RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Cnga1P29974 684 aa16.46■□□□□ 0.23
Msh6-201ENSMUST00000005503 Speer4f1Q9D5Q6 258 aa16.46■□□□□ 0.23
Msh6-201ENSMUST00000005503 Ifit1bl1D3Z6F0 470 aa16.45■□□□□ 0.22
Msh6-201ENSMUST00000005503 Kcnh8P59111 1102 aa16.45■□□□□ 0.22
Msh6-201ENSMUST00000005503 Zfp644E9QA22 1323 aa16.45■□□□□ 0.22
Msh6-201ENSMUST00000005503 Cux2P70298 1426 aa16.45■□□□□ 0.22
Msh6-201ENSMUST00000005503 PtprkP35822 1457 aa16.44■□□□□ 0.22
Msh6-201ENSMUST00000005503 Gm20521D3Z5F7 333 aa16.44■□□□□ 0.22
Msh6-201ENSMUST00000005503 Ecm2Q5FW85 670 aa16.44■□□□□ 0.22
Msh6-201ENSMUST00000005503 Plcb2A3KGF7 1181 aa16.42■□□□□ 0.22
Msh6-201ENSMUST00000005503 Gtf3c3Q3TMP1 882 aa16.42■□□□□ 0.22
Msh6-201ENSMUST00000005503 Htatsf1Q8BGC0 757 aa16.42■□□□□ 0.22
Msh6-201ENSMUST00000005503 Fhad1A6PWD2 1420 aa16.41■□□□□ 0.22
Msh6-201ENSMUST00000005503 EspnQ9ET47 871 aa16.41■□□□□ 0.22
Msh6-201ENSMUST00000005503 Ythdc1E9Q5K9 736 aaKnown RBP16.4■□□□□ 0.22
Msh6-201ENSMUST00000005503 Washc2Q6PGL7 1334 aa16.39■□□□□ 0.21
Msh6-201ENSMUST00000005503 Ankrd36D3Z4K0 1415 aa16.38■□□□□ 0.21
Msh6-201ENSMUST00000005503 Stk24Q99KH8 431 aa16.38■□□□□ 0.21
Msh6-201ENSMUST00000005503 Srpk2O54781 681 aaKnown RBP16.37■□□□□ 0.21
Msh6-201ENSMUST00000005503 Trim44Q9QXA7 346 aa16.37■□□□□ 0.21
Msh6-201ENSMUST00000005503 Atad2bE9Q166 1460 aaKnown RBP16.37■□□□□ 0.21
Msh6-201ENSMUST00000005503 Arhgef5E9Q7D5 1581 aa16.35■□□□□ 0.21
Msh6-201ENSMUST00000005503 Mbd3Q9Z2D8 285 aaKnown RBP16.34■□□□□ 0.21
Msh6-201ENSMUST00000005503 UacaQ8CGB3 1411 aa16.34■□□□□ 0.21
Msh6-201ENSMUST00000005503 Rpgrip1lQ8CG73 1264 aa16.34■□□□□ 0.21
Msh6-201ENSMUST00000005503 Esx1O88933 382 aa16.33■□□□□ 0.21
Msh6-201ENSMUST00000005503 Sart3Q9JLI8 962 aaKnown RBP16.33■□□□□ 0.21
Msh6-201ENSMUST00000005503 Shroom4Q1W617 1475 aa16.33■□□□□ 0.2
Msh6-201ENSMUST00000005503 Pank3Q8R2W9 370 aa16.32■□□□□ 0.2
Msh6-201ENSMUST00000005503 Top2bQ64511 1612 aa16.32■□□□□ 0.2
Msh6-201ENSMUST00000005503 Inpp5dQ9ES52 1191 aa16.32■□□□□ 0.2
Msh6-201ENSMUST00000005503 Iqgap2Q3UQ44 1575 aa16.32■□□□□ 0.2
Msh6-201ENSMUST00000005503 Slc4a1apE9PX68 744 aa16.32■□□□□ 0.2
Msh6-201ENSMUST00000005503 Dnttip2Q8R2M2 758 aaKnown RBP16.32■□□□□ 0.2
Msh6-201ENSMUST00000005503 Cluap1Q8R3P7 413 aa16.32■□□□□ 0.2
Msh6-201ENSMUST00000005503 Dapk1Q80YE7 1442 aa16.32■□□□□ 0.2
Msh6-201ENSMUST00000005503 BicraF8VPZ9 1578 aa16.31■□□□□ 0.2
Msh6-201ENSMUST00000005503 PnisrA2AJT4 805 aaKnown RBP16.31■□□□□ 0.2
Msh6-201ENSMUST00000005503 LrpprcQ6PB66 1392 aaKnown RBP16.31■□□□□ 0.2
Msh6-201ENSMUST00000005503 Tmf1B9EKI3 1091 aa16.31■□□□□ 0.2
Msh6-201ENSMUST00000005503 Plekhh2Q8C115 1491 aa16.31■□□□□ 0.2
Msh6-201ENSMUST00000005503 Vps8Q0P5W1 1427 aa16.3■□□□□ 0.2
Msh6-201ENSMUST00000005503 Dhx29Q6PGC1 1365 aaKnown RBP16.3■□□□□ 0.2
Msh6-201ENSMUST00000005503 Gm6268A2A3U9 297 aa16.3■□□□□ 0.2
Msh6-201ENSMUST00000005503 Nup155Q99P88 1391 aaKnown RBP16.3■□□□□ 0.2
Msh6-201ENSMUST00000005503 Dcaf11Q91VU6 549 aa16.29■□□□□ 0.2
Msh6-201ENSMUST00000005503 Lmod3E9QA62 571 aa16.28■□□□□ 0.2
Msh6-201ENSMUST00000005503 Ipo8Q7TMY7 1010 aa16.27■□□□□ 0.2
Msh6-201ENSMUST00000005503 Q7TT23 1179 aa16.27■□□□□ 0.2
Msh6-201ENSMUST00000005503 Plcd4Q8K3R3 807 aa16.26■□□□□ 0.19
Msh6-201ENSMUST00000005503 AU015836B2RUM3 263 aa16.25■□□□□ 0.19
Msh6-201ENSMUST00000005503 Exosc9Q9JHI7 438 aaKnown RBP16.25■□□□□ 0.19
Msh6-201ENSMUST00000005503 Rock2P70336 1388 aa16.25■□□□□ 0.19
Msh6-201ENSMUST00000005503 Golga2Q921M4 999 aa16.25■□□□□ 0.19
Msh6-201ENSMUST00000005503 Srcin1Q9QWI6 1250 aa16.25■□□□□ 0.19
Msh6-201ENSMUST00000005503 Fgd1P52734 960 aa16.24■□□□□ 0.19
Msh6-201ENSMUST00000005503 AqrQ8CFQ3 1481 aaKnown RBP16.24■□□□□ 0.19
Msh6-201ENSMUST00000005503 Ttll13A4Q9F6 804 aa16.24■□□□□ 0.19
Msh6-201ENSMUST00000005503 Eif2s2Q99L45 331 aaKnown RBP16.23■□□□□ 0.19
Msh6-201ENSMUST00000005503 Znf330Q922H9 316 aa16.23■□□□□ 0.19
Msh6-201ENSMUST00000005503 Tiam1Q60610 1591 aa16.23■□□□□ 0.19
Msh6-201ENSMUST00000005503 Senp3Q9EP97 568 aaKnown RBP16.22■□□□□ 0.19
Msh6-201ENSMUST00000005503 Stag3O70576 1240 aa16.22■□□□□ 0.19
Msh6-201ENSMUST00000005503 L3mbtl2P59178 703 aa16.22■□□□□ 0.19
Msh6-201ENSMUST00000005503 Mapk8ip3Q9ESN9 1337 aa16.21■□□□□ 0.19
Msh6-201ENSMUST00000005503 NudcO35685 332 aaKnown RBP16.21■□□□□ 0.19
Msh6-201ENSMUST00000005503 Zfp444Q3TDV8 331 aaKnown RBP16.21■□□□□ 0.19
Msh6-201ENSMUST00000005503 PtmaP26350 111 aa16.2■□□□□ 0.18
Msh6-201ENSMUST00000005503 Mfap1aC0HKD8 439 aaKnown RBP16.2■□□□□ 0.18
Msh6-201ENSMUST00000005503 Mfap1bC0HKD9 439 aaKnown RBP16.2■□□□□ 0.18
Msh6-201ENSMUST00000005503 IqubQ8CDK3 788 aa16.19■□□□□ 0.18
Msh6-201ENSMUST00000005503 Gtf2e1Q9D0D5 440 aa16.19■□□□□ 0.18
Msh6-201ENSMUST00000005503 U2af1Q9D883 239 aaKnown RBP16.18■□□□□ 0.18
Msh6-201ENSMUST00000005503 WrnO09053 1401 aa16.17■□□□□ 0.18
Msh6-201ENSMUST00000005503 1700019A02RikA0A087WPV9 146 aa16.17■□□□□ 0.18
Msh6-201ENSMUST00000005503 Prkrip1Q9CWV6 186 aaKnown RBP16.17■□□□□ 0.18
Msh6-201ENSMUST00000005503 Rock1P70335 1354 aa16.17■□□□□ 0.18
Msh6-201ENSMUST00000005503 Plppr3Q7TPB0 716 aa16.16■□□□□ 0.18
Msh6-201ENSMUST00000005503 Ak7Q9D2H2 614 aa16.16■□□□□ 0.18
Msh6-201ENSMUST00000005503 Irx6Q9ER75 438 aa16.16■□□□□ 0.18
Msh6-201ENSMUST00000005503 Ksr2Q3UVC0 959 aa16.15■□□□□ 0.18
Msh6-201ENSMUST00000005503 Tmco5bQ80X59 307 aa16.15■□□□□ 0.18
Msh6-201ENSMUST00000005503 Mroh2bQ7M6Y6 1581 aa16.15■□□□□ 0.18
Msh6-201ENSMUST00000005503 Map7O88735 730 aa16.15■□□□□ 0.18
Msh6-201ENSMUST00000005503 Iqcf3Q9D498 203 aa16.15■□□□□ 0.18
Msh6-201ENSMUST00000005503 Rad54l2Q99NG0 1466 aa16.15■□□□□ 0.18
Msh6-201ENSMUST00000005503 NrkQ9R0G8 1455 aa16.15■□□□□ 0.18
Msh6-201ENSMUST00000005503 Phldb1Q6PDH0 1371 aaKnown RBP16.15■□□□□ 0.18
Msh6-201ENSMUST00000005503 Zscan10Q3URR7 782 aa16.14■□□□□ 0.17
Msh6-201ENSMUST00000005503 Tdrd9Q14BI7 1383 aa16.14■□□□□ 0.17
Msh6-201ENSMUST00000005503 Taok2Q6ZQ29 1240 aa16.14■□□□□ 0.17
Msh6-201ENSMUST00000005503 Liat1Q810M6 228 aa16.14■□□□□ 0.17
Msh6-201ENSMUST00000005503 Sart1Q9Z315 806 aaKnown RBP16.13■□□□□ 0.17
Msh6-201ENSMUST00000005503 Dhx9O70133 1380 aaKnown RBP16.13■□□□□ 0.17
Msh6-201ENSMUST00000005503 Plin1Q8CGN5 517 aa16.12■□□□□ 0.17
Msh6-201ENSMUST00000005503 Map3k1P53349 1493 aa16.12■□□□□ 0.17
Msh6-201ENSMUST00000005503 GorabQ8BRM2 368 aa16.11■□□□□ 0.17
Msh6-201ENSMUST00000005503 Efcab5A0JP43 1406 aa16.11■□□□□ 0.17
Msh6-201ENSMUST00000005503 Mre11Q61216 706 aa16.11■□□□□ 0.17
Msh6-201ENSMUST00000005503 Fan1Q69ZT1 1020 aa16.11■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms