RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Fhod3Q76LL6 1578 aa33,42■■■□□ 2,94
Cln6-201ENSMUST00000034776 AknaQ80VW7 1404 aa33,39■■■□□ 2,94
Cln6-201ENSMUST00000034776 Kdm6bQ5NCY0 1641 aa33,39■■■□□ 2,94
Cln6-201ENSMUST00000034776 Plekhh2Q8C115 1491 aa33,37■■■□□ 2,93
Cln6-201ENSMUST00000034776 Cabp1Q9JLK7 227 aa33,37■■■□□ 2,93
Cln6-201ENSMUST00000034776 Prex2Q3LAC4 1598 aa33,35■■■□□ 2,93
Cln6-201ENSMUST00000034776 Cul7Q8VE73 1689 aa33,28■■■□□ 2,92
Cln6-201ENSMUST00000034776 Il16O54824 1322 aa33,27■■■□□ 2,92
Cln6-201ENSMUST00000034776 Mlh3A0A1Y7VMP7 1443 aa33,26■■■□□ 2,91
Cln6-201ENSMUST00000034776 Mtus2Q3UHD3 1353 aa33,25■■■□□ 2,91
Cln6-201ENSMUST00000034776 Gm14025A2AP89 1413 aa33,24■■■□□ 2,91
Cln6-201ENSMUST00000034776 Fancd2Q80V62 1450 aa33,23■■■□□ 2,91
Cln6-201ENSMUST00000034776 Hspa5P20029 655 aaKnown RBP33,22■■■□□ 2,91
Cln6-201ENSMUST00000034776 Ube2uB1AUC4 352 aa33,21■■■□□ 2,91
Cln6-201ENSMUST00000034776 NclP09405 707 aaKnown RBP33,21■■■□□ 2,91
Cln6-201ENSMUST00000034776 SphkapQ6NSW3 1687 aa33,2■■■□□ 2,91
Cln6-201ENSMUST00000034776 Kdm3bQ6ZPY7 1562 aa33,19■■■□□ 2,9
Cln6-201ENSMUST00000034776 Fkbp15Q6P9Q6 1216 aaKnown RBP33,19■■■□□ 2,9
Cln6-201ENSMUST00000034776 Caskin1Q6P9K8 1431 aa33,18■■■□□ 2,9
Cln6-201ENSMUST00000034776 Setbp1Q9Z180 1582 aa33,17■■■□□ 2,9
Cln6-201ENSMUST00000034776 Cdk11bP24788 784 aaKnown RBP33,17■■■□□ 2,9
Cln6-201ENSMUST00000034776 Fam208aQ69ZR9 1610 aaKnown RBP33,16■■■□□ 2,9
Cln6-201ENSMUST00000034776 Abcc1O35379 1528 aa33,15■■■□□ 2,9
Cln6-201ENSMUST00000034776 Mphosph9A6H5Y1 991 aa33,15■■■□□ 2,9
Cln6-201ENSMUST00000034776 Chd1P40201 1711 aa33,13■■■□□ 2,89
Cln6-201ENSMUST00000034776 Tdrd9Q14BI7 1383 aa33,1■■■□□ 2,89
Cln6-201ENSMUST00000034776 Adgrb2Q8CGM1 1561 aa33,08■■■□□ 2,89
Cln6-201ENSMUST00000034776 Zfp644E9QA22 1323 aa33,03■■■□□ 2,88
Cln6-201ENSMUST00000034776 Ppargc1bQ8VHJ7 1014 aa33,02■■■□□ 2,88
Cln6-201ENSMUST00000034776 Kiaa1210E9Q0C6 1637 aa33,01■■■□□ 2,87
Cln6-201ENSMUST00000034776 Naip5Q9R016 1403 aa33,01■■■□□ 2,87
Cln6-201ENSMUST00000034776 AlkP97793 1621 aa33■■■□□ 2,87
Cln6-201ENSMUST00000034776 NhsB1AV60 1647 aa33■■■□□ 2,87
Cln6-201ENSMUST00000034776 Lamc1P02468 1607 aaKnown RBP33■■■□□ 2,87
Cln6-201ENSMUST00000034776 Camsap2Q8C1B1 1461 aa32,99■■■□□ 2,87
Cln6-201ENSMUST00000034776 Wdr7Q920I9 1489 aa32,97■■■□□ 2,87
Cln6-201ENSMUST00000034776 Rnf17Q99MV7 1640 aa32,95■■■□□ 2,87
Cln6-201ENSMUST00000034776 Kif21bQ9QXL1 1668 aa32,91■■■□□ 2,86
Cln6-201ENSMUST00000034776 Pdcd11Q6NS46 1862 aaKnown RBP32,89■■■□□ 2,86
Cln6-201ENSMUST00000034776 Gm32742A0A1B0GT42 1604 aa32,88■■■□□ 2,85
Cln6-201ENSMUST00000034776 Fmn2Q9JL04 1578 aa32,87■■■□□ 2,85
Cln6-201ENSMUST00000034776 Pkd2O35245 966 aa32,87■■■□□ 2,85
Cln6-201ENSMUST00000034776 Arhgap5P97393 1501 aa32,85■■■□□ 2,85
Cln6-201ENSMUST00000034776 Rprd2Q6NXI6 1469 aaKnown RBP32,84■■■□□ 2,85
Cln6-201ENSMUST00000034776 Trpm2Q91YD4 1506 aa32,83■■■□□ 2,85
Cln6-201ENSMUST00000034776 Abca8bQ8K440 1620 aa32,81■■■□□ 2,84
Cln6-201ENSMUST00000034776 Gm13697A2AK42 830 aa32,8■■■□□ 2,84
Cln6-201ENSMUST00000034776 Adgrl2Q8JZZ7 1487 aa32,8■■■□□ 2,84
Cln6-201ENSMUST00000034776 Cfap74Q3UY96 1578 aa32,79■■■□□ 2,84
Cln6-201ENSMUST00000034776 Igf1rQ60751 1373 aa32,78■■■□□ 2,84
Cln6-201ENSMUST00000034776 Trappc8E9PWG2 1437 aa32,77■■■□□ 2,84
Cln6-201ENSMUST00000034776 Atp10dQ8K2X1 1416 aa32,77■■■□□ 2,84
Cln6-201ENSMUST00000034776 Usp47Q8BY87 1376 aa32,76■■■□□ 2,84
Cln6-201ENSMUST00000034776 Ythdc2B2RR83 1445 aaKnown RBP32,76■■■□□ 2,84
Cln6-201ENSMUST00000034776 Mast1Q9R1L5 1570 aa32,76■■■□□ 2,83
Cln6-201ENSMUST00000034776 Pik3c2gO70167 1506 aa32,75■■■□□ 2,83
Cln6-201ENSMUST00000034776 Neurl4Q5NCX5 1563 aa32,75■■■□□ 2,83
Cln6-201ENSMUST00000034776 Supt6hQ62383 1726 aaKnown RBP32,74■■■□□ 2,83
Cln6-201ENSMUST00000034776 Ttll5Q8CHB8 1328 aa32,74■■■□□ 2,83
Cln6-201ENSMUST00000034776 Nup155Q99P88 1391 aaKnown RBP32,7■■■□□ 2,83
Cln6-201ENSMUST00000034776 Abcc3B2RX12 1523 aa32,7■■■□□ 2,83
Cln6-201ENSMUST00000034776 Neurod1Q60867 357 aa32,66■■■□□ 2,82
Cln6-201ENSMUST00000034776 Sart1Q9Z315 806 aaKnown RBP32,66■■■□□ 2,82
Cln6-201ENSMUST00000034776 Lrrc9Q8CDN9 1456 aa32,65■■■□□ 2,82
Cln6-201ENSMUST00000034776 Nop58Q6DFW4 536 aaKnown RBP32,65■■■□□ 2,82
Cln6-201ENSMUST00000034776 Pprc1Q6NZN1 1644 aa32,64■■■□□ 2,82
Cln6-201ENSMUST00000034776 Hecw1Q8K4P8 1604 aa32,64■■■□□ 2,82
Cln6-201ENSMUST00000034776 PtprtQ99M80 1454 aa32,63■■■□□ 2,81
Cln6-201ENSMUST00000034776 Znf608Q56A10 1511 aa32,63■■■□□ 2,81
Cln6-201ENSMUST00000034776 Dhx9O70133 1380 aaKnown RBP32,61■■■□□ 2,81
Cln6-201ENSMUST00000034776 Ssh2Q5SW75 1423 aa32,61■■■□□ 2,81
Cln6-201ENSMUST00000034776 Trak1Q6PD31 939 aa32,6■■■□□ 2,81
Cln6-201ENSMUST00000034776 Rrp7aQ9D1C9 280 aaKnown RBP32,59■■■□□ 2,81
Cln6-201ENSMUST00000034776 Gapvd1Q6PAR5 1458 aa32,59■■■□□ 2,81
Cln6-201ENSMUST00000034776 Map4P27546 1125 aaKnown RBP32,59■■■□□ 2,81
Cln6-201ENSMUST00000034776 Cdc42bpbQ7TT50 1713 aa32,58■■■□□ 2,81
Cln6-201ENSMUST00000034776 DroshaQ5HZJ0 1373 aaKnown RBP32,56■■■□□ 2,8
Cln6-201ENSMUST00000034776 Pelp1Q9DBD5 1123 aaKnown RBP32,56■■■□□ 2,8
Cln6-201ENSMUST00000034776 Kif14L0N7N1 1674 aaKnown RBP32,53■■■□□ 2,8
Cln6-201ENSMUST00000034776 PtprgQ05909 1442 aa32,52■■■□□ 2,8
Cln6-201ENSMUST00000034776 Clstn2Q9ER65 966 aa32,51■■■□□ 2,8
Cln6-201ENSMUST00000034776 Kidins220E9Q9B7 1793 aa32,51■■■□□ 2,79
Cln6-201ENSMUST00000034776 AI481877A2ALV5 1481 aa32,5■■■□□ 2,79
Cln6-201ENSMUST00000034776 Prdm16A2A935 1275 aa32,5■■■□□ 2,79
Cln6-201ENSMUST00000034776 Pabpn1Q8CCS6 302 aaKnown RBP32,48■■■□□ 2,79
Cln6-201ENSMUST00000034776 Ifnlr1Q8CGK5 535 aa32,47■■■□□ 2,79
Cln6-201ENSMUST00000034776 Sin3aQ60520 1274 aaKnown RBP32,46■■■□□ 2,79
Cln6-201ENSMUST00000034776 Zfyve16Q80U44 1528 aa32,44■■■□□ 2,78
Cln6-201ENSMUST00000034776 Asxl1P59598 1514 aa32,44■■■□□ 2,78
Cln6-201ENSMUST00000034776 Mapk8ip2Q9ERE9 830 aa32,39■■■□□ 2,78
Cln6-201ENSMUST00000034776 Mbd5B1AYB6 1498 aa32,39■■■□□ 2,78
Cln6-201ENSMUST00000034776 Cep170Q6A065 1588 aa32,38■■■□□ 2,77
Cln6-201ENSMUST00000034776 Spag9Q58A65 1321 aaKnown RBP32,36■■■□□ 2,77
Cln6-201ENSMUST00000034776 Rgl3Q3UYI5 709 aa32,35■■■□□ 2,77
Cln6-201ENSMUST00000034776 Abca9Q8K449 1623 aa32,34■■■□□ 2,77
Cln6-201ENSMUST00000034776 Dot1lQ6XZL8 1540 aa32,33■■■□□ 2,77
Cln6-201ENSMUST00000034776 Map3k5O35099 1380 aa32,31■■■□□ 2,76
Cln6-201ENSMUST00000034776 Cd109Q8R422 1442 aa32,31■■■□□ 2,76
Cln6-201ENSMUST00000034776 Arid3cA6PWV5 409 aa32,3■■■□□ 2,76
Cln6-201ENSMUST00000034776 Abca17E9PX95 1733 aa32,3■■■□□ 2,76
Retrieved 100 of 22,080 RNA–protein pairs in 32,5 ms