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Pes1Q9EQ61 584 aaKnown RBP13.13□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Srcin1Q9QWI6 1250 aa13.12□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Sycp2Q9CUU3 1500 aa13.12□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Esx1O88933 382 aa13.12□□□□□ -0.31
Shroom2-201ENSMUST00000062317 AU015836B2RUM3 263 aa13.11□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Sh3bp5Q9Z131 463 aa13.11□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Kif3bQ61771 747 aa13.1□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Cux2P70298 1426 aa13.1□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Smarca2Q6DIC0 1577 aa13.1□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Pak3Q61036 559 aa13.09□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Zfp644E9QA22 1323 aa13.09□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Iqcf3Q9D498 203 aa13.09□□□□□ -0.31
Shroom2-201ENSMUST00000062317 Rassf8Q8CJ96 419 aa13.08□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Gtf3c3Q3TMP1 882 aa13.07□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Ccdc146E9Q9F7 977 aa13.07□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Kcnh8P59111 1102 aa13.07□□□□□ -0.32
Shroom2-201ENSMUST00000062317 CgnP59242 1191 aa13.07□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Plekhh2Q8C115 1491 aa13.07□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Sart3Q9JLI8 962 aaKnown RBP13.07□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Znf710Q3U288 666 aa13.06□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Eif2s2Q99L45 331 aaKnown RBP13.06□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Rtf1A2AQ19 715 aaKnown RBP13.06□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Chmp4cQ9D7F7 232 aa13.06□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Ppp1r18Q8BQ30 594 aa13.05□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Gpatch11Q3UFS4 262 aa13.04□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Ubap1lG3UW59 384 aa13.04□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Rpgrip1lQ8CG73 1264 aa13.04□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Cc2d1aQ8K1A6 943 aa13.04□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Q3TQI7 289 aaKnown RBP13.03□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Sart1Q9Z315 806 aaKnown RBP13.03□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Rfx1P48377 963 aa13.03□□□□□ -0.32
Shroom2-201ENSMUST00000062317 Pds5bQ4VA53 1446 aaKnown RBP13.02□□□□□ -0.32
Shroom2-201ENSMUST00000062317 MccE9PWI3 1003 aa13.02□□□□□ -0.33
Shroom2-201ENSMUST00000062317 Tsen2Q6P7W5 460 aa13.02□□□□□ -0.33
Shroom2-201ENSMUST00000062317 Chmp4bQ9D8B3 224 aaKnown RBP13.02□□□□□ -0.33
Shroom2-201ENSMUST00000062317 Znf326O88291 580 aa13.02□□□□□ -0.33
Shroom2-201ENSMUST00000062317 PnnO35691 725 aaKnown RBP13.01□□□□□ -0.33
Shroom2-201ENSMUST00000062317 Cc2d2aQ8CFW7 1633 aa13.01□□□□□ -0.33
Shroom2-201ENSMUST00000062317 CrebrfQ8CDG5 640 aaKnown RBP13.01□□□□□ -0.33
Shroom2-201ENSMUST00000062317 ScribQ80U72 1612 aa13□□□□□ -0.33
Shroom2-201ENSMUST00000062317 HnrnpuQ8VEK3 800 aaKnown RBP13□□□□□ -0.33
Shroom2-201ENSMUST00000062317 IbspQ61711 324 aa13□□□□□ -0.33
Shroom2-201ENSMUST00000062317 Mical1Q8VDP3 1048 aa13□□□□□ -0.33
Shroom2-201ENSMUST00000062317 Carmil1Q6EDY6 1374 aa13□□□□□ -0.33
Shroom2-201ENSMUST00000062317 Ak7Q9D2H2 614 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms