RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W MRPL51Q06090 140 aaPredicted RBP2.54□□□□□ -2
PKR1YMR123W LSP1Q12230 341 aaKnown RBP2.54□□□□□ -2
PKR1YMR123W YBR126W-AQ8TGU7 68 aa2.54□□□□□ -2
PKR1YMR123W HSL1P34244 1518 aa2.53□□□□□ -2
PKR1YMR123W SPT6P23615 1451 aaKnown RBP2.53□□□□□ -2
PKR1YMR123W SGS1P35187 1447 aa2.53□□□□□ -2
PKR1YMR123W RAD52P06778 471 aaKnown RBP2.53□□□□□ -2
PKR1YMR123W CDC16P09798 840 aa2.53□□□□□ -2
PKR1YMR123W PMR1P13586 950 aa2.53□□□□□ -2
PKR1YMR123W PUT3P25502 979 aaPredicted RBP2.53□□□□□ -2
PKR1YMR123W POL4P25615 582 aa2.53□□□□□ -2
PKR1YMR123W YCR022CP25620 114 aa2.53□□□□□ -2
PKR1YMR123W UTR4P32626 227 aa2.53□□□□□ -2
PKR1YMR123W FRE1P32791 686 aa2.53□□□□□ -2
PKR1YMR123W TIF3P34167 436 aaKnown RBP2.53□□□□□ -2
PKR1YMR123W SHO1P40073 367 aa2.53□□□□□ -2
PKR1YMR123W LYS14P40971 790 aa2.53□□□□□ -2
PKR1YMR123W SPG5P42933 373 aa2.53□□□□□ -2
PKR1YMR123W ALK1P43633 760 aaKnown RBP2.53□□□□□ -2
PKR1YMR123W DUO1P53168 247 aaKnown RBP2.53□□□□□ -2
PKR1YMR123W IVY1Q04934 453 aa2.53□□□□□ -2
PKR1YMR123W VPS74Q06385 345 aa2.53□□□□□ -2
PKR1YMR123W YDL057WQ07379 328 aa2.53□□□□□ -2
PKR1YMR123W MRP13P12686 339 aa2.52□□□□□ -2.01
PKR1YMR123W REV1P12689 985 aa2.52□□□□□ -2.01
PKR1YMR123W EXO70P19658 623 aa2.52□□□□□ -2.01
PKR1YMR123W SAN1P22470 610 aa2.52□□□□□ -2.01
PKR1YMR123W RNA14P25298 677 aaKnown RBP2.52□□□□□ -2.01
PKR1YMR123W MCM10P32354 571 aa2.52□□□□□ -2.01
PKR1YMR123W SHP1P34223 423 aa2.52□□□□□ -2.01
PKR1YMR123W SWH1P35845 1188 aa2.52□□□□□ -2.01
PKR1YMR123W UBP11P36026 717 aa2.52□□□□□ -2.01
PKR1YMR123W DUG2P38149 878 aa2.52□□□□□ -2.01
PKR1YMR123W FLC2P39719 783 aa2.52□□□□□ -2.01
PKR1YMR123W HAT2P39984 401 aa2.52□□□□□ -2.01
PKR1YMR123W MKT1P40850 830 aaKnown RBP2.52□□□□□ -2.01
PKR1YMR123W MSO1P53604 210 aaKnown RBP2.52□□□□□ -2.01
PKR1YMR123W IRC15Q02733 499 aa2.52□□□□□ -2.01
PKR1YMR123W NGL3Q03210 505 aa2.52□□□□□ -2.01
PKR1YMR123W YEH1Q07804 573 aa2.52□□□□□ -2.01
PKR1YMR123W NMD4Q12129 218 aa2.52□□□□□ -2.01
PKR1YMR123W YCL021W-AQ96VH3 125 aa2.52□□□□□ -2.01
PKR1YMR123W HSH49Q99181 213 aaPredicted RBP2.52□□□□□ -2.01
PKR1YMR123W SEM1O94742 89 aa2.51□□□□□ -2.01
PKR1YMR123W LPD1P09624 499 aaKnown RBP2.51□□□□□ -2.01
PKR1YMR123W AFG3P39925 761 aa2.51□□□□□ -2.01
PKR1YMR123W TIF4631P39935 952 aaKnown RBP2.51□□□□□ -2.01
PKR1YMR123W YEL068CP39977 110 aa2.51□□□□□ -2.01
PKR1YMR123W SHE10P53075 577 aa2.51□□□□□ -2.01
PKR1YMR123W VID30P53076 958 aa2.51□□□□□ -2.01
PKR1YMR123W LCL3P53153 274 aa2.51□□□□□ -2.01
PKR1YMR123W TOF2Q02208 771 aa2.51□□□□□ -2.01
PKR1YMR123W COQ9Q05779 260 aa2.51□□□□□ -2.01
PKR1YMR123W THP1Q08231 455 aa2.51□□□□□ -2.01
PKR1YMR123W HNT3Q08702 217 aa2.51□□□□□ -2.01
PKR1YMR123W HUA2Q12134 243 aa2.51□□□□□ -2.01
PKR1YMR123W CTF3Q12748 733 aa2.51□□□□□ -2.01
PKR1YMR123W ELO2P25358 347 aa2.5□□□□□ -2.01
PKR1YMR123W SEF1P34228 1148 aa2.5□□□□□ -2.01
PKR1YMR123W MUD2P36084 527 aaKnown RBP2.5□□□□□ -2.01
PKR1YMR123W BNA4P38169 460 aa2.5□□□□□ -2.01
PKR1YMR123W TCM62P38228 572 aaKnown RBP2.5□□□□□ -2.01
PKR1YMR123W ALG5P40350 334 aa2.5□□□□□ -2.01
PKR1YMR123W AIM22P47051 409 aa2.5□□□□□ -2.01
PKR1YMR123W GPI1P53306 609 aa2.5□□□□□ -2.01
PKR1YMR123W IPI3P53877 555 aa2.5□□□□□ -2.01
PKR1YMR123W FIN1Q03898 291 aa2.5□□□□□ -2.01
PKR1YMR123W PHO92Q06390 306 aa2.5□□□□□ -2.01
PKR1YMR123W KEL3Q08979 651 aaPredicted RBP2.5□□□□□ -2.01
PKR1YMR123W YPT6Q99260 215 aa2.5□□□□□ -2.01
PKR1YMR123W ECM5Q03214 1411 aa2.5□□□□□ -2.01
PKR1YMR123W HSC82P15108 705 aaKnown RBP2.49□□□□□ -2.01
PKR1YMR123W GLK1P17709 500 aaKnown RBP2.49□□□□□ -2.01
PKR1YMR123W PRP2P20095 876 aaPredicted RBP2.49□□□□□ -2.01
PKR1YMR123W PAH1P32567 862 aa2.49□□□□□ -2.01
PKR1YMR123W MSN2P33748 704 aa2.49□□□□□ -2.01
PKR1YMR123W ELP2P42935 788 aa2.49□□□□□ -2.01
PKR1YMR123W GWT1P47026 490 aa2.49□□□□□ -2.01
PKR1YMR123W IMD4P50094 524 aaKnown RBP2.49□□□□□ -2.01
PKR1YMR123W WSC2P53832 503 aa2.49□□□□□ -2.01
PKR1YMR123W HEF3P53978 1044 aaKnown RBP2.49□□□□□ -2.01
PKR1YMR123W RBS1Q05672 457 aaKnown RBP2.49□□□□□ -2.01
PKR1YMR123W CFT2Q12102 859 aaPredicted RBP2.49□□□□□ -2.01
PKR1YMR123W YJR112W-AQ3E743 109 aa2.49□□□□□ -2.01
PKR1YMR123W YER078W-AQ3E7A2 54 aa2.49□□□□□ -2.01
PKR1YMR123W BUD4P47136 1447 aa2.49□□□□□ -2.01
PKR1YMR123W MDS3P53094 1487 aa2.48□□□□□ -2.01
PKR1YMR123W SEC53P07283 254 aaKnown RBP2.48□□□□□ -2.01
PKR1YMR123W EST1P17214 699 aaPredicted RBP2.48□□□□□ -2.01
PKR1YMR123W PRD1P25375 712 aa2.48□□□□□ -2.01
PKR1YMR123W PAP1P29468 568 aaKnown RBP2.48□□□□□ -2.01
PKR1YMR123W MFT1P33441 392 aaKnown RBP2.48□□□□□ -2.01
PKR1YMR123W TCD2P36101 447 aaKnown RBP2.48□□□□□ -2.01
PKR1YMR123W NOP4P37838 685 aaKnown RBP2.48□□□□□ -2.01
PKR1YMR123W MUM2P38236 366 aa2.48□□□□□ -2.01
PKR1YMR123W MSR1P38714 643 aa2.48□□□□□ -2.01
PKR1YMR123W NOP16P40007 231 aaKnown RBP2.48□□□□□ -2.01
PKR1YMR123W BRR1Q99177 341 aaPredicted RBP2.48□□□□□ -2.01
PKR1YMR123W LDB16P25587 256 aa2.47□□□□□ -2.01
PKR1YMR123W FUN19P28003 413 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms