RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C MNT4P53745 580 aa3.08□□□□□ -1.92
SSN8YNL025C INN1P53901 409 aa3.08□□□□□ -1.92
SSN8YNL025C REX2P54964 269 aaKnown RBP3.08□□□□□ -1.92
SSN8YNL025C SKO1Q02100 647 aa3.08□□□□□ -1.92
SSN8YNL025C ABZ2Q03266 374 aa3.08□□□□□ -1.92
SSN8YNL025C TRS31Q03337 283 aa3.08□□□□□ -1.92
SSN8YNL025C YML037CQ03703 340 aa3.08□□□□□ -1.92
SSN8YNL025C FIN1Q03898 291 aa3.08□□□□□ -1.92
SSN8YNL025C RRN11Q04712 507 aa3.08□□□□□ -1.92
SSN8YNL025C CRF1Q04930 467 aa3.08□□□□□ -1.92
SSN8YNL025C RRP45Q05636 305 aaKnown RBP3.08□□□□□ -1.92
SSN8YNL025C ECM7Q06200 448 aa3.08□□□□□ -1.92
SSN8YNL025C ATG23Q06671 453 aa3.08□□□□□ -1.92
SSN8YNL025C MCM21Q06675 368 aa3.08□□□□□ -1.92
SSN8YNL025C LOT6Q07923 191 aa3.08□□□□□ -1.92
SSN8YNL025C BUD7Q08754 746 aa3.08□□□□□ -1.92
SSN8YNL025C ICL2Q12031 575 aa3.08□□□□□ -1.92
SSN8YNL025C GLE1Q12315 538 aa3.08□□□□□ -1.92
SSN8YNL025C LDB17Q12342 491 aa3.08□□□□□ -1.92
SSN8YNL025C VCX1Q99385 411 aa3.08□□□□□ -1.92
SSN8YNL025C LAM4P38800 1345 aa3.08□□□□□ -1.92
SSN8YNL025C IKI3Q06706 1349 aaKnown RBP3.08□□□□□ -1.92
SSN8YNL025C GAL80P04387 435 aa3.07□□□□□ -1.92
SSN8YNL025C ILV5P06168 395 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C PDE2P06776 526 aa3.07□□□□□ -1.92
SSN8YNL025C ERG20P08524 352 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C LPD1P09624 499 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C HMG2P12684 1045 aa3.07□□□□□ -1.92
SSN8YNL025C ARO3P14843 370 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C UGA1P17649 471 aa3.07□□□□□ -1.92
SSN8YNL025C MDM10P18409 493 aa3.07□□□□□ -1.92
SSN8YNL025C SAR1P20606 190 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C SEC15P22224 910 aa3.07□□□□□ -1.92
SSN8YNL025C KIN82P25341 720 aa3.07□□□□□ -1.92
SSN8YNL025C GID7P25569 745 aa3.07□□□□□ -1.92
SSN8YNL025C GEX1P25596 615 aa3.07□□□□□ -1.92
SSN8YNL025C ITR1P30605 584 aa3.07□□□□□ -1.92
SSN8YNL025C MVD1P32377 396 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C ERG1P32476 496 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C EMP70P32802 667 aa3.07□□□□□ -1.92
SSN8YNL025C YBL055CP34220 418 aaPredicted RBP3.07□□□□□ -1.92
SSN8YNL025C BMH2P34730 273 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C YKL070WP36087 169 aa3.07□□□□□ -1.92
SSN8YNL025C APT2P36973 181 aa3.07□□□□□ -1.92
SSN8YNL025C YNG2P38806 282 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C SFB3P38810 929 aa3.07□□□□□ -1.92
SSN8YNL025C SEC31P38968 1273 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C PAC2P39937 518 aa3.07□□□□□ -1.92
SSN8YNL025C YER085CP40058 173 aa3.07□□□□□ -1.92
SSN8YNL025C GID8P40208 455 aa3.07□□□□□ -1.92
SSN8YNL025C FMC1P40491 155 aa3.07□□□□□ -1.92
SSN8YNL025C YRB1P41920 201 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C ELP2P42935 788 aa3.07□□□□□ -1.92
SSN8YNL025C YJL132WP47014 750 aa3.07□□□□□ -1.92
SSN8YNL025C SMC3P47037 1230 aa3.07□□□□□ -1.92
SSN8YNL025C BRO1P48582 844 aa3.07□□□□□ -1.92
SSN8YNL025C FMS1P50264 508 aa3.07□□□□□ -1.92
SSN8YNL025C MRK1P50873 501 aa3.07□□□□□ -1.92
SSN8YNL025C ATG4P53867 494 aa3.07□□□□□ -1.92
SSN8YNL025C ESBP6P53918 673 aa3.07□□□□□ -1.92
SSN8YNL025C KTR6P54070 446 aa3.07□□□□□ -1.92
SSN8YNL025C ARG5,6Q01217 863 aa3.07□□□□□ -1.92
SSN8YNL025C LEE1Q02799 301 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C RRP17Q04031 235 aaPredicted RBP3.07□□□□□ -1.92
SSN8YNL025C URC2Q04411 772 aa3.07□□□□□ -1.92
SSN8YNL025C APC4Q04601 652 aa3.07□□□□□ -1.92
SSN8YNL025C THI7Q05998 598 aa3.07□□□□□ -1.92
SSN8YNL025C CUR1Q06469 252 aa3.07□□□□□ -1.92
SSN8YNL025C ETT1Q08421 412 aaKnown RBP3.07□□□□□ -1.92
SSN8YNL025C FMP40Q08968 688 aaPredicted RBP3.07□□□□□ -1.92
SSN8YNL025C CMC2Q3E7A4 109 aa3.07□□□□□ -1.92
SSN8YNL025C YBL111CQ3E7Y5 667 aa3.07□□□□□ -1.92
SSN8YNL025C YOS9Q99220 542 aa3.07□□□□□ -1.92
SSN8YNL025C VPS63O13549 108 aa3.06□□□□□ -1.92
SSN8YNL025C RNR2P09938 399 aaKnown RBP3.06□□□□□ -1.92
SSN8YNL025C RPL3P14126 387 aaKnown RBP3.06□□□□□ -1.92
SSN8YNL025C PDA1P16387 420 aaKnown RBP3.06□□□□□ -1.92
SSN8YNL025C VMA16P23968 213 aa3.06□□□□□ -1.92
SSN8YNL025C RPS7AP26786 190 aaKnown RBP3.06□□□□□ -1.92
SSN8YNL025C PRE4P30657 266 aa3.06□□□□□ -1.92
SSN8YNL025C SSE2P32590 693 aaKnown RBP3.06□□□□□ -1.92
SSN8YNL025C RML2P32611 393 aa3.06□□□□□ -1.92
SSN8YNL025C CYM1P32898 989 aa3.06□□□□□ -1.92
SSN8YNL025C PFF1P38244 976 aa3.06□□□□□ -1.92
SSN8YNL025C TAE1P38340 232 aa3.06□□□□□ -1.92
SSN8YNL025C FMO1P38866 432 aa3.06□□□□□ -1.92
SSN8YNL025C MNL1P38888 796 aa3.06□□□□□ -1.92
SSN8YNL025C END3P39013 349 aa3.06□□□□□ -1.92
SSN8YNL025C RTR1P40084 226 aaPredicted RBP3.06□□□□□ -1.92
SSN8YNL025C ALG5P40350 334 aa3.06□□□□□ -1.92
SSN8YNL025C IDS2P46958 469 aa3.06□□□□□ -1.92
SSN8YNL025C PET130P47065 347 aa3.06□□□□□ -1.92
SSN8YNL025C COS5P47187 383 aa3.06□□□□□ -1.92
SSN8YNL025C YGL242CP53066 181 aa3.06□□□□□ -1.92
SSN8YNL025C STR3P53101 465 aaKnown RBP3.06□□□□□ -1.92
SSN8YNL025C YGL114WP53134 725 aa3.06□□□□□ -1.92
SSN8YNL025C PNC1P53184 216 aaKnown RBP3.06□□□□□ -1.92
SSN8YNL025C MTL1P53214 551 aa3.06□□□□□ -1.92
SSN8YNL025C VOA1P53262 265 aa3.06□□□□□ -1.92
SSN8YNL025C PET117Q02771 107 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms