RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	DBR1	P24309	405 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	ARO4	P32449	370 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	SUV3	P32580	737 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	SLC1	P33333	303 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	EDS1	P38073	919 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	POA1	P38218	177 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	SPP381	P38282	291 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	QNS1	P38795	714 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	UBA4	P38820	440 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	YER010C	P40011	234 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	RPN3	P40016	523 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	PIC2	P40035	300 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	MGS1	P40151	587 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	LRO1	P40345	661 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	EFM4	P40516	257 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	PTK2	P47116	818 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	YJR111C	P47148	283 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	NAS6	P50086	228 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	ARI1	P53111	347 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	HAP5	Q02516	242 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	MRP51	Q02950	344 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	YDR239C	Q03780	787 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	CDA2	Q06703	312 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	LUC7	Q07508	261 aa	Predicted RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	YDL129W	Q07555	291 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	SPE3	Q12074	293 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	ATG9	Q12142	997 aa		4.94	□□□□□ -1.62
SEC39	YLR440C	PAA1	Q12447	191 aa	Known RBP	4.94	□□□□□ -1.62
SEC39	YLR440C	ATP6	P00854	259 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	CHO2	P05374	869 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	SEC18	P18759	758 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	SIR1	P21691	654 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	URE2	P23202	354 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	RBK1	P25332	333 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	GSP1	P32835	219 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	GSP2	P32836	220 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	YBR184W	P38299	523 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	MCX1	P38323	520 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	URA8	P38627	578 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	VMA13	P41807	478 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	PAC10	P48363	199 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	MRX6	P48564	524 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	DUO1	P53168	247 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	DAM1	P53267	343 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	TNA1	P53322	534 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	COS6	P53344	381 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	CUS2	P53830	285 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	ISU1	Q03020	165 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	SSY1	Q03770	852 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	CSC1	Q06538	782 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	MFG1	Q07684	458 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	RFU1	Q08003	200 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	SGT1	Q08446	395 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	UAF30	Q08747	228 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	FRE5	Q08908	694 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	YDR262W	Q12331	272 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	CMR1	Q12510	522 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	PNO1	Q99216	274 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	DST1	P07273	309 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	SNF6	P18888	332 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	GAP1	P19145	602 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	OLE1	P21147	510 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	CHL1	P22516	861 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	IFM1	P25038	676 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	SNT1	P25357	1226 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	SGF29	P25554	259 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	IRE1	P32361	1115 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	MSS1	P32559	526 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	RCN1	P36054	211 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	ANR2	P36090	516 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	SCO2	P38072	301 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	YNG2	P38806	282 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	DLD3	P39976	496 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	RGI1	P40043	161 aa	Predicted RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	CHS6	P40955	746 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	HXT14	P42833	540 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	IRC7	P43623	340 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	SIP4	P46954	829 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	YGL159W	P53110	370 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	PKP2	P53170	491 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	DRN1	P53255	507 aa	Known RBP	4.93	□□□□□ -1.62
SEC39	YLR440C	SHY1	P53266	389 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	ORC3	P54790	616 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	AIM41	Q12032	185 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	AGC1	Q12482	902 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	WIP1	Q2V2P8	89 aa		4.93	□□□□□ -1.62
SEC39	YLR440C	MET2	P08465	486 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	NHP6A	P11632	93 aa	Known RBP	4.92	□□□□□ -1.62
SEC39	YLR440C	BUD5	P25300	642 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC39	YLR440C	TRK2	P28584	889 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
SEC39	YLR440C	PRE4	P30657	266 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	CCR4	P31384	837 aa	Known RBP	4.92	□□□□□ -1.62
SEC39	YLR440C	GCD7	P32502	381 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC39	YLR440C	SNU114	P36048	1008 aa	Known RBP	4.92	□□□□□ -1.62
SEC39	YLR440C	ECM31	P38122	312 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	TSC10	P38342	320 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	MUP3	P38734	546 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	YHR045W	P38775	560 aa		4.92	□□□□□ -1.62
SEC39	YLR440C	SPC97	P38863	823 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms