RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Lmo7E9PYF4 1699 aaKnown RBP10.99□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 UacaQ8CGB3 1411 aa10.98□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Ncoa2Q61026 1462 aa10.98□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Fam163aQ8CAA5 168 aa10.97□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Naip2Q9QUK4 1447 aa10.96□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Ccdc141E9Q8Q6 1531 aa10.96□□□□□ -0.65
Ccdc39-201ENSMUST00000029222 Clstn2Q9ER65 966 aa10.95□□□□□ -0.66
Ccdc39-201ENSMUST00000029222 Vps8Q0P5W1 1427 aa10.95□□□□□ -0.66
Ccdc39-201ENSMUST00000029222 Magi1Q6RHR9 1471 aa10.95□□□□□ -0.66
Ccdc39-201ENSMUST00000029222 Adamts12Q811B3 1600 aa10.94□□□□□ -0.66
Ccdc39-201ENSMUST00000029222 Abcc5Q9R1X5 1436 aa10.94□□□□□ -0.66
Ccdc39-201ENSMUST00000029222 Nup155Q99P88 1391 aaKnown RBP10.93□□□□□ -0.66
Ccdc39-201ENSMUST00000029222 Abca5Q8K448 1642 aa10.91□□□□□ -0.66
Ccdc39-201ENSMUST00000029222 Rusc2Q80U22 1514 aa10.91□□□□□ -0.66
Ccdc39-201ENSMUST00000029222 Ppp1r18Q8BQ30 594 aa10.91□□□□□ -0.66
Ccdc39-201ENSMUST00000029222 Lemd3Q9WU40 921 aa10.9□□□□□ -0.66
Ccdc39-201ENSMUST00000029222 Usp47Q8BY87 1376 aa10.9□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Kdm2aP59997 1161 aa10.89□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Kif3bQ61771 747 aa10.89□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Map3k5O35099 1380 aa10.88□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Prdm10Q3UTQ7 1184 aa10.88□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Rapgef6Q5NCJ1 1609 aa10.88□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Abca16E9PWJ7 1678 aa10.88□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Ttll5Q8CHB8 1328 aa10.87□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Arhgef40Q3UPH7 1517 aa10.87□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Mroh3A0A1D5RM54 893 aa10.87□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Arhgap5P97393 1501 aa10.87□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Gm13697A2AK42 830 aa10.86□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Stk24Q99KH8 431 aa10.86□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Prex2Q3LAC4 1598 aa10.86□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Abcc2Q8VI47 1543 aa10.86□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Atp1b4Q99ME6 356 aa10.86□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Ythdc2B2RR83 1445 aaKnown RBP10.85□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Dhx9O70133 1380 aaKnown RBP10.85□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Card11Q8CIS0 1159 aa10.85□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 NrdcQ8BHG1 1161 aa10.84□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Spag9Q58A65 1321 aaKnown RBP10.84□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Rundc1Q0VDN7 615 aa10.84□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Peg3Q3URU2 1571 aa10.84□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Lmtk2Q3TYD6 1471 aa10.84□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Ankrd36D3Z4K0 1415 aa10.84□□□□□ -0.67
Ccdc39-201ENSMUST00000029222 Il16O54824 1322 aa10.82□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Eif5bQ05D44 1216 aaKnown RBP10.82□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Arhgef12Q8R4H2 1543 aaKnown RBP10.82□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Pbrm1Q8BSQ9 1634 aaKnown RBP10.82□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Stra8P70278 393 aa10.82□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Abcc1O35379 1528 aa10.82□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Setd1bQ8CFT2 1985 aa10.82□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Trappc8E9PWG2 1437 aa10.81□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Ifit1bl1D3Z6F0 470 aa10.81□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Atp10dQ8K2X1 1416 aa10.81□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Fancd2Q80V62 1450 aa10.81□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Pde4cQ3UEI1 686 aa10.79□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Kdm5bQ80Y84 1544 aa10.79□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Eif4g3Q80XI3 1579 aaKnown RBP10.79□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Mrs2Q5NCE8 434 aa10.79□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Adgrb2Q8CGM1 1561 aa10.78□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Adcy10Q8C0T9 1614 aa10.77□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Gm156Q58A37 223 aa10.77□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Mlh3A0A1Y7VMP7 1443 aa10.77□□□□□ -0.68
Ccdc39-201ENSMUST00000029222 Arhgef11Q68FM7 1552 aa10.77□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Igf1rQ60751 1373 aa10.76□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Wwc2Q6NXJ0 1187 aa10.76□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 P3h3Q8CG70 732 aa10.75□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Map3k4O08648 1597 aa10.74□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Gm20521D3Z5F7 333 aa10.74□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Kdm6bQ5NCY0 1641 aa10.74□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Anp32bQ9EST5 272 aaKnown RBP10.73□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Gapvd1Q6PAR5 1458 aa10.73□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Prdm16A2A935 1275 aa10.73□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Hdac5Q9Z2V6 1113 aa10.73□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Rfx7F8VPJ6 1459 aa10.73□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Znf608Q56A10 1511 aa10.72□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Caskin1Q6P9K8 1431 aa10.72□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Mapkbp1Q6NS57 1503 aa10.72□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Dnmt1P13864 1620 aaKnown RBP10.72□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Cd109Q8R422 1442 aa10.72□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Anks4bQ8K3X6 423 aa10.71□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Srpk2O54781 681 aaKnown RBP10.71□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Cwc22Q8C5N3 908 aaKnown RBP10.71□□□□□ -0.69
Ccdc39-201ENSMUST00000029222 Mroh2aD3Z750 1679 aa10.71□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Gm13695A2AK44 830 aa10.71□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Gm38655A0A286YDK6 273 aa10.7□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Dapk1Q80YE7 1442 aa10.7□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Safb2Q80YR5 991 aaKnown RBP10.7□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Kiaa1551Q5DTW7 1521 aa10.7□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Naip5Q9R016 1403 aa10.69□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Csrnp3P59055 597 aa10.69□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Gcc2Q8CHG3 1679 aa10.68□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Sall3Q62255 1320 aa10.68□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Kdm3bQ6ZPY7 1562 aa10.68□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Dennd4bQ3U1Y4 1499 aa10.68□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Fan1Q69ZT1 1020 aa10.67□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Cnga1P29974 684 aa10.67□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Ssh2Q5SW75 1423 aa10.67□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 PtprtQ99M80 1454 aa10.66□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Wdr7Q920I9 1489 aa10.66□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Exoc6Q8R313 802 aa10.65□□□□□ -0.7
Ccdc39-201ENSMUST00000029222 Stk26Q99JT2 416 aa10.65□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Rprd2Q6NXI6 1469 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms