RNA–Protein interactions for RNA: YMR044W

IOC4, Transcript of Member of a complex (Isw1b) with Isw1p and Ioc2p, yeast

Gene IOC4, Length 1,428 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC4	YMR044W	YNL143C	P53908	130 aa		4.27	□□□□□ -1.73
IOC4	YMR044W	TOF2	Q02208	771 aa		4.27	□□□□□ -1.73
IOC4	YMR044W	VTC3	Q02725	835 aa		4.27	□□□□□ -1.73
IOC4	YMR044W	TAP42	Q04372	366 aa		4.27	□□□□□ -1.73
IOC4	YMR044W	YFH1	Q07540	174 aa		4.27	□□□□□ -1.73
IOC4	YMR044W	MRH1	Q12117	320 aa	Predicted RBP	4.27	□□□□□ -1.73
IOC4	YMR044W	YIL002W-A	Q3E7Z5	69 aa		4.27	□□□□□ -1.73
IOC4	YMR044W	PET111	P08468	800 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	DBP3	P20447	523 aa	Known RBP	4.26	□□□□□ -1.73
IOC4	YMR044W	PTC6	P25646	442 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	GAC1	P28006	793 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	FAA1	P30624	700 aa	Known RBP	4.26	□□□□□ -1.73
IOC4	YMR044W	SPC110	P32380	944 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	IME2	P32581	645 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	YMC2	P38087	329 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	ZTA1	P38230	334 aa	Known RBP	4.26	□□□□□ -1.73
IOC4	YMR044W	TSC10	P38342	320 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	IMD2	P38697	523 aa	Known RBP	4.26	□□□□□ -1.73
IOC4	YMR044W	RIX1	P38883	763 aa	Predicted RBP	4.26	□□□□□ -1.73
IOC4	YMR044W	FAD1	P38913	306 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	CIN4	P39110	191 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	SEC27	P41811	889 aa	Known RBP	4.26	□□□□□ -1.73
IOC4	YMR044W	ERG26	P53199	349 aa	Known RBP	4.26	□□□□□ -1.73
IOC4	YMR044W	COQ6	P53318	479 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	WAR1	Q03631	944 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	ARO10	Q06408	635 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	ETT1	Q08421	412 aa	Known RBP	4.26	□□□□□ -1.73
IOC4	YMR044W	PCL8	Q08966	492 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	AHA1	Q12449	350 aa	Known RBP	4.26	□□□□□ -1.73
IOC4	YMR044W	ZPS1	Q12512	249 aa		4.26	□□□□□ -1.73
IOC4	YMR044W	UBA1	P22515	1024 aa	Known RBP	4.25	□□□□□ -1.73
IOC4	YMR044W	MCM4	P30665	933 aa	Known RBP	4.25	□□□□□ -1.73
IOC4	YMR044W	NDI1	P32340	513 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	DBP8	P38719	431 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	MLH1	P38920	769 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	UBP5	P39944	805 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	AIP1	P46680	615 aa	Known RBP	4.25	□□□□□ -1.73
IOC4	YMR044W	RPA34	P47006	233 aa	Predicted RBP	4.25	□□□□□ -1.73
IOC4	YMR044W	RMD9	P53140	646 aa	Known RBP	4.25	□□□□□ -1.73
IOC4	YMR044W	SUN4	P53616	420 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	PRM1	P53835	661 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	EGD1	Q02642	157 aa	Known RBP	4.25	□□□□□ -1.73
IOC4	YMR044W	RRN5	Q02983	363 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	ABZ2	Q03266	374 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	EMI2	Q04409	500 aa	Known RBP	4.25	□□□□□ -1.73
IOC4	YMR044W	MRPL1	Q04599	285 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	RNH1	Q04740	348 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	COQ9	Q05779	260 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	DCS1	Q06151	350 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	ECM30	Q06673	1274 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	LEA1	Q08963	238 aa	Predicted RBP	4.25	□□□□□ -1.73
IOC4	YMR044W	MDM20	Q12387	796 aa	Known RBP	4.25	□□□□□ -1.73
IOC4	YMR044W	MTR10	Q99189	972 aa		4.25	□□□□□ -1.73
IOC4	YMR044W	HOM2	P13663	365 aa	Known RBP	4.24	□□□□□ -1.73
IOC4	YMR044W	ARO3	P14843	370 aa	Known RBP	4.24	□□□□□ -1.73
IOC4	YMR044W	PUT4	P15380	627 aa		4.24	□□□□□ -1.73
IOC4	YMR044W	RIM1	P32445	135 aa	Known RBP	4.24	□□□□□ -1.73
IOC4	YMR044W	HIR2	P32480	875 aa		4.24	□□□□□ -1.73
IOC4	YMR044W	TRM2	P33753	639 aa		4.24	□□□□□ -1.73
IOC4	YMR044W	BDH2	P39713	417 aa		4.24	□□□□□ -1.73
IOC4	YMR044W	OPT1	P40897	799 aa		4.24	□□□□□ -1.73
IOC4	YMR044W	ECM27	P47144	725 aa		4.24	□□□□□ -1.73
IOC4	YMR044W	RPN14	P53196	417 aa		4.24	□□□□□ -1.73
IOC4	YMR044W	RRP46	P53256	223 aa	Predicted RBP	4.24	□□□□□ -1.73
IOC4	YMR044W	COP1	P53622	1201 aa	Known RBP	4.24	□□□□□ -1.73
IOC4	YMR044W	YMR160W	Q03823	816 aa		4.24	□□□□□ -1.73
IOC4	YMR044W	DIS3	Q08162	1001 aa	Known RBP	4.24	□□□□□ -1.73
IOC4	YMR044W	YOL159C	Q08300	171 aa		4.24	□□□□□ -1.73
IOC4	YMR044W	APL5	Q08951	932 aa	Known RBP	4.24	□□□□□ -1.73
IOC4	YMR044W	VAM3	Q12241	283 aa		4.24	□□□□□ -1.73
IOC4	YMR044W	GPH1	P06738	902 aa	Known RBP	4.23	□□□□□ -1.73
IOC4	YMR044W	RHO2	P06781	192 aa		4.23	□□□□□ -1.73
IOC4	YMR044W	CBP1	P07252	654 aa		4.23	□□□□□ -1.73
IOC4	YMR044W	ELO2	P25358	347 aa		4.23	□□□□□ -1.73
IOC4	YMR044W	PXL1	P36166	706 aa		4.23	□□□□□ -1.73
IOC4	YMR044W	SPT8	P38915	602 aa		4.23	□□□□□ -1.73
IOC4	YMR044W	SMC2	P38989	1170 aa	Known RBP	4.23	□□□□□ -1.73
IOC4	YMR044W	VHS2	P40463	436 aa		4.23	□□□□□ -1.73
IOC4	YMR044W	ATG27	P46989	271 aa		4.23	□□□□□ -1.73
IOC4	YMR044W	EFM3	P47163	339 aa		4.23	□□□□□ -1.73
IOC4	YMR044W	STB4	P50104	949 aa		4.23	□□□□□ -1.73
IOC4	YMR044W	YGL117W	P53133	265 aa		4.23	□□□□□ -1.73
IOC4	YMR044W	YGL108C	P53139	140 aa		4.23	□□□□□ -1.73
IOC4	YMR044W	RTT109	Q07794	436 aa		4.23	□□□□□ -1.73
IOC4	YMR044W	CAR1	P00812	333 aa	Known RBP	4.22	□□□□□ -1.73
IOC4	YMR044W	ILV5	P06168	395 aa	Known RBP	4.22	□□□□□ -1.73
IOC4	YMR044W	STE3	P06783	470 aa		4.22	□□□□□ -1.73
IOC4	YMR044W	MRP2	P10663	115 aa	Predicted RBP	4.22	□□□□□ -1.73
IOC4	YMR044W	PRP2	P20095	876 aa	Predicted RBP	4.22	□□□□□ -1.73
IOC4	YMR044W	ANS1	P38832	159 aa		4.22	□□□□□ -1.73
IOC4	YMR044W	MBB1	P39534	108 aa		4.22	□□□□□ -1.73
IOC4	YMR044W	ELP2	P42935	788 aa		4.22	□□□□□ -1.73
IOC4	YMR044W	TOM22	P49334	152 aa		4.22	□□□□□ -1.73
IOC4	YMR044W	YIP5	P53108	310 aa		4.22	□□□□□ -1.73
IOC4	YMR044W	YMR178W	Q03219	274 aa	Known RBP	4.22	□□□□□ -1.73
IOC4	YMR044W	RRB1	Q04225	511 aa	Known RBP	4.22	□□□□□ -1.73
IOC4	YMR044W	YLR413W	Q06689	675 aa		4.22	□□□□□ -1.73
IOC4	YMR044W	ACF2	Q12168	779 aa		4.22	□□□□□ -1.73
IOC4	YMR044W	CBP2	P03874	630 aa	Predicted RBP	4.21	□□□□□ -1.73
IOC4	YMR044W	YMR085W	P0CF18	432 aa		4.21	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms