RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Unc13aQ4KUS2 1712 aa17.73■□□□□ 0.43
Vps35-201ENSMUST00000034131 TnnQ80Z71 1560 aa17.73■□□□□ 0.43
Vps35-201ENSMUST00000034131 Prkrip1Q9CWV6 186 aaKnown RBP17.71■□□□□ 0.43
Vps35-201ENSMUST00000034131 Ttll13A4Q9F6 804 aa17.71■□□□□ 0.43
Vps35-201ENSMUST00000034131 Kcnn1Q9EQR3 537 aa17.71■□□□□ 0.43
Vps35-201ENSMUST00000034131 Mroh2bQ7M6Y6 1581 aa17.71■□□□□ 0.42
Vps35-201ENSMUST00000034131 Dnai1Q8C0M8 701 aa17.69■□□□□ 0.42
Vps35-201ENSMUST00000034131 Nkx1-2P42580 305 aa17.68■□□□□ 0.42
Vps35-201ENSMUST00000034131 Mre11Q61216 706 aa17.68■□□□□ 0.42
Vps35-201ENSMUST00000034131 B4galnt3Q6L8S8 986 aa17.68■□□□□ 0.42
Vps35-201ENSMUST00000034131 AU015836B2RUM3 263 aa17.67■□□□□ 0.42
Vps35-201ENSMUST00000034131 Cwc22Q8C5N3 908 aaKnown RBP17.67■□□□□ 0.42
Vps35-201ENSMUST00000034131 Usp47Q8BY87 1376 aa17.66■□□□□ 0.42
Vps35-201ENSMUST00000034131 Mink1Q9JM52 1308 aa17.66■□□□□ 0.42
Vps35-201ENSMUST00000034131 Gm7298A0A0N4SVU1 1476 aa17.65■□□□□ 0.42
Vps35-201ENSMUST00000034131 Kank1E9Q238 1360 aa17.65■□□□□ 0.42
Vps35-201ENSMUST00000034131 Pkd2O35245 966 aa17.64■□□□□ 0.41
Vps35-201ENSMUST00000034131 A2mQ6GQT1 1474 aa17.64■□□□□ 0.41
Vps35-201ENSMUST00000034131 Erbb3Q61526 1339 aa17.63■□□□□ 0.41
Vps35-201ENSMUST00000034131 Ppm1gQ61074 542 aa17.63■□□□□ 0.41
Vps35-201ENSMUST00000034131 Gtf2a1Q99PM3 378 aa17.63■□□□□ 0.41
Vps35-201ENSMUST00000034131 Aebp1Q640N1 1128 aa17.62■□□□□ 0.41
Vps35-201ENSMUST00000034131 Plekhg5Q66T02 1073 aa17.62■□□□□ 0.41
Vps35-201ENSMUST00000034131 Kif15Q6P9L6 1387 aa17.61■□□□□ 0.41
Vps35-201ENSMUST00000034131 Cul7Q8VE73 1689 aa17.6■□□□□ 0.41
Vps35-201ENSMUST00000034131 Mrc2Q64449 1479 aa17.6■□□□□ 0.41
Vps35-201ENSMUST00000034131 Rtn4Q99P72 1162 aaKnown RBP17.6■□□□□ 0.41
Vps35-201ENSMUST00000034131 Rad21Q61550 635 aaKnown RBP17.59■□□□□ 0.41
Vps35-201ENSMUST00000034131 Dbr1Q923B1 550 aa17.59■□□□□ 0.41
Vps35-201ENSMUST00000034131 NudcO35685 332 aaKnown RBP17.57■□□□□ 0.4
Vps35-201ENSMUST00000034131 Dennd4bQ3U1Y4 1499 aa17.57■□□□□ 0.4
Vps35-201ENSMUST00000034131 Lmo7E9PYF4 1699 aaKnown RBP17.56■□□□□ 0.4
Vps35-201ENSMUST00000034131 Carmil1Q6EDY6 1374 aa17.56■□□□□ 0.4
Vps35-201ENSMUST00000034131 Cux1P53564 1515 aa17.56■□□□□ 0.4
Vps35-201ENSMUST00000034131 Zfp444Q3TDV8 331 aaKnown RBP17.56■□□□□ 0.4
Vps35-201ENSMUST00000034131 Ccnb3Q810T2 1396 aa17.56■□□□□ 0.4
Vps35-201ENSMUST00000034131 EspnQ9ET47 871 aa17.56■□□□□ 0.4
Vps35-201ENSMUST00000034131 Camsap1A2AHC3 1581 aa17.55■□□□□ 0.4
Vps35-201ENSMUST00000034131 Mroh3A0A1D5RM54 893 aa17.55■□□□□ 0.4
Vps35-201ENSMUST00000034131 Taok2Q6ZQ29 1240 aa17.53■□□□□ 0.4
Vps35-201ENSMUST00000034131 Mak16Q8BGS0 296 aaKnown RBP17.53■□□□□ 0.4
Vps35-201ENSMUST00000034131 Chmp5Q9D7S9 219 aa17.53■□□□□ 0.4
Vps35-201ENSMUST00000034131 Znf692Q3U381 531 aa17.53■□□□□ 0.4
Vps35-201ENSMUST00000034131 Zbtb7cQ8VCZ7 619 aa17.53■□□□□ 0.4
Vps35-201ENSMUST00000034131 TnikP83510 1323 aa17.53■□□□□ 0.4
Vps35-201ENSMUST00000034131 Rundc1Q0VDN7 615 aa17.52■□□□□ 0.4
Vps35-201ENSMUST00000034131 Rrp9Q91WM3 475 aaKnown RBP17.52■□□□□ 0.4
Vps35-201ENSMUST00000034131 AampJ3QN89 436 aa17.52■□□□□ 0.4
Vps35-201ENSMUST00000034131 Zscan21Q07231 555 aa17.52■□□□□ 0.39
Vps35-201ENSMUST00000034131 Mbd3Q9Z2D8 285 aaKnown RBP17.52■□□□□ 0.39
Vps35-201ENSMUST00000034131 Rprd2Q6NXI6 1469 aaKnown RBP17.51■□□□□ 0.39
Vps35-201ENSMUST00000034131 Gm1043A0A140LJC2 1431 aa17.51■□□□□ 0.39
Vps35-201ENSMUST00000034131 Cux2P70298 1426 aa17.51■□□□□ 0.39
Vps35-201ENSMUST00000034131 Rgl3Q3UYI5 709 aa17.51■□□□□ 0.39
Vps35-201ENSMUST00000034131 Grin2bQ01097 1482 aa17.5■□□□□ 0.39
Vps35-201ENSMUST00000034131 Peg3Q3URU2 1571 aa17.5■□□□□ 0.39
Vps35-201ENSMUST00000034131 Card11Q8CIS0 1159 aa17.5■□□□□ 0.39
Vps35-201ENSMUST00000034131 Zbtb4Q5F293 982 aa17.49■□□□□ 0.39
Vps35-201ENSMUST00000034131 Rpgrip1lQ8CG73 1264 aa17.49■□□□□ 0.39
Vps35-201ENSMUST00000034131 Dnttip2Q8R2M2 758 aaKnown RBP17.48■□□□□ 0.39
Vps35-201ENSMUST00000034131 Dapk1Q80YE7 1442 aa17.48■□□□□ 0.39
Vps35-201ENSMUST00000034131 Pdlim2Q8R1G6 349 aa17.47■□□□□ 0.39
Vps35-201ENSMUST00000034131 Fhod3Q76LL6 1578 aa17.47■□□□□ 0.39
Vps35-201ENSMUST00000034131 Htatsf1Q8BGC0 757 aa17.46■□□□□ 0.39
Vps35-201ENSMUST00000034131 Zfp644E9QA22 1323 aa17.46■□□□□ 0.39
Vps35-201ENSMUST00000034131 Trim30dE9PWL0 497 aa17.46■□□□□ 0.39
Vps35-201ENSMUST00000034131 DmtnQ9WV69 405 aa17.46■□□□□ 0.39
Vps35-201ENSMUST00000034131 Rock2P70336 1388 aa17.45■□□□□ 0.38
Vps35-201ENSMUST00000034131 Lamc3Q9R0B6 1581 aa17.45■□□□□ 0.38
Vps35-201ENSMUST00000034131 Hsp90ab1P11499 724 aaKnown RBP17.45■□□□□ 0.38
Vps35-201ENSMUST00000034131 Cabp1Q9JLK7 227 aa17.45■□□□□ 0.38
Vps35-201ENSMUST00000034131 Eif2s2Q99L45 331 aaKnown RBP17.45■□□□□ 0.38
Vps35-201ENSMUST00000034131 Myom3A2ABU4 1439 aa17.44■□□□□ 0.38
Vps35-201ENSMUST00000034131 Npm1Q61937 292 aaKnown RBP17.44■□□□□ 0.38
Vps35-201ENSMUST00000034131 Disp1Q3TDN0 1521 aa17.43■□□□□ 0.38
Vps35-201ENSMUST00000034131 Urb2E9Q7L1 1524 aaKnown RBP17.42■□□□□ 0.38
Vps35-201ENSMUST00000034131 ArxO35085 564 aa17.42■□□□□ 0.38
Vps35-201ENSMUST00000034131 Mug1P28665 1476 aa17.41■□□□□ 0.38
Vps35-201ENSMUST00000034131 Spryd3E9Q9B3 442 aa17.41■□□□□ 0.38
Vps35-201ENSMUST00000034131 Ipo8Q7TMY7 1010 aa17.4■□□□□ 0.38
Vps35-201ENSMUST00000034131 SynmQ70IV5 1561 aa17.39■□□□□ 0.37
Vps35-201ENSMUST00000034131 Dhx57Q6P5D3 1388 aaKnown RBP17.39■□□□□ 0.37
Vps35-201ENSMUST00000034131 Zfp777B9EKF4 885 aa17.38■□□□□ 0.37
Vps35-201ENSMUST00000034131 Phf14Q9D4H9 881 aa17.38■□□□□ 0.37
Vps35-201ENSMUST00000034131 Rwdd1Q9CQK7 243 aa17.38■□□□□ 0.37
Vps35-201ENSMUST00000034131 Q7TT23 1179 aa17.38■□□□□ 0.37
Vps35-201ENSMUST00000034131 Ift140E9PY46 1464 aa17.37■□□□□ 0.37
Vps35-201ENSMUST00000034131 Setbp1Q9Z180 1582 aa17.37■□□□□ 0.37
Vps35-201ENSMUST00000034131 Grwd1Q810D6 446 aaKnown RBP17.37■□□□□ 0.37
Vps35-201ENSMUST00000034131 Ak7Q9D2H2 614 aa17.37■□□□□ 0.37
Vps35-201ENSMUST00000034131 Kdm2bQ6P1G2 1309 aa17.36■□□□□ 0.37
Vps35-201ENSMUST00000034131 4933402E13RikQ9D4D2 429 aa17.36■□□□□ 0.37
Vps35-201ENSMUST00000034131 4930567H17RikQ3V0K5 233 aa17.36■□□□□ 0.37
Vps35-201ENSMUST00000034131 Pik3c2gO70167 1506 aa17.35■□□□□ 0.37
Vps35-201ENSMUST00000034131 Apbb1Q9QXJ1 710 aa17.34■□□□□ 0.37
Vps35-201ENSMUST00000034131 Mapk8ip3Q9ESN9 1337 aa17.33■□□□□ 0.37
Vps35-201ENSMUST00000034131 Gm6268A2A3U9 297 aa17.33■□□□□ 0.36
Vps35-201ENSMUST00000034131 Rfx7F8VPJ6 1459 aa17.32■□□□□ 0.36
Vps35-201ENSMUST00000034131 Kif20aP97329 887 aa17.32■□□□□ 0.36
Vps35-201ENSMUST00000034131 Ppp1r9bQ6R891 817 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms