RNA–Protein interactions for RNA: ENSMUST00000044565.14

Col16a1-201, Transcript of Collagen alpha-1(XVI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col16a1, Length 5,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1-201ENSMUST00000044565 Tmf1B9EKI3 1091 aa19.94■□□□□ 0.78
Col16a1-201ENSMUST00000044565 Txndc2Q6P902 515 aa19.92■□□□□ 0.78
Col16a1-201ENSMUST00000044565 Jph4Q80WT0 628 aa19.92■□□□□ 0.78
Col16a1-201ENSMUST00000044565 Shroom4Q1W617 1475 aa19.91■□□□□ 0.78
Col16a1-201ENSMUST00000044565 Neurod2Q62414 383 aa19.91■□□□□ 0.78
Col16a1-201ENSMUST00000044565 Frmpd1A2AKB4 1549 aa19.9■□□□□ 0.78
Col16a1-201ENSMUST00000044565 Stk26Q99JT2 416 aa19.9■□□□□ 0.78
Col16a1-201ENSMUST00000044565 Mrc2Q64449 1479 aa19.89■□□□□ 0.77
Col16a1-201ENSMUST00000044565 Hsp90aa1P07901 733 aaKnown RBP19.88■□□□□ 0.77
Col16a1-201ENSMUST00000044565 MlecQ6ZQI3 291 aaKnown RBP19.88■□□□□ 0.77
Col16a1-201ENSMUST00000044565 Rock2P70336 1388 aa19.87■□□□□ 0.77
Col16a1-201ENSMUST00000044565 Cux1P53564 1515 aa19.85■□□□□ 0.77
Col16a1-201ENSMUST00000044565 Gm6268A2A3U9 297 aa19.84■□□□□ 0.77
Col16a1-201ENSMUST00000044565 Urb2E9Q7L1 1524 aaKnown RBP19.84■□□□□ 0.77
Col16a1-201ENSMUST00000044565 HdgfP51859 237 aaKnown RBP19.83■□□□□ 0.77
Col16a1-201ENSMUST00000044565 Cc2d2bA0A286YDU8 1405 aa19.83■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Gm38655A0A286YDK6 273 aa19.82■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Srcin1Q9QWI6 1250 aa19.82■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Trim30dE9PWL0 497 aa19.81■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Top2aQ01320 1528 aaKnown RBP19.81■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Mbd3Q9Z2D8 285 aaKnown RBP19.81■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Hsp90ab1P11499 724 aaKnown RBP19.8■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Rtf1A2AQ19 715 aaKnown RBP19.8■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Spag9Q58A65 1321 aaKnown RBP19.79■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Cc2d2aQ8CFW7 1633 aa19.79■□□□□ 0.76
Col16a1-201ENSMUST00000044565 NrkQ9R0G8 1455 aa19.79■□□□□ 0.76
Col16a1-201ENSMUST00000044565 CenpjQ569L8 1344 aa19.78■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Apbb1Q9QXJ1 710 aa19.77■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Map7O88735 730 aa19.77■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Eif4g2Q62448 906 aaKnown RBP19.77■□□□□ 0.76
Col16a1-201ENSMUST00000044565 Duox2A2AQ99 1517 aa19.75■□□□□ 0.75
Col16a1-201ENSMUST00000044565 Wdr62Q3U3T8 1523 aa19.75■□□□□ 0.75
Col16a1-201ENSMUST00000044565 1700019A02RikA0A087WPV9 146 aa19.74■□□□□ 0.75
Col16a1-201ENSMUST00000044565 Wwc2Q6NXJ0 1187 aa19.73■□□□□ 0.75
Col16a1-201ENSMUST00000044565 Zscan21Q07231 555 aa19.72■□□□□ 0.75
Col16a1-201ENSMUST00000044565 Rwdd1Q9CQK7 243 aa19.72■□□□□ 0.75
Col16a1-201ENSMUST00000044565 Ggt6Q6PDE7 497 aa19.71■□□□□ 0.75
Col16a1-201ENSMUST00000044565 HnrnpuQ8VEK3 800 aaKnown RBP19.7■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Tdrd9Q14BI7 1383 aa19.7■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Rad54l2Q99NG0 1466 aa19.7■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Znf326O88291 580 aa19.7■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Dcaf11Q91VU6 549 aa19.7■□□□□ 0.74
Col16a1-201ENSMUST00000044565 PogzQ8BZH4 1409 aaKnown RBP19.69■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Fgd6Q69ZL1 1399 aa19.69■□□□□ 0.74
Col16a1-201ENSMUST00000044565 CanxP35564 591 aaKnown RBP19.68■□□□□ 0.74
Col16a1-201ENSMUST00000044565 U2af1Q9D883 239 aaKnown RBP19.68■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Nsd2Q8BVE8 1365 aa19.68■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Utp14aQ640M1 767 aaKnown RBP19.68■□□□□ 0.74
Col16a1-201ENSMUST00000044565 DekQ7TNV0 380 aaKnown RBP19.67■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Usp47Q8BY87 1376 aa19.67■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Birc3O08863 600 aa19.66■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Fan1Q69ZT1 1020 aa19.66■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Prdm16A2A935 1275 aa19.66■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Map3k1P53349 1493 aa19.66■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Speer4f1Q9D5Q6 258 aa19.65■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Grin2bQ01097 1482 aa19.65■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Mak16Q8BGS0 296 aaKnown RBP19.65■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Sin3aQ60520 1274 aaKnown RBP19.65■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Exoc6Q8R313 802 aa19.65■□□□□ 0.74
Col16a1-201ENSMUST00000044565 Sox12Q04890 314 aa19.64■□□□□ 0.73
Col16a1-201ENSMUST00000044565 Ap3b2Q9JME5 1082 aa19.64■□□□□ 0.73
Col16a1-201ENSMUST00000044565 Golga2Q921M4 999 aa19.63■□□□□ 0.73
Col16a1-201ENSMUST00000044565 Ift140E9PY46 1464 aa19.63■□□□□ 0.73
Col16a1-201ENSMUST00000044565 Rtn4Q99P72 1162 aaKnown RBP19.63■□□□□ 0.73
Col16a1-201ENSMUST00000044565 KnstrnQ9D9Z1 312 aaKnown RBP19.61■□□□□ 0.73
Col16a1-201ENSMUST00000044565 Sart3Q9JLI8 962 aaKnown RBP19.61■□□□□ 0.73
Col16a1-201ENSMUST00000044565 ErbinQ80TH2 1402 aa19.6■□□□□ 0.73
Col16a1-201ENSMUST00000044565 Ppm1gQ61074 542 aa19.59■□□□□ 0.73
Col16a1-201ENSMUST00000044565 U2surpQ6NV83 1029 aaKnown RBP19.59■□□□□ 0.73
Col16a1-201ENSMUST00000044565 Slc4a1apE9PX68 744 aa19.58■□□□□ 0.73
Col16a1-201ENSMUST00000044565 Gm7298A0A0N4SVU1 1476 aa19.58■□□□□ 0.72
Col16a1-201ENSMUST00000044565 Znf316Q6PGE4 1016 aa19.57■□□□□ 0.72
Col16a1-201ENSMUST00000044565 Pde3bQ61409 1100 aa19.57■□□□□ 0.72
Col16a1-201ENSMUST00000044565 Ankrd36D3Z4K0 1415 aa19.55■□□□□ 0.72
Col16a1-201ENSMUST00000044565 Q3TQI7 289 aaKnown RBP19.55■□□□□ 0.72
Col16a1-201ENSMUST00000044565 Arhgap31A6X8Z5 1425 aa19.55■□□□□ 0.72
Col16a1-201ENSMUST00000044565 CadpsQ80TJ1 1355 aa19.55■□□□□ 0.72
Col16a1-201ENSMUST00000044565 Shq1Q7TMX5 569 aa19.55■□□□□ 0.72
Col16a1-201ENSMUST00000044565 Hsp90b1P08113 802 aaKnown RBP19.54■□□□□ 0.72
Col16a1-201ENSMUST00000044565 Htatsf1Q8BGC0 757 aa19.53■□□□□ 0.72
Col16a1-201ENSMUST00000044565 Pes1Q9EQ61 584 aaKnown RBP19.53■□□□□ 0.72
Col16a1-201ENSMUST00000044565 Arhgap5P97393 1501 aa19.52■□□□□ 0.72
Col16a1-201ENSMUST00000044565 MccE9PWI3 1003 aa19.52■□□□□ 0.72
Col16a1-201ENSMUST00000044565 Usp40Q8BWR4 1235 aa19.51■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Gm14025A2AP89 1413 aa19.51■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Plin1Q8CGN5 517 aa19.5■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Vps8Q0P5W1 1427 aa19.5■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Mroh2bQ7M6Y6 1581 aa19.5■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Nol10Q5RJG1 687 aaKnown RBP19.49■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Ccdc141E9Q8Q6 1531 aa19.49■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Ccdc9Q8VC31 543 aaKnown RBP19.49■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Plb1Q3TTY0 1478 aa19.49■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Camsap1A2AHC3 1581 aa19.48■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Rab11fip3Q8CHD8 1047 aa19.48■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Lamc3Q9R0B6 1581 aa19.48■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Top2bQ64511 1612 aa19.47■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Armcx1Q9CX83 456 aa19.46■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Naip1Q9QWK5 1403 aa19.46■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Ccar1Q8CH18 1146 aaKnown RBP19.46■□□□□ 0.71
Col16a1-201ENSMUST00000044565 Pde4cQ3UEI1 686 aa19.45■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms