RNA–Protein interactions for RNA: ENSMUST00000005532.8

Nid1-201, Transcript of Nidogen-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nid1, Length 6,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1-201ENSMUST00000005532 Taok2Q6ZQ29 1240 aa19.28■□□□□ 0.68
Nid1-201ENSMUST00000005532 Rsf1E9PWW9 1441 aaKnown RBP19.28■□□□□ 0.68
Nid1-201ENSMUST00000005532 Arhgap27A2AB59 869 aa19.27■□□□□ 0.67
Nid1-201ENSMUST00000005532 Rundc1Q0VDN7 615 aa19.25■□□□□ 0.67
Nid1-201ENSMUST00000005532 Baz1aO88379 1555 aa19.25■□□□□ 0.67
Nid1-201ENSMUST00000005532 Gtf3c3Q3TMP1 882 aa19.25■□□□□ 0.67
Nid1-201ENSMUST00000005532 Fhad1A6PWD2 1420 aa19.24■□□□□ 0.67
Nid1-201ENSMUST00000005532 Ccdc18Q640L5 1455 aa19.23■□□□□ 0.67
Nid1-201ENSMUST00000005532 NgefQ8CHT1 710 aa19.23■□□□□ 0.67
Nid1-201ENSMUST00000005532 Mfap1aC0HKD8 439 aaKnown RBP19.23■□□□□ 0.67
Nid1-201ENSMUST00000005532 Mfap1bC0HKD9 439 aaKnown RBP19.23■□□□□ 0.67
Nid1-201ENSMUST00000005532 Zfp777B9EKF4 885 aa19.22■□□□□ 0.67
Nid1-201ENSMUST00000005532 Sin3aQ60520 1274 aaKnown RBP19.21■□□□□ 0.67
Nid1-201ENSMUST00000005532 Kiaa0754Q69ZZ9 979 aa19.2■□□□□ 0.66
Nid1-201ENSMUST00000005532 Nolc1E9Q5C9 702 aaKnown RBP19.2■□□□□ 0.66
Nid1-201ENSMUST00000005532 Zscan21Q07231 555 aa19.19■□□□□ 0.66
Nid1-201ENSMUST00000005532 RdxP26043 583 aaKnown RBP19.18■□□□□ 0.66
Nid1-201ENSMUST00000005532 Ddrgk1Q80WW9 315 aa19.18■□□□□ 0.66
Nid1-201ENSMUST00000005532 Rassf8Q8CJ96 419 aa19.17■□□□□ 0.66
Nid1-201ENSMUST00000005532 Tmf1B9EKI3 1091 aa19.16■□□□□ 0.66
Nid1-201ENSMUST00000005532 Pkd2O35245 966 aa19.16■□□□□ 0.66
Nid1-201ENSMUST00000005532 ChgaP26339 463 aaKnown RBP19.16■□□□□ 0.66
Nid1-201ENSMUST00000005532 Anapc15P60007 132 aa19.16■□□□□ 0.66
Nid1-201ENSMUST00000005532 SlkO54988 1233 aa19.16■□□□□ 0.66
Nid1-201ENSMUST00000005532 Cluap1Q8R3P7 413 aa19.16■□□□□ 0.66
Nid1-201ENSMUST00000005532 CgnP59242 1191 aa19.15■□□□□ 0.66
Nid1-201ENSMUST00000005532 Cald1E9QA15 768 aaKnown RBP19.14■□□□□ 0.66
Nid1-201ENSMUST00000005532 U2surpQ6NV83 1029 aaKnown RBP19.14■□□□□ 0.66
Nid1-201ENSMUST00000005532 Sart3Q9JLI8 962 aaKnown RBP19.14■□□□□ 0.65
Nid1-201ENSMUST00000005532 NacadQ5SWP3 1504 aa19.14■□□□□ 0.65
Nid1-201ENSMUST00000005532 4933402E13RikQ9D4D2 429 aa19.13■□□□□ 0.65
Nid1-201ENSMUST00000005532 Becn1O88597 448 aa19.11■□□□□ 0.65
Nid1-201ENSMUST00000005532 SetQ9EQU5 289 aaKnown RBP19.11■□□□□ 0.65
Nid1-201ENSMUST00000005532 VgfQ0VGU4 617 aa19.1■□□□□ 0.65
Nid1-201ENSMUST00000005532 Golga2Q921M4 999 aa19.1■□□□□ 0.65
Nid1-201ENSMUST00000005532 Iffo2Q8R2V2 512 aa19.09■□□□□ 0.65
Nid1-201ENSMUST00000005532 Gpatch11Q3UFS4 262 aa19.09■□□□□ 0.65
Nid1-201ENSMUST00000005532 Tmco5bQ80X59 307 aa19.09■□□□□ 0.65
Nid1-201ENSMUST00000005532 Rtf1A2AQ19 715 aaKnown RBP19.09■□□□□ 0.65
Nid1-201ENSMUST00000005532 Trim30aP15533 496 aa19.08■□□□□ 0.65
Nid1-201ENSMUST00000005532 Pde3bQ61409 1100 aa19.07■□□□□ 0.64
Nid1-201ENSMUST00000005532 GorabQ8BRM2 368 aa19.07■□□□□ 0.64
Nid1-201ENSMUST00000005532 Smarce1O54941 411 aaKnown RBP19.07■□□□□ 0.64
Nid1-201ENSMUST00000005532 Map4P27546 1125 aaKnown RBP19.07■□□□□ 0.64
Nid1-201ENSMUST00000005532 Znf330Q922H9 316 aa19.07■□□□□ 0.64
Nid1-201ENSMUST00000005532 R3hcc1Q8BSI6 488 aa19.06■□□□□ 0.64
Nid1-201ENSMUST00000005532 U2af1Q9D883 239 aaKnown RBP19.05■□□□□ 0.64
Nid1-201ENSMUST00000005532 Ifit1bl1D3Z6F0 470 aa19.05■□□□□ 0.64
Nid1-201ENSMUST00000005532 Gtf2e1Q9D0D5 440 aa19.05■□□□□ 0.64
Nid1-201ENSMUST00000005532 CrbnQ8C7D2 445 aa19.04■□□□□ 0.64
Nid1-201ENSMUST00000005532 CntlnA2AM05 1397 aa19.03■□□□□ 0.64
Nid1-201ENSMUST00000005532 Map7d2A2AG50 781 aa19.02■□□□□ 0.63
Nid1-201ENSMUST00000005532 Tpm3-rs7D3Z2H9 248 aa19.01■□□□□ 0.63
Nid1-201ENSMUST00000005532 Mphosph9A6H5Y1 991 aa19.01■□□□□ 0.63
Nid1-201ENSMUST00000005532 Plin1Q8CGN5 517 aa19.01■□□□□ 0.63
Nid1-201ENSMUST00000005532 Arhgap35Q91YM2 1499 aa19.01■□□□□ 0.63
Nid1-201ENSMUST00000005532 MecomP14404 1042 aa19■□□□□ 0.63
Nid1-201ENSMUST00000005532 Ush1cQ9ES64 910 aa19■□□□□ 0.63
Nid1-201ENSMUST00000005532 Cspp1B2RX88 1205 aa18.99■□□□□ 0.63
Nid1-201ENSMUST00000005532 Ecm2Q5FW85 670 aa18.99■□□□□ 0.63
Nid1-201ENSMUST00000005532 Dcaf11Q91VU6 549 aa18.99■□□□□ 0.63
Nid1-201ENSMUST00000005532 Ercc6F8VPZ5 1481 aa18.99■□□□□ 0.63
Nid1-201ENSMUST00000005532 Baz1bQ9Z277 1479 aa18.98■□□□□ 0.63
Nid1-201ENSMUST00000005532 Cep162Q6ZQ06 1403 aa18.98■□□□□ 0.63
Nid1-201ENSMUST00000005532 Rsph3aQ3UFY4 516 aa18.98■□□□□ 0.63
Nid1-201ENSMUST00000005532 Mre11Q61216 706 aa18.98■□□□□ 0.63
Nid1-201ENSMUST00000005532 CrebrfQ8CDG5 640 aaKnown RBP18.97■□□□□ 0.63
Nid1-201ENSMUST00000005532 Pknox2Q8BG99 474 aa18.97■□□□□ 0.63
Nid1-201ENSMUST00000005532 Ylpm1Q9R0I7 1386 aaKnown RBP18.97■□□□□ 0.63
Nid1-201ENSMUST00000005532 Rock2P70336 1388 aa18.96■□□□□ 0.63
Nid1-201ENSMUST00000005532 Kif27Q7M6Z4 1394 aa18.96■□□□□ 0.63
Nid1-201ENSMUST00000005532 Fyco1Q8VDC1 1437 aa18.96■□□□□ 0.63
Nid1-201ENSMUST00000005532 Atp6v1dP57746 247 aa18.96■□□□□ 0.63
Nid1-201ENSMUST00000005532 Ccar1Q8CH18 1146 aaKnown RBP18.96■□□□□ 0.63
Nid1-201ENSMUST00000005532 Ksr2Q3UVC0 959 aa18.95■□□□□ 0.62
Nid1-201ENSMUST00000005532 Q3TQI7 289 aaKnown RBP18.94■□□□□ 0.62
Nid1-201ENSMUST00000005532 Trak1Q6PD31 939 aa18.94■□□□□ 0.62
Nid1-201ENSMUST00000005532 Stk26Q99JT2 416 aa18.92■□□□□ 0.62
Nid1-201ENSMUST00000005532 Tnnt1O88346 262 aa18.91■□□□□ 0.62
Nid1-201ENSMUST00000005532 Eif4g2Q62448 906 aaKnown RBP18.9■□□□□ 0.62
Nid1-201ENSMUST00000005532 Fbxo2Q80UW2 297 aa18.9■□□□□ 0.62
Nid1-201ENSMUST00000005532 Smg6P61406 1418 aaKnown RBP18.9■□□□□ 0.62
Nid1-201ENSMUST00000005532 Ccdc88bQ4QRL3 1481 aa18.9■□□□□ 0.62
Nid1-201ENSMUST00000005532 Sf3a1Q8K4Z5 791 aaKnown RBP18.9■□□□□ 0.62
Nid1-201ENSMUST00000005532 MyclP10166 368 aa18.89■□□□□ 0.61
Nid1-201ENSMUST00000005532 Brpf1B2RRD7 1212 aa18.88■□□□□ 0.61
Nid1-201ENSMUST00000005532 Tpm3P21107 285 aaKnown RBP18.87■□□□□ 0.61
Nid1-201ENSMUST00000005532 Birc3O08863 600 aa18.87■□□□□ 0.61
Nid1-201ENSMUST00000005532 Senp3Q9EP97 568 aaKnown RBP18.86■□□□□ 0.61
Nid1-201ENSMUST00000005532 Aebp1Q640N1 1128 aa18.86■□□□□ 0.61
Nid1-201ENSMUST00000005532 Cgnl1Q6AW69 1298 aa18.86■□□□□ 0.61
Nid1-201ENSMUST00000005532 Nol10Q5RJG1 687 aaKnown RBP18.86■□□□□ 0.61
Nid1-201ENSMUST00000005532 Cabp1Q9JLK7 227 aa18.86■□□□□ 0.61
Nid1-201ENSMUST00000005532 Spag9Q58A65 1321 aaKnown RBP18.85■□□□□ 0.61
Nid1-201ENSMUST00000005532 Ccdc146E9Q9F7 977 aa18.85■□□□□ 0.61
Nid1-201ENSMUST00000005532 PrkcshO08795 521 aa18.85■□□□□ 0.61
Nid1-201ENSMUST00000005532 Ccer1Q9CQL2 403 aa18.84■□□□□ 0.61
Nid1-201ENSMUST00000005532 Mical1Q8VDP3 1048 aa18.83■□□□□ 0.61
Nid1-201ENSMUST00000005532 Casq1O09165 405 aa18.83■□□□□ 0.6
Nid1-201ENSMUST00000005532 St18Q80TY4 1045 aa18.82■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms