RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Eif5bQ05D44 1216 aaKnown RBP14.85□□□□□ -0.03
Ptcd1-201ENSMUST00000031628 Mphosph9A6H5Y1 991 aa14.84□□□□□ -0.03
Ptcd1-201ENSMUST00000031628 UacaQ8CGB3 1411 aa14.83□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 Ankrd36D3Z4K0 1415 aa14.82□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 Shroom2A2ALU4 1481 aa14.81□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 Rtl5Q5DTT4 599 aa14.81□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 Rusc2Q80U22 1514 aa14.81□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 BC005561E9Q5E2 1589 aa14.81□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 Stra8P70278 393 aa14.81□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 Zbtb7cQ8VCZ7 619 aa14.79□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 Plppr3Q7TPB0 716 aa14.79□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 NexmifQ5DTT1 1515 aa14.79□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 Fkbp15Q6P9Q6 1216 aaKnown RBP14.78□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 Dennd4bQ3U1Y4 1499 aa14.77□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 Eif4g3Q80XI3 1579 aaKnown RBP14.77□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 Ncoa3O09000 1398 aa14.77□□□□□ -0.04
Ptcd1-201ENSMUST00000031628 Pkd2O35245 966 aa14.76□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 Rapgef6Q5NCJ1 1609 aa14.76□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 Mug1P28665 1476 aa14.76□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 Naip5Q9R016 1403 aa14.75□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 Gcc2Q8CHG3 1679 aa14.74□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 Wwc2Q6NXJ0 1187 aa14.74□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 P3h3Q8CG70 732 aa14.74□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 Mrs2Q5NCE8 434 aa14.73□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 Plcd4Q8K3R3 807 aa14.73□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 Gtf3c3Q3TMP1 882 aa14.72□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 Calr4Q3TQS0 420 aa14.72□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 Smg6P61406 1418 aaKnown RBP14.72□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 Ncoa2Q61026 1462 aa14.72□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 Map3k4O08648 1597 aa14.71□□□□□ -0.05
Ptcd1-201ENSMUST00000031628 CatipB9EKE5 520 aa14.71□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Rgl3Q3UYI5 709 aa14.71□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Zbtb4Q5F293 982 aa14.71□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Arhgap31A6X8Z5 1425 aa14.71□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Arhgef11Q68FM7 1552 aa14.7□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Usp47Q8BY87 1376 aa14.7□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Dnmt1P13864 1620 aaKnown RBP14.7□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Cdc42bpaQ3UU96 1719 aa14.66□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Kiaa1551Q5DTW7 1521 aa14.66□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Zcchc11B2RX14 1644 aaKnown RBP14.66□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Jph4Q80WT0 628 aa14.65□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Neo1P97798 1493 aa14.65□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Arhgef40Q3UPH7 1517 aa14.65□□□□□ -0.06
Ptcd1-201ENSMUST00000031628 Fgd6Q69ZL1 1399 aa14.64□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Abcc5Q9R1X5 1436 aa14.64□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Fam163aQ8CAA5 168 aa14.64□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Nolc1E9Q5C9 702 aaKnown RBP14.64□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Anp32aO35381 247 aa14.64□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Grwd1Q810D6 446 aaKnown RBP14.64□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Exoc6Q8R313 802 aa14.64□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Mtus2Q3UHD3 1353 aa14.63□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Magi1Q6RHR9 1471 aa14.63□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Mroh2aD3Z750 1679 aa14.62□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Ccdc141E9Q8Q6 1531 aa14.62□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Plekhh2Q8C115 1491 aa14.62□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Dhx57Q6P5D3 1388 aaKnown RBP14.61□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Trak1Q6PD31 939 aa14.61□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Mapkbp1Q6NS57 1503 aa14.6□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Pelp1Q9DBD5 1123 aaKnown RBP14.6□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Ttbk1Q6PCN3 1308 aa14.6□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 AknaQ80VW7 1404 aa14.6□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Arhgef12Q8R4H2 1543 aaKnown RBP14.6□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Slc4a2P13808 1237 aaKnown RBP14.6□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Dhx9O70133 1380 aaKnown RBP14.6□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Kdm6bQ5NCY0 1641 aa14.6□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Adcy10Q8C0T9 1614 aa14.59□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Rfx7F8VPJ6 1459 aa14.59□□□□□ -0.07
Ptcd1-201ENSMUST00000031628 Cul7Q8VE73 1689 aa14.58□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Ppp4r2Q0VGB7 417 aa14.57□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Prex2Q3LAC4 1598 aa14.57□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Rrbp1Q99PL5 1605 aaKnown RBP14.56□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Gtf3c5Q8R2T8 520 aa14.56□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Fhod3Q76LL6 1578 aa14.56□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Adgrb2Q8CGM1 1561 aa14.55□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Rundc1Q0VDN7 615 aa14.55□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Upf2A2AT37 1269 aaKnown RBP14.54□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Il16O54824 1322 aa14.54□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Ttll5Q8CHB8 1328 aa14.54□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Tdrd9Q14BI7 1383 aa14.53□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 SphkapQ6NSW3 1687 aa14.52□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Camsap2Q8C1B1 1461 aa14.52□□□□□ -0.08
Ptcd1-201ENSMUST00000031628 Rprd2Q6NXI6 1469 aaKnown RBP14.52□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Gm14025A2AP89 1413 aa14.51□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Mlh3A0A1Y7VMP7 1443 aa14.51□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Fancd2Q80V62 1450 aa14.51□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Irx3P81067 507 aa14.5□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Ncoa1P70365 1447 aa14.5□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Card11Q8CIS0 1159 aa14.5□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Kdm3bQ6ZPY7 1562 aa14.49□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Pprc1Q6NZN1 1644 aa14.48□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Slc4a3P16283 1227 aa14.48□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Gm13695A2AK44 830 aa14.48□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Zfp777B9EKF4 885 aa14.48□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Setbp1Q9Z180 1582 aa14.47□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Abcc1O35379 1528 aa14.47□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Caskin1Q6P9K8 1431 aa14.47□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Dapk1Q80YE7 1442 aa14.47□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Fam208aQ69ZR9 1610 aaKnown RBP14.46□□□□□ -0.09
Ptcd1-201ENSMUST00000031628 Map4P27546 1125 aaKnown RBP14.45□□□□□ -0.1
Ptcd1-201ENSMUST00000031628 Ipo4Q8VI75 1082 aa14.45□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms