RNA–Protein interactions for RNA: ENSMUST00000056889.14

Chd4-201, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Chd4, Length 6,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-201ENSMUST00000056889 EspnQ9ET47 871 aa18.64■□□□□ 0.57
Chd4-201ENSMUST00000056889 Pknox2Q8BG99 474 aa18.64■□□□□ 0.57
Chd4-201ENSMUST00000056889 Chmp4bQ9D8B3 224 aaKnown RBP18.63■□□□□ 0.57
Chd4-201ENSMUST00000056889 BccipQ9CWI3 316 aa18.63■□□□□ 0.57
Chd4-201ENSMUST00000056889 U2surpQ6NV83 1029 aaKnown RBP18.63■□□□□ 0.57
Chd4-201ENSMUST00000056889 Stk24Q99KH8 431 aa18.63■□□□□ 0.57
Chd4-201ENSMUST00000056889 RdxP26043 583 aaKnown RBP18.62■□□□□ 0.57
Chd4-201ENSMUST00000056889 PrkcshO08795 521 aa18.62■□□□□ 0.57
Chd4-201ENSMUST00000056889 NudcO35685 332 aaKnown RBP18.61■□□□□ 0.57
Chd4-201ENSMUST00000056889 Trim30aP15533 496 aa18.61■□□□□ 0.57
Chd4-201ENSMUST00000056889 CrebrfQ8CDG5 640 aaKnown RBP18.61■□□□□ 0.57
Chd4-201ENSMUST00000056889 GorabQ8BRM2 368 aa18.61■□□□□ 0.57
Chd4-201ENSMUST00000056889 Znf330Q922H9 316 aa18.6■□□□□ 0.57
Chd4-201ENSMUST00000056889 Speer4f1Q9D5Q6 258 aa18.6■□□□□ 0.57
Chd4-201ENSMUST00000056889 Cwc22Q8C5N3 908 aaKnown RBP18.6■□□□□ 0.57
Chd4-201ENSMUST00000056889 Ipo8Q7TMY7 1010 aa18.59■□□□□ 0.57
Chd4-201ENSMUST00000056889 Cald1E9QA15 768 aaKnown RBP18.59■□□□□ 0.57
Chd4-201ENSMUST00000056889 Mbd3Q9Z2D8 285 aaKnown RBP18.59■□□□□ 0.57
Chd4-201ENSMUST00000056889 Ubl4bQ9CQ84 188 aa18.58■□□□□ 0.56
Chd4-201ENSMUST00000056889 Tomm22Q9CPQ3 142 aa18.57■□□□□ 0.56
Chd4-201ENSMUST00000056889 Iffo2Q8R2V2 512 aa18.57■□□□□ 0.56
Chd4-201ENSMUST00000056889 Nolc1E9Q5C9 702 aaKnown RBP18.57■□□□□ 0.56
Chd4-201ENSMUST00000056889 Arid4aF8VPQ2 1261 aaKnown RBP18.56■□□□□ 0.56
Chd4-201ENSMUST00000056889 Iqcf3Q9D498 203 aa18.54■□□□□ 0.56
Chd4-201ENSMUST00000056889 Fbxo2Q80UW2 297 aa18.54■□□□□ 0.56
Chd4-201ENSMUST00000056889 Tmco5bQ80X59 307 aa18.53■□□□□ 0.56
Chd4-201ENSMUST00000056889 VgfQ0VGU4 617 aa18.53■□□□□ 0.56
Chd4-201ENSMUST00000056889 Exoc6Q8R313 802 aa18.52■□□□□ 0.56
Chd4-201ENSMUST00000056889 Becn1O88597 448 aa18.52■□□□□ 0.56
Chd4-201ENSMUST00000056889 Prm3Q62100 101 aa18.51■□□□□ 0.55
Chd4-201ENSMUST00000056889 Hspa5P20029 655 aaKnown RBP18.51■□□□□ 0.55
Chd4-201ENSMUST00000056889 MyclP10166 368 aa18.51■□□□□ 0.55
Chd4-201ENSMUST00000056889 HnrnpuQ8VEK3 800 aaKnown RBP18.5■□□□□ 0.55
Chd4-201ENSMUST00000056889 Tnnt1O88346 262 aa18.5■□□□□ 0.55
Chd4-201ENSMUST00000056889 Map7d2A2AG50 781 aa18.49■□□□□ 0.55
Chd4-201ENSMUST00000056889 Ddrgk1Q80WW9 315 aa18.49■□□□□ 0.55
Chd4-201ENSMUST00000056889 PtmsQ9D0J8 101 aaKnown RBP18.48■□□□□ 0.55
Chd4-201ENSMUST00000056889 Ftsj3Q9DBE9 838 aaKnown RBP18.48■□□□□ 0.55
Chd4-201ENSMUST00000056889 Sin3aQ60520 1274 aaKnown RBP18.48■□□□□ 0.55
Chd4-201ENSMUST00000056889 Rrp7aQ9D1C9 280 aaKnown RBP18.48■□□□□ 0.55
Chd4-201ENSMUST00000056889 Isy1Q69ZQ2 285 aaKnown RBP18.46■□□□□ 0.54
Chd4-201ENSMUST00000056889 Drc7Q6V3W6 876 aa18.45■□□□□ 0.54
Chd4-201ENSMUST00000056889 Tpm3-rs7D3Z2H9 248 aa18.45■□□□□ 0.54
Chd4-201ENSMUST00000056889 MecomP14404 1042 aa18.45■□□□□ 0.54
Chd4-201ENSMUST00000056889 Noc3lQ8VI84 807 aaKnown RBP18.44■□□□□ 0.54
Chd4-201ENSMUST00000056889 Ipo4Q8VI75 1082 aa18.42■□□□□ 0.54
Chd4-201ENSMUST00000056889 Rtf1A2AQ19 715 aaKnown RBP18.41■□□□□ 0.54
Chd4-201ENSMUST00000056889 Rundc1Q0VDN7 615 aa18.4■□□□□ 0.54
Chd4-201ENSMUST00000056889 Fam193aQ8CGI1 1231 aaKnown RBP18.4■□□□□ 0.54
Chd4-201ENSMUST00000056889 CrbnQ8C7D2 445 aa18.39■□□□□ 0.54
Chd4-201ENSMUST00000056889 R3hcc1Q8BSI6 488 aa18.39■□□□□ 0.53
Chd4-201ENSMUST00000056889 Ush1cQ9ES64 910 aa18.38■□□□□ 0.53
Chd4-201ENSMUST00000056889 Brpf1B2RRD7 1212 aa18.38■□□□□ 0.53
Chd4-201ENSMUST00000056889 Tpm3P21107 285 aaKnown RBP18.38■□□□□ 0.53
Chd4-201ENSMUST00000056889 Plcd4Q8K3R3 807 aa18.38■□□□□ 0.53
Chd4-201ENSMUST00000056889 Sart3Q9JLI8 962 aaKnown RBP18.38■□□□□ 0.53
Chd4-201ENSMUST00000056889 Arhgap27A2AB59 869 aa18.37■□□□□ 0.53
Chd4-201ENSMUST00000056889 Sf3a1Q8K4Z5 791 aaKnown RBP18.34■□□□□ 0.53
Chd4-201ENSMUST00000056889 U2af1Q9D883 239 aaKnown RBP18.33■□□□□ 0.53
Chd4-201ENSMUST00000056889 Tpd52l1O54818 204 aa18.33■□□□□ 0.52
Chd4-201ENSMUST00000056889 Ccer1Q9CQL2 403 aa18.33■□□□□ 0.52
Chd4-201ENSMUST00000056889 Smarce1O54941 411 aaKnown RBP18.33■□□□□ 0.52
Chd4-201ENSMUST00000056889 Ncbp3Q8BZR9 615 aaKnown RBP18.32■□□□□ 0.52
Chd4-201ENSMUST00000056889 Q8BT18 775 aa18.32■□□□□ 0.52
Chd4-201ENSMUST00000056889 Stk26Q99JT2 416 aa18.32■□□□□ 0.52
Chd4-201ENSMUST00000056889 Polr3gQ6NXY9 223 aa18.31■□□□□ 0.52
Chd4-201ENSMUST00000056889 Pibf1E9Q6K3 756 aa18.31■□□□□ 0.52
Chd4-201ENSMUST00000056889 Q3TQI7 289 aaKnown RBP18.31■□□□□ 0.52
Chd4-201ENSMUST00000056889 Mtus2Q3UHD3 1353 aa18.31■□□□□ 0.52
Chd4-201ENSMUST00000056889 Golga2Q921M4 999 aa18.31■□□□□ 0.52
Chd4-201ENSMUST00000056889 Utp3Q9JI13 469 aaKnown RBP18.3■□□□□ 0.52
Chd4-201ENSMUST00000056889 Cspp1B2RX88 1205 aa18.3■□□□□ 0.52
Chd4-201ENSMUST00000056889 Ccdc146E9Q9F7 977 aa18.29■□□□□ 0.52
Chd4-201ENSMUST00000056889 Eea1Q8BL66 1411 aa18.29■□□□□ 0.52
Chd4-201ENSMUST00000056889 Fhad1A6PWD2 1420 aa18.28■□□□□ 0.52
Chd4-201ENSMUST00000056889 Zscan21Q07231 555 aa18.27■□□□□ 0.52
Chd4-201ENSMUST00000056889 Rfx1P48377 963 aa18.27■□□□□ 0.52
Chd4-201ENSMUST00000056889 Rsph3aQ3UFY4 516 aa18.27■□□□□ 0.52
Chd4-201ENSMUST00000056889 Ksr2Q3UVC0 959 aa18.27■□□□□ 0.51
Chd4-201ENSMUST00000056889 A0A0U1RNP2 1173 aa18.26■□□□□ 0.51
Chd4-201ENSMUST00000056889 Birc3O08863 600 aa18.26■□□□□ 0.51
Chd4-201ENSMUST00000056889 Rb1cc1Q9ESK9 1588 aa18.26■□□□□ 0.51
Chd4-201ENSMUST00000056889 Tmf1B9EKI3 1091 aa18.25■□□□□ 0.51
Chd4-201ENSMUST00000056889 Pnmal2G3X9N3 661 aa18.25■□□□□ 0.51
Chd4-201ENSMUST00000056889 Ifit1bl1D3Z6F0 470 aa18.25■□□□□ 0.51
Chd4-201ENSMUST00000056889 Nol10Q5RJG1 687 aaKnown RBP18.25■□□□□ 0.51
Chd4-201ENSMUST00000056889 Slc4a1apE9PX68 744 aa18.25■□□□□ 0.51
Chd4-201ENSMUST00000056889 Taf3Q5HZG4 932 aa18.25■□□□□ 0.51
Chd4-201ENSMUST00000056889 Vps53Q8CCB4 832 aa18.25■□□□□ 0.51
Chd4-201ENSMUST00000056889 Chmp4cQ9D7F7 232 aa18.25■□□□□ 0.51
Chd4-201ENSMUST00000056889 Dcaf11Q91VU6 549 aa18.24■□□□□ 0.51
Chd4-201ENSMUST00000056889 Rsph6aQ8CDR2 708 aa18.23■□□□□ 0.51
Chd4-201ENSMUST00000056889 Chmp3Q9CQ10 224 aa18.22■□□□□ 0.51
Chd4-201ENSMUST00000056889 4933402E13RikQ9D4D2 429 aa18.21■□□□□ 0.51
Chd4-201ENSMUST00000056889 Znf771Q8BJ90 317 aa18.21■□□□□ 0.51
Chd4-201ENSMUST00000056889 Gabpb2P81069 414 aa18.21■□□□□ 0.5
Chd4-201ENSMUST00000056889 Fam13bQ8K2H3 851 aa18.2■□□□□ 0.5
Chd4-201ENSMUST00000056889 Ylpm1Q9R0I7 1386 aaKnown RBP18.19■□□□□ 0.5
Chd4-201ENSMUST00000056889 Wdr78E9PYY5 807 aa18.19■□□□□ 0.5
Chd4-201ENSMUST00000056889 Pde3bQ61409 1100 aa18.18■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms