RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C THP1Q08231 455 aa3.29□□□□□ -1.88
YPT52YKR014C RCN2Q12044 265 aa3.29□□□□□ -1.88
YPT52YKR014C SEM1O94742 89 aa3.28□□□□□ -1.88
YPT52YKR014C MRP13P12686 339 aa3.28□□□□□ -1.88
YPT52YKR014C ATR1P13090 542 aa3.28□□□□□ -1.88
YPT52YKR014C PEP3P27801 918 aa3.28□□□□□ -1.88
YPT52YKR014C PAH1P32567 862 aa3.28□□□□□ -1.88
YPT52YKR014C UTR4P32626 227 aa3.28□□□□□ -1.88
YPT52YKR014C LOS1P33418 1100 aaPredicted RBP3.28□□□□□ -1.88
YPT52YKR014C TUL1P36096 758 aa3.28□□□□□ -1.88
YPT52YKR014C NOP16P40007 231 aaKnown RBP3.28□□□□□ -1.88
YPT52YKR014C VID27P40157 782 aa3.28□□□□□ -1.88
YPT52YKR014C YGR066CP53242 292 aa3.28□□□□□ -1.88
YPT52YKR014C RLI1Q03195 608 aaKnown RBP3.28□□□□□ -1.88
YPT52YKR014C SLD5Q03406 294 aa3.28□□□□□ -1.88
YPT52YKR014C YKU80Q04437 629 aa3.28□□□□□ -1.88
YPT52YKR014C YOR365CQ08844 703 aa3.28□□□□□ -1.88
YPT52YKR014C RSA1Q08932 381 aa3.28□□□□□ -1.88
YPT52YKR014C NCE102Q12207 173 aaRIP-Chip data3.28□□□□□ -1.88not detected
YPT52YKR014C AYT1Q12226 474 aa3.28□□□□□ -1.88
YPT52YKR014C YPT6Q99260 215 aa3.28□□□□□ -1.88
YPT52YKR014C RAD52P06778 471 aaKnown RBP3.27□□□□□ -1.89
YPT52YKR014C AMD1P15274 810 aaKnown RBP3.27□□□□□ -1.89
YPT52YKR014C GFD2P25370 566 aaKnown RBP3.27□□□□□ -1.89
YPT52YKR014C ATS1P31386 333 aa3.27□□□□□ -1.89
YPT52YKR014C AGA1P32323 725 aa3.27□□□□□ -1.89
YPT52YKR014C PMU1P36069 295 aa3.27□□□□□ -1.89
YPT52YKR014C BNA4P38169 460 aa3.27□□□□□ -1.89
YPT52YKR014C REG2P38232 338 aa3.27□□□□□ -1.89
YPT52YKR014C MSR1P38714 643 aa3.27□□□□□ -1.89
YPT52YKR014C ALG8P40351 577 aa3.27□□□□□ -1.89
YPT52YKR014C NGL3Q03210 505 aa3.27□□□□□ -1.89
YPT52YKR014C BNA5Q05979 453 aa3.27□□□□□ -1.89
YPT52YKR014C YJR112W-AQ3E743 109 aa3.27□□□□□ -1.89
YPT52YKR014C PEP4P07267 405 aaKnown RBP3.26□□□□□ -1.89
YPT52YKR014C NOP1P15646 327 aaKnown RBP3.26□□□□□ -1.89
YPT52YKR014C FRE1P32791 686 aa3.26□□□□□ -1.89
YPT52YKR014C YME1P32795 747 aa3.26□□□□□ -1.89
YPT52YKR014C TIF3P34167 436 aaKnown RBP3.26□□□□□ -1.89
YPT52YKR014C DUG2P38149 878 aa3.26□□□□□ -1.89
YPT52YKR014C IDP2P41939 412 aa3.26□□□□□ -1.89
YPT52YKR014C IMD4P50094 524 aaKnown RBP3.26□□□□□ -1.89
YPT52YKR014C YGL242CP53066 181 aa3.26□□□□□ -1.89
YPT52YKR014C GPI1P53306 609 aa3.26□□□□□ -1.89
YPT52YKR014C BOR1P53838 576 aa3.26□□□□□ -1.89
YPT52YKR014C FIN1Q03898 291 aa3.26□□□□□ -1.89
YPT52YKR014C VPS38Q05919 439 aa3.26□□□□□ -1.89
YPT52YKR014C AVL9Q12500 764 aa3.26□□□□□ -1.89
YPT52YKR014C LPD1P09624 499 aaKnown RBP3.25□□□□□ -1.89
YPT52YKR014C HSC82P15108 705 aaKnown RBP3.25□□□□□ -1.89
YPT52YKR014C SGV1P23293 657 aaKnown RBP3.25□□□□□ -1.89
YPT52YKR014C TCD2P36101 447 aaKnown RBP3.25□□□□□ -1.89
YPT52YKR014C TCM62P38228 572 aaKnown RBP3.25□□□□□ -1.89
YPT52YKR014C SDS24P38314 527 aa3.25□□□□□ -1.89
YPT52YKR014C CCT6P39079 546 aa3.25□□□□□ -1.89
YPT52YKR014C PHO92Q06390 306 aa3.25□□□□□ -1.89
YPT52YKR014C CTI6Q08923 506 aa3.25□□□□□ -1.89
YPT52YKR014C YDR056CQ12025 205 aa3.25□□□□□ -1.89
YPT52YKR014C YLL056CQ12177 298 aa3.25□□□□□ -1.89
YPT52YKR014C SUC2P00724 532 aa3.24□□□□□ -1.89
YPT52YKR014C SWE1P32944 819 aa3.24□□□□□ -1.89
YPT52YKR014C RSM22P36056 628 aa3.24□□□□□ -1.89
YPT52YKR014C AVT5P38176 459 aa3.24□□□□□ -1.89
YPT52YKR014C TIF4631P39935 952 aaKnown RBP3.24□□□□□ -1.89
YPT52YKR014C RMD8P43620 662 aa3.24□□□□□ -1.89
YPT52YKR014C ZPR1P53303 486 aaKnown RBP3.24□□□□□ -1.89
YPT52YKR014C COQ9Q05779 260 aa3.24□□□□□ -1.89
YPT52YKR014C BUD21Q08492 214 aaPredicted RBP3.24□□□□□ -1.89
YPT52YKR014C HEM2P05373 342 aa3.23□□□□□ -1.89
YPT52YKR014C DFR1P07807 211 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
YPT52YKR014C CBS1P14066 229 aa3.23□□□□□ -1.89
YPT52YKR014C AAC3P18238 307 aa3.23□□□□□ -1.89
YPT52YKR014C PRP2P20095 876 aaPredicted RBP3.23□□□□□ -1.89
YPT52YKR014C SAN1P22470 610 aa3.23□□□□□ -1.89
YPT52YKR014C YOX1P34161 385 aa3.23□□□□□ -1.89
YPT52YKR014C YPI1P43587 155 aa3.23□□□□□ -1.89
YPT52YKR014C HEF3P53978 1044 aaKnown RBP3.23□□□□□ -1.89
YPT52YKR014C RBS1Q05672 457 aaKnown RBP3.23□□□□□ -1.89
YPT52YKR014C TLG2Q08144 397 aa3.23□□□□□ -1.89
YPT52YKR014C RLM1Q12224 676 aa3.23□□□□□ -1.89
YPT52YKR014C GCN4P03069 281 aa3.22□□□□□ -1.89
YPT52YKR014C GAL80P04387 435 aa3.22□□□□□ -1.89
YPT52YKR014C GLK1P17709 500 aaKnown RBP3.22□□□□□ -1.89
YPT52YKR014C PUT3P25502 979 aaPredicted RBP3.22□□□□□ -1.89
YPT52YKR014C YCR022CP25620 114 aa3.22□□□□□ -1.89
YPT52YKR014C MSN2P33748 704 aa3.22□□□□□ -1.89
YPT52YKR014C CBP4P37267 147 aa3.22□□□□□ -1.89
YPT52YKR014C HAT2P39984 401 aa3.22□□□□□ -1.89
YPT52YKR014C URB2P47108 1174 aa3.22□□□□□ -1.89
YPT52YKR014C MRX6P48564 524 aa3.22□□□□□ -1.89
YPT52YKR014C DRN1P53255 507 aaKnown RBP3.22□□□□□ -1.89
YPT52YKR014C HNT3Q08702 217 aa3.22□□□□□ -1.89
YPT52YKR014C FOB1O13329 566 aa3.21□□□□□ -1.9
YPT52YKR014C PCA1P38360 1216 aa3.21□□□□□ -1.9
YPT52YKR014C TIF5P38431 405 aaKnown RBP3.21□□□□□ -1.9
YPT52YKR014C MBB1P39534 108 aa3.21□□□□□ -1.9
YPT52YKR014C ERP2P39704 215 aa3.21□□□□□ -1.9
YPT52YKR014C POP1P41812 875 aa3.21□□□□□ -1.9
YPT52YKR014C GWT1P47026 490 aa3.21□□□□□ -1.9
YPT52YKR014C MSO1P53604 210 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms