RNA–Protein interactions for RNA: ENSMUST00000056145.2

Gm5546-201, mousemouse

TSL 1 (best) BASIC

Gene Gm5546, Length 2,777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5546-201ENSMUST00000056145 CftrP26361 1476 aa10□□□□□ -0.81
Gm5546-201ENSMUST00000056145 Cux2P70298 1426 aa9.98□□□□□ -0.81
Gm5546-201ENSMUST00000056145 Rusc2Q80U22 1514 aa9.96□□□□□ -0.81
Gm5546-201ENSMUST00000056145 Lamc3Q9R0B6 1581 aa9.96□□□□□ -0.82
Gm5546-201ENSMUST00000056145 1700006A11RikB9EHI3 544 aa9.96□□□□□ -0.82
Gm5546-201ENSMUST00000056145 Chrm1P12657 460 aa9.95□□□□□ -0.82
Gm5546-201ENSMUST00000056145 Znf316Q6PGE4 1016 aa9.95□□□□□ -0.82
Gm5546-201ENSMUST00000056145 Nap1l5Q9JJF0 156 aa9.95□□□□□ -0.82
Gm5546-201ENSMUST00000056145 Pdap1Q3UHX2 181 aaKnown RBP9.93□□□□□ -0.82
Gm5546-201ENSMUST00000056145 Urb2E9Q7L1 1524 aaKnown RBP9.93□□□□□ -0.82
Gm5546-201ENSMUST00000056145 Plb1Q3TTY0 1478 aa9.93□□□□□ -0.82
Gm5546-201ENSMUST00000056145 PrimpolQ6P1E7 537 aa9.92□□□□□ -0.82
Gm5546-201ENSMUST00000056145 Plcd4Q8K3R3 807 aa9.92□□□□□ -0.82
Gm5546-201ENSMUST00000056145 Pcdhb17Q91VD8 799 aa9.92□□□□□ -0.82
Gm5546-201ENSMUST00000056145 Slain2Q8CI08 581 aa9.9□□□□□ -0.82
Gm5546-201ENSMUST00000056145 Synj1Q8CHC4 1574 aa9.9□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Rtl5Q5DTT4 599 aa9.9□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Cdk11bP24788 784 aaKnown RBP9.89□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Mllt3A2AM29 569 aa9.89□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Adgrl3Q80TS3 1537 aa9.88□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Neurod1Q60867 357 aa9.88□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Ciz1Q8VEH2 845 aa9.88□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Ube2q2Q8K2Z8 378 aa9.87□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Ift140E9PY46 1464 aa9.87□□□□□ -0.83
Gm5546-201ENSMUST00000056145 E2f4Q8R0K9 410 aa9.85□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Pbrm1Q8BSQ9 1634 aaKnown RBP9.85□□□□□ -0.83
Gm5546-201ENSMUST00000056145 CrebzfQ91ZR3 358 aa9.85□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Cep164Q5DU05 1446 aa9.84□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Pcdh10E9PXQ7 1057 aa9.84□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Ddx11Q6AXC6 880 aa9.84□□□□□ -0.83
Gm5546-201ENSMUST00000056145 Pde8bE9Q4S1 865 aa9.83□□□□□ -0.84
Gm5546-201ENSMUST00000056145 Znf330Q922H9 316 aa9.83□□□□□ -0.84
Gm5546-201ENSMUST00000056145 Crocc2F6XLV1 1638 aa9.82□□□□□ -0.84
Gm5546-201ENSMUST00000056145 Brd4Q9ESU6 1400 aaKnown RBP9.82□□□□□ -0.84
Gm5546-201ENSMUST00000056145 Kif15Q6P9L6 1387 aa9.82□□□□□ -0.84
Gm5546-201ENSMUST00000056145 PtprtQ99M80 1454 aa9.81□□□□□ -0.84
Gm5546-201ENSMUST00000056145 Cep170Q6A065 1588 aa9.79□□□□□ -0.84
Gm5546-201ENSMUST00000056145 4930567H17RikQ3V0K5 233 aa9.78□□□□□ -0.84
Gm5546-201ENSMUST00000056145 Neurod2Q62414 383 aa9.78□□□□□ -0.84
Gm5546-201ENSMUST00000056145 IncenpQ9WU62 880 aa9.78□□□□□ -0.84
Gm5546-201ENSMUST00000056145 E9Q0B3 247 aa9.77□□□□□ -0.84
Gm5546-201ENSMUST00000056145 Hnrnpul2Q00PI9 745 aaKnown RBP9.77□□□□□ -0.84
Gm5546-201ENSMUST00000056145 NclP09405 707 aaKnown RBP9.77□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Gm13695A2AK44 830 aa9.76□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Cadps2Q8BYR5 1297 aa9.76□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Anks4bQ8K3X6 423 aa9.76□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Speer2E9Q9U2 264 aa9.75□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Gpatch8A2A6A1 1505 aa9.75□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Pprc1Q6NZN1 1644 aa9.75□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Dhx29Q6PGC1 1365 aaKnown RBP9.74□□□□□ -0.85
Gm5546-201ENSMUST00000056145 TnnQ80Z71 1560 aa9.74□□□□□ -0.85
Gm5546-201ENSMUST00000056145 PtprkP35822 1457 aa9.74□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Zfp777B9EKF4 885 aa9.74□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Erich4Q3UNU4 136 aa9.74□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Rtl1Q7M732 1744 aa9.72□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Ndufv2Q9D6J6 248 aa9.72□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Nyap1Q6PFX7 833 aa9.72□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Znf326O88291 580 aa9.71□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Setd1bQ8CFT2 1985 aa9.71□□□□□ -0.85
Gm5546-201ENSMUST00000056145 Samd1D3YXK1 519 aa9.71□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Tor1aip2Q8BYU6 502 aa9.71□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Trim35Q8C006 501 aa9.71□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Mink1Q9JM52 1308 aa9.7□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Cypt1Q8CH20 168 aa9.7□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Fbxo3Q9DC63 480 aa9.69□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Irf6P97431 467 aa9.69□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Gapvd1Q6PAR5 1458 aa9.69□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Cc2d2bA0A286YDU8 1405 aa9.68□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Pitpnm1O35954 1243 aa9.68□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Nup160Q9Z0W3 1402 aaKnown RBP9.68□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Setbp1Q9Z180 1582 aa9.67□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Ccdc136Q3TVA9 1136 aa9.67□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Ccdc18Q640L5 1455 aa9.67□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Golga3P55937 1487 aa9.66□□□□□ -0.86
Gm5546-201ENSMUST00000056145 LrpprcQ6PB66 1392 aaKnown RBP9.66□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Gimap6Q8K349 305 aa9.65□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Rasgrp4Q8BTM9 673 aa9.65□□□□□ -0.86
Gm5546-201ENSMUST00000056145 Arhgef11Q68FM7 1552 aa9.65□□□□□ -0.86
Gm5546-201ENSMUST00000056145 NefmP08553 848 aa9.64□□□□□ -0.87
Gm5546-201ENSMUST00000056145 Camsap1A2AHC3 1581 aa9.64□□□□□ -0.87
Gm5546-201ENSMUST00000056145 Kcnv2Q8CFS6 562 aa9.63□□□□□ -0.87
Gm5546-201ENSMUST00000056145 Pcdhb20Q91XZ9 799 aa9.63□□□□□ -0.87
Gm5546-201ENSMUST00000056145 Bcl11bQ99PV8 884 aa9.63□□□□□ -0.87
Gm5546-201ENSMUST00000056145 Gm156Q58A37 223 aa9.63□□□□□ -0.87
Gm5546-201ENSMUST00000056145 PogzQ8BZH4 1409 aaKnown RBP9.62□□□□□ -0.87
Gm5546-201ENSMUST00000056145 Alpk3Q924C5 1678 aa9.62□□□□□ -0.87
Gm5546-201ENSMUST00000056145 Sptlc1O35704 473 aa9.62□□□□□ -0.87
Gm5546-201ENSMUST00000056145 Secisbp2lQ6A098 1086 aaKnown RBP9.62□□□□□ -0.87
Gm5546-201ENSMUST00000056145 Disp1Q3TDN0 1521 aa9.62□□□□□ -0.87
Gm5546-201ENSMUST00000056145 EprsQ8CGC7 1512 aaKnown RBP9.61□□□□□ -0.87
Gm5546-201ENSMUST00000056145 AdgbG3UZ78 1657 aa9.61□□□□□ -0.87
Gm5546-201ENSMUST00000056145 Chd1P40201 1711 aa9.59□□□□□ -0.87
Gm5546-201ENSMUST00000056145 AqrQ8CFQ3 1481 aaKnown RBP9.59□□□□□ -0.87
Gm5546-201ENSMUST00000056145 Fgd6Q69ZL1 1399 aa9.59□□□□□ -0.87
Gm5546-201ENSMUST00000056145 Csrnp3P59055 597 aa9.58□□□□□ -0.88
Gm5546-201ENSMUST00000056145 Rapgef2Q8CHG7 1496 aa9.58□□□□□ -0.88
Gm5546-201ENSMUST00000056145 Tpcn2Q8BWC0 731 aa9.58□□□□□ -0.88
Gm5546-201ENSMUST00000056145 Prr7Q3V0I2 269 aa9.56□□□□□ -0.88
Gm5546-201ENSMUST00000056145 Plcd3Q8K2J0 785 aa9.56□□□□□ -0.88
Gm5546-201ENSMUST00000056145 GopcQ8BH60 463 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms