RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI3	YPR189W	SHC1	P39000	512 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	ELO3	P40319	345 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	AGX1	P43567	385 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	STU2	P46675	888 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	ALT2	P52892	507 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	SPC98	P53540	846 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	BUD17	P53727	317 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	PDR16	P53860	351 aa	Known RBP	1.63	□□□□□ -2.15
SKI3	YPR189W	DUG3	P53871	357 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	RPL6A	Q02326	176 aa	Known RBP	1.63	□□□□□ -2.15
SKI3	YPR189W	UBP16	Q02863	499 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	RRP45	Q05636	305 aa	Known RBP	1.63	□□□□□ -2.15
SKI3	YPR189W	VTA1	Q06263	330 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	MED7	Q08278	222 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	RPN8	Q08723	338 aa	Known RBP	1.63	□□□□□ -2.15
SKI3	YPR189W	UAF30	Q08747	228 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	YBR255C-A	Q3E776	120 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	AUS1	Q08409	1394 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	YML003W	P0CF16	290 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	UGP1	P32861	499 aa	Known RBP	1.63	□□□□□ -2.15
SKI3	YPR189W	NIP100	P33420	868 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	MKT1	P40850	830 aa	Known RBP	1.63	□□□□□ -2.15
SKI3	YPR189W	YJL107C	P42947	387 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	BPL1	P48445	690 aa	Predicted RBP	1.63	□□□□□ -2.15
SKI3	YPR189W	YGR127W	P53275	312 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	YGR151C	P53287	111 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	SLU7	Q02775	382 aa	Known RBP	1.63	□□□□□ -2.15
SKI3	YPR189W	UFO1	Q04511	668 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	IZH3	Q07959	543 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	LEU9	Q12166	604 aa	Known RBP	1.63	□□□□□ -2.15
SKI3	YPR189W	RKI1	Q12189	258 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	PRS5	Q12265	496 aa	Known RBP	1.63	□□□□□ -2.15
SKI3	YPR189W	HER1	Q12276	1246 aa		1.63	□□□□□ -2.15
SKI3	YPR189W	GAL7	P08431	366 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	PET123	P17558	318 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	BUD14	P27637	709 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	MRPL9	P31334	269 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	WBP1	P33767	430 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	LTV1	P34078	463 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	MIC60	P36112	540 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	ARA1	P38115	344 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	SDH8	P38345	138 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	HSM3	P38348	480 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	KSP1	P38691	1029 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	YDR089W	P38966	869 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	LAS21	P40367	830 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	PMT6	P42934	759 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	CHA4	P43634	648 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	MLC1	P53141	149 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	DIP5	P53388	608 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	MRPL22	P53881	309 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	MRPL1	Q04599	285 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	ARR2	Q06597	130 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	HBT1	Q07653	1046 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	YDL177C	Q12257	170 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	MDM20	Q12387	796 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	ARO3	P14843	370 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	IMG1	P25626	169 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	CDC20	P26309	610 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	SPC110	P32380	944 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	PDB1	P32473	366 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	MRE11	P32829	692 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	YME2	P32843	850 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	SEC66	P33754	206 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	NTR2	P36118	322 aa	Predicted RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	FAD1	P38913	306 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	SEC31	P38968	1273 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	SAP1	P39955	897 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	ASG1	P40467	964 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	FHN1	P53279	174 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	IST1	P53843	298 aa	Predicted RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	BOP3	P53958	396 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	ABZ2	Q03266	374 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	GFD1	Q04839	188 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	DIS3	Q08162	1001 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	GPN2	Q08726	347 aa	Predicted RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	FRE3	Q08905	711 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	TFB5	Q3E7C1	72 aa	Predicted RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	FKS1	P38631	1876 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	LPD1	P09624	499 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	YMR085W	P0CF18	432 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	MRP13	P12686	339 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	1.62	□□□□□ -2.15	not detected
SKI3	YPR189W	ADH7	P25377	361 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	BOS1	P25385	244 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	PHO91	P27514	894 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	CRM1	P30822	1084 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	HXT3	P32466	567 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	SLM4	P38247	162 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	1.62	□□□□□ -2.15	not detected
SKI3	YPR189W	GIP4	P39732	760 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	SER3	P40054	469 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	CHS6	P40955	746 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	IMO32	P53219	342 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	ADE16	P54113	591 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	INA17	Q02888	182 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	RRN5	Q02983	363 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	YMR130W	Q04223	302 aa		1.62	□□□□□ -2.15
SKI3	YPR189W	EMI2	Q04409	500 aa	Known RBP	1.62	□□□□□ -2.15
SKI3	YPR189W	YDL176W	Q12027	708 aa		1.62	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms