RNA–Protein interactions for RNA: YLR193C

UPS1, Transcript of Phosphatidic acid transfer protein, yeastyeast

Gene UPS1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPS1YLR193C YCL021W-AQ96VH3 125 aa1.75□□□□□ -2.13
UPS1YLR193C SUP35P05453 685 aaKnown RBP1.74□□□□□ -2.13
UPS1YLR193C PEP4P07267 405 aaKnown RBP1.74□□□□□ -2.13
UPS1YLR193C PUT3P25502 979 aaPredicted RBP1.74□□□□□ -2.13
UPS1YLR193C YCR022CP25620 114 aa1.74□□□□□ -2.13
UPS1YLR193C YBL029WP38201 376 aa1.74□□□□□ -2.13
UPS1YLR193C HAT2P39984 401 aa1.74□□□□□ -2.13
UPS1YLR193C DPH1P40487 425 aaKnown RBP1.74□□□□□ -2.13
UPS1YLR193C ELP2P42935 788 aa1.74□□□□□ -2.13
UPS1YLR193C ALK1P43633 760 aaKnown RBP1.74□□□□□ -2.13
UPS1YLR193C YSA1Q01976 231 aa1.74□□□□□ -2.13
UPS1YLR193C IVY1Q04934 453 aa1.74□□□□□ -2.13
UPS1YLR193C YDL057WQ07379 328 aa1.74□□□□□ -2.13
UPS1YLR193C SSP2Q08646 371 aa1.74□□□□□ -2.13
UPS1YLR193C CTF3Q12748 733 aa1.74□□□□□ -2.13
UPS1YLR193C RRP12Q12754 1228 aaKnown RBP1.74□□□□□ -2.13
UPS1YLR193C RAD52P06778 471 aaKnown RBP1.73□□□□□ -2.13
UPS1YLR193C SPT15P13393 240 aaKnown RBP1.73□□□□□ -2.13
UPS1YLR193C KAR3P17119 729 aa1.73□□□□□ -2.13
UPS1YLR193C ART10P18634 518 aaKnown RBP1.73□□□□□ -2.13
UPS1YLR193C RNA14P25298 677 aaKnown RBP1.73□□□□□ -2.13
UPS1YLR193C DPB3P27344 201 aa1.73□□□□□ -2.13
UPS1YLR193C CHS3P29465 1165 aa1.73□□□□□ -2.13
UPS1YLR193C FRE1P32791 686 aa1.73□□□□□ -2.13
UPS1YLR193C SHP1P34223 423 aa1.73□□□□□ -2.13
UPS1YLR193C DUG2P38149 878 aa1.73□□□□□ -2.13
UPS1YLR193C DRN1P53255 507 aaKnown RBP1.73□□□□□ -2.13
UPS1YLR193C GPI1P53306 609 aa1.73□□□□□ -2.13
UPS1YLR193C TOF2Q02208 771 aa1.73□□□□□ -2.13
UPS1YLR193C YML037CQ03703 340 aa1.73□□□□□ -2.13
UPS1YLR193C YKU80Q04437 629 aa1.73□□□□□ -2.13
UPS1YLR193C RRN11Q04712 507 aa1.73□□□□□ -2.13
UPS1YLR193C PAL1Q05518 499 aaKnown RBP1.73□□□□□ -2.13
UPS1YLR193C SPE4Q12455 300 aa1.73□□□□□ -2.13
UPS1YLR193C NOP58Q12499 511 aaKnown RBP1.73□□□□□ -2.13
UPS1YLR193C BRR1Q99177 341 aaPredicted RBP1.73□□□□□ -2.13
UPS1YLR193C YCK1P23291 538 aa1.72□□□□□ -2.13
UPS1YLR193C LSB5P25369 354 aa1.72□□□□□ -2.13
UPS1YLR193C FUN19P28003 413 aaPredicted RBP1.72□□□□□ -2.13
UPS1YLR193C MFT1P33441 392 aaKnown RBP1.72□□□□□ -2.13
UPS1YLR193C PAD1P33751 242 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
UPS1YLR193C UBP11P36026 717 aa1.72□□□□□ -2.13
UPS1YLR193C FUI1P38196 639 aa1.72□□□□□ -2.13
UPS1YLR193C TCM62P38228 572 aaKnown RBP1.72□□□□□ -2.13
UPS1YLR193C CCT6P39079 546 aa1.72□□□□□ -2.13
UPS1YLR193C PRE5P40302 234 aaKnown RBP1.72□□□□□ -2.13
UPS1YLR193C GWT1P47026 490 aa1.72□□□□□ -2.13
UPS1YLR193C VID30P53076 958 aa1.72□□□□□ -2.13
UPS1YLR193C RBG2P53295 368 aaKnown RBP1.72□□□□□ -2.13
UPS1YLR193C WSC2P53832 503 aa1.72□□□□□ -2.13
UPS1YLR193C YMR018WQ04364 514 aa1.72□□□□□ -2.13
UPS1YLR193C RBS1Q05672 457 aaKnown RBP1.72□□□□□ -2.13
UPS1YLR193C PHO92Q06390 306 aa1.72□□□□□ -2.13
UPS1YLR193C THP1Q08231 455 aa1.72□□□□□ -2.13
UPS1YLR193C NMD4Q12129 218 aa1.72□□□□□ -2.13
UPS1YLR193C YER078W-AQ3E7A2 54 aa1.72□□□□□ -2.13
UPS1YLR193C YBR126W-AQ8TGU7 68 aa1.72□□□□□ -2.13
UPS1YLR193C HSH49Q99181 213 aaPredicted RBP1.72□□□□□ -2.13
UPS1YLR193C CDC16P09798 840 aa1.71□□□□□ -2.14
UPS1YLR193C CPR1P14832 162 aaKnown RBP1.71□□□□□ -2.14
UPS1YLR193C HSC82P15108 705 aaKnown RBP1.71□□□□□ -2.14
UPS1YLR193C PRP2P20095 876 aaPredicted RBP1.71□□□□□ -2.14
UPS1YLR193C POL4P25615 582 aa1.71□□□□□ -2.14
UPS1YLR193C PAP1P29468 568 aaKnown RBP1.71□□□□□ -2.14
UPS1YLR193C DEG1P31115 442 aaKnown RBP1.71□□□□□ -2.14
UPS1YLR193C YEL045CP32616 141 aa1.71□□□□□ -2.14
UPS1YLR193C YME1P32795 747 aa1.71□□□□□ -2.14
UPS1YLR193C BNA4P38169 460 aa1.71□□□□□ -2.14
UPS1YLR193C FLC2P39719 783 aa1.71□□□□□ -2.14
UPS1YLR193C AFG3P39925 761 aa1.71□□□□□ -2.14
UPS1YLR193C TIF4631P39935 952 aaKnown RBP1.71□□□□□ -2.14
UPS1YLR193C ALG5P40350 334 aa1.71□□□□□ -2.14
UPS1YLR193C YGR210CP42942 411 aa1.71□□□□□ -2.14
UPS1YLR193C SDT1P53078 280 aa1.71□□□□□ -2.14
UPS1YLR193C YGL039WP53183 348 aaKnown RBP1.71□□□□□ -2.14
UPS1YLR193C CAF40P53829 373 aa1.71□□□□□ -2.14
UPS1YLR193C FIN1Q03898 291 aa1.71□□□□□ -2.14
UPS1YLR193C YEH1Q07804 573 aa1.71□□□□□ -2.14
UPS1YLR193C HUA2Q12134 243 aa1.71□□□□□ -2.14
UPS1YLR193C ERV2Q12284 196 aa1.71□□□□□ -2.14
UPS1YLR193C HHF1P02309 103 aaKnown RBP1.7□□□□□ -2.14
UPS1YLR193C HIP1P06775 603 aa1.7□□□□□ -2.14
UPS1YLR193C MRP13P12686 339 aa1.7□□□□□ -2.14
UPS1YLR193C HEM15P16622 393 aa1.7□□□□□ -2.14
UPS1YLR193C GLK1P17709 500 aaKnown RBP1.7□□□□□ -2.14
UPS1YLR193C ARO2P28777 376 aaKnown RBP1.7□□□□□ -2.14
UPS1YLR193C CRM1P30822 1084 aaKnown RBP1.7□□□□□ -2.14
UPS1YLR193C SSH4P32343 579 aa1.7□□□□□ -2.14
UPS1YLR193C MRP4P32902 394 aa1.7□□□□□ -2.14
UPS1YLR193C MSN2P33748 704 aa1.7□□□□□ -2.14
UPS1YLR193C YBL059WP34224 193 aa1.7□□□□□ -2.14
UPS1YLR193C SEF1P34228 1148 aa1.7□□□□□ -2.14
UPS1YLR193C SGS1P35187 1447 aa1.7□□□□□ -2.14
UPS1YLR193C NOP4P37838 685 aaKnown RBP1.7□□□□□ -2.14
UPS1YLR193C SRO77P38163 1010 aa1.7□□□□□ -2.14
UPS1YLR193C MSR1P38714 643 aa1.7□□□□□ -2.14
UPS1YLR193C URB2P47108 1174 aa1.7□□□□□ -2.14
UPS1YLR193C MEP3P53390 489 aa1.7□□□□□ -2.14
UPS1YLR193C OGG1P53397 376 aaPredicted RBP1.7□□□□□ -2.14
UPS1YLR193C HEF3P53978 1044 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms