RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W YPL066WQ12194 479 aa3.77□□□□□ -1.81
ROD1YOR018W ARG81P05085 880 aa3.76□□□□□ -1.81
ROD1YOR018W YAP1P19880 650 aaKnown RBP3.76□□□□□ -1.81
ROD1YOR018W EPT1P22140 391 aa3.76□□□□□ -1.81
ROD1YOR018W EMC1P25574 760 aa3.76□□□□□ -1.81
ROD1YOR018W RFA2P26754 273 aaKnown RBP3.76□□□□□ -1.81
ROD1YOR018W MF(ALPHA)2P32435 120 aa3.76□□□□□ -1.81
ROD1YOR018W RIM1P32445 135 aaKnown RBP3.76□□□□□ -1.81
ROD1YOR018W SOL2P37262 315 aa3.76□□□□□ -1.81
ROD1YOR018W FZO1P38297 855 aa3.76□□□□□ -1.81
ROD1YOR018W GDH3P39708 457 aa3.76□□□□□ -1.81
ROD1YOR018W GYP8P43570 497 aa3.76□□□□□ -1.81
ROD1YOR018W TEL2P53038 688 aa3.76□□□□□ -1.81
ROD1YOR018W SPP2Q02521 185 aa3.76□□□□□ -1.81
ROD1YOR018W YDR476CQ03362 224 aa3.76□□□□□ -1.81
ROD1YOR018W FMN1Q03778 218 aa3.76□□□□□ -1.81
ROD1YOR018W EMI1Q04406 187 aa3.76□□□□□ -1.81
ROD1YOR018W YDR109CQ04585 715 aa3.76□□□□□ -1.81
ROD1YOR018W MRL1Q06815 381 aa3.76□□□□□ -1.81
ROD1YOR018W HBT1Q07653 1046 aaKnown RBP3.76□□□□□ -1.81
ROD1YOR018W YOL087CQ99247 1116 aa3.76□□□□□ -1.81
ROD1YOR018W SAN1P22470 610 aa3.76□□□□□ -1.81
ROD1YOR018W BUB2P26448 306 aaPredicted RBP3.76□□□□□ -1.81
ROD1YOR018W CCR4P31384 837 aaKnown RBP3.76□□□□□ -1.81
ROD1YOR018W SPS19P32573 292 aaKnown RBP3.76□□□□□ -1.81
ROD1YOR018W STE14P32584 239 aa3.76□□□□□ -1.81
ROD1YOR018W GMH1P36125 273 aa3.76□□□□□ -1.81
ROD1YOR018W MAK5P38112 773 aaPredicted RBP3.76□□□□□ -1.81
ROD1YOR018W HSE1P38753 452 aa3.76□□□□□ -1.81
ROD1YOR018W IME4P41833 600 aa3.76□□□□□ -1.81
ROD1YOR018W LSB3P43603 459 aaKnown RBP3.76□□□□□ -1.81
ROD1YOR018W TYW3P53177 273 aa3.76□□□□□ -1.81
ROD1YOR018W TDA7P53882 636 aaPredicted RBP3.76□□□□□ -1.81
ROD1YOR018W IBD2P53892 351 aa3.76□□□□□ -1.81
ROD1YOR018W GTR1Q00582 310 aa3.76□□□□□ -1.81
ROD1YOR018W LGE1Q02796 332 aaKnown RBP3.76□□□□□ -1.81
ROD1YOR018W NSE1Q07913 336 aa3.76□□□□□ -1.81
ROD1YOR018W FLC1Q08967 793 aa3.76□□□□□ -1.81
ROD1YOR018W YKL018C-AQ3E7A7 99 aa3.76□□□□□ -1.81
ROD1YOR018W YOR338WQ99326 363 aa3.76□□□□□ -1.81
ROD1YOR018W HTS1P07263 546 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W DIT1P21623 536 aa3.75□□□□□ -1.81
ROD1YOR018W SPR1P32603 445 aa3.75□□□□□ -1.81
ROD1YOR018W GLY1P37303 387 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W CYC2P38909 366 aa3.75□□□□□ -1.81
ROD1YOR018W ECM1P39715 212 aa3.75□□□□□ -1.81
ROD1YOR018W MET18P40469 1032 aa3.75□□□□□ -1.81
ROD1YOR018W EFM5P53200 248 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W NNF2P53253 936 aa3.75□□□□□ -1.81
ROD1YOR018W RCF2P53721 224 aa3.75□□□□□ -1.81
ROD1YOR018W CUZ1P53899 274 aa3.75□□□□□ -1.81
ROD1YOR018W ROT1Q03691 256 aa3.75□□□□□ -1.81
ROD1YOR018W PPN1Q04119 674 aa3.75□□□□□ -1.81
ROD1YOR018W YMR111CQ04461 462 aaPredicted RBP3.75□□□□□ -1.81
ROD1YOR018W CIA1Q05583 330 aa3.75□□□□□ -1.81
ROD1YOR018W SOG2Q08817 791 aa3.75□□□□□ -1.81
ROD1YOR018W YPL245WQ12179 454 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W GPR1Q12361 961 aa3.75□□□□□ -1.81
ROD1YOR018W TY4A-HQ6Q5P6 413 aa3.75□□□□□ -1.81
ROD1YOR018W HRP1Q99383 534 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W ACC1Q00955 2233 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W YAR066WP0CX18 203 aa3.75□□□□□ -1.81
ROD1YOR018W YHR214WP0CX19 203 aa3.75□□□□□ -1.81
ROD1YOR018W EXO70P19658 623 aa3.75□□□□□ -1.81
ROD1YOR018W SSE1P32589 693 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W TFC3P34111 1160 aa3.75□□□□□ -1.81
ROD1YOR018W SQT1P35184 431 aa3.75□□□□□ -1.81
ROD1YOR018W EMC3P36039 253 aa3.75□□□□□ -1.81
ROD1YOR018W YKR078WP36158 585 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W PDX3P38075 228 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W TSC10P38342 320 aa3.75□□□□□ -1.81
ROD1YOR018W INM1P38710 295 aa3.75□□□□□ -1.81
ROD1YOR018W WSC4P38739 605 aa3.75□□□□□ -1.81
ROD1YOR018W NPT1P39683 429 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W YEL073CP39974 107 aa3.75□□□□□ -1.81
ROD1YOR018W SWC4P53201 476 aa3.75□□□□□ -1.81
ROD1YOR018W CUS2P53830 285 aaPredicted RBP3.75□□□□□ -1.81
ROD1YOR018W YNL010WP53981 241 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
ROD1YOR018W ATP25Q03153 612 aa3.75□□□□□ -1.81
ROD1YOR018W CTK1Q03957 528 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W TY1A-DR2Q03964 440 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W TY1A-MR1Q04215 440 aa3.75□□□□□ -1.81
ROD1YOR018W MEX67Q99257 599 aaKnown RBP3.75□□□□□ -1.81
ROD1YOR018W MPD2Q99316 277 aa3.75□□□□□ -1.81
ROD1YOR018W TEL1P38110 2787 aa3.74□□□□□ -1.81
ROD1YOR018W CAR1P00812 333 aaKnown RBP3.74□□□□□ -1.81
ROD1YOR018W RPL24AP04449 155 aaKnown RBP3.74□□□□□ -1.81
ROD1YOR018W RPS4AP0CX35 261 aaKnown RBP3.74□□□□□ -1.81
ROD1YOR018W RPS4BP0CX36 261 aaKnown RBP3.74□□□□□ -1.81
ROD1YOR018W YSR3P23501 404 aa3.74□□□□□ -1.81
ROD1YOR018W IDH2P28241 369 aaKnown RBP3.74□□□□□ -1.81
ROD1YOR018W MRE11P32829 692 aa3.74□□□□□ -1.81
ROD1YOR018W TIP20P33891 701 aa3.74□□□□□ -1.81
ROD1YOR018W DEF1P35732 738 aaKnown RBP3.74□□□□□ -1.81
ROD1YOR018W YBR184WP38299 523 aa3.74□□□□□ -1.81
ROD1YOR018W DBP8P38719 431 aa3.74□□□□□ -1.81
ROD1YOR018W YHR045WP38775 560 aa3.74□□□□□ -1.81
ROD1YOR018W SCS2P40075 244 aaKnown RBP3.74□□□□□ -1.81
ROD1YOR018W VRG4P40107 337 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms