RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C NPR2P39923 615 aa3.47□□□□□ -1.85
CTK2YJL006C ALG5P40350 334 aa3.47□□□□□ -1.85
CTK2YJL006C SNG1P46950 547 aa3.47□□□□□ -1.85
CTK2YJL006C YGR066CP53242 292 aa3.47□□□□□ -1.85
CTK2YJL006C YGR126WP53274 230 aa3.47□□□□□ -1.85
CTK2YJL006C RBG2P53295 368 aaKnown RBP3.47□□□□□ -1.85
CTK2YJL006C ARE2P53629 642 aaKnown RBP3.47□□□□□ -1.85
CTK2YJL006C VPS75P53853 264 aa3.47□□□□□ -1.85
CTK2YJL006C DUG3P53871 357 aa3.47□□□□□ -1.85
CTK2YJL006C IPI3P53877 555 aa3.47□□□□□ -1.85
CTK2YJL006C SAM50P53969 484 aa3.47□□□□□ -1.85
CTK2YJL006C RHO4Q00246 291 aa3.47□□□□□ -1.85
CTK2YJL006C RPC11Q04307 110 aaPredicted RBP3.47□□□□□ -1.85
CTK2YJL006C SDH5Q08230 162 aa3.47□□□□□ -1.85
CTK2YJL006C DNA2P38859 1522 aa3.46□□□□□ -1.86
CTK2YJL006C CBS1P14066 229 aa3.46□□□□□ -1.86
CTK2YJL006C HSC82P15108 705 aaKnown RBP3.46□□□□□ -1.86
CTK2YJL006C TYR1P20049 452 aa3.46□□□□□ -1.86
CTK2YJL006C YKL023WP36103 277 aaKnown RBP3.46□□□□□ -1.86
CTK2YJL006C REG2P38232 338 aa3.46□□□□□ -1.86
CTK2YJL006C SGN1P40561 250 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
CTK2YJL006C RTT101P47050 842 aa3.46□□□□□ -1.86
CTK2YJL006C YPL014WQ02606 381 aa3.46□□□□□ -1.86
CTK2YJL006C SHR3Q02774 210 aa3.46□□□□□ -1.86
CTK2YJL006C RBA50Q04418 439 aa3.46□□□□□ -1.86
CTK2YJL006C VPS38Q05919 439 aa3.46□□□□□ -1.86
CTK2YJL006C THI20Q08224 551 aa3.46□□□□□ -1.86
CTK2YJL006C AVL9Q12500 764 aa3.46□□□□□ -1.86
CTK2YJL006C SUI2P20459 304 aaKnown RBP3.45□□□□□ -1.86
CTK2YJL006C TCD2P36101 447 aaKnown RBP3.45□□□□□ -1.86
CTK2YJL006C YHR210CP38893 341 aa3.45□□□□□ -1.86
CTK2YJL006C YTA12P40341 825 aa3.45□□□□□ -1.86
CTK2YJL006C RPR2P40571 144 aa3.45□□□□□ -1.86
CTK2YJL006C IMD4P50094 524 aaKnown RBP3.45□□□□□ -1.86
CTK2YJL006C YGL082WP53155 381 aa3.45□□□□□ -1.86
CTK2YJL006C ERP1Q05359 219 aaKnown RBP3.45□□□□□ -1.86
CTK2YJL006C GLO2Q05584 274 aa3.45□□□□□ -1.86
CTK2YJL006C YDL057WQ07379 328 aa3.45□□□□□ -1.86
CTK2YJL006C YOR365CQ08844 703 aa3.45□□□□□ -1.86
CTK2YJL006C SGS1P35187 1447 aa3.44□□□□□ -1.86
CTK2YJL006C GAL80P04387 435 aa3.44□□□□□ -1.86
CTK2YJL006C PEP4P07267 405 aaKnown RBP3.44□□□□□ -1.86
CTK2YJL006C DFR1P07807 211 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
CTK2YJL006C SGV1P23293 657 aaKnown RBP3.44□□□□□ -1.86
CTK2YJL006C ELO2P25358 347 aa3.44□□□□□ -1.86
CTK2YJL006C VPS17P32913 551 aa3.44□□□□□ -1.86
CTK2YJL006C MSR1P38714 643 aa3.44□□□□□ -1.86
CTK2YJL006C CSM2P40465 213 aa3.44□□□□□ -1.86
CTK2YJL006C MET28P40573 187 aa3.44□□□□□ -1.86
CTK2YJL006C ALT2P52892 507 aa3.44□□□□□ -1.86
CTK2YJL006C BUD32P53323 261 aa3.44□□□□□ -1.86
CTK2YJL006C TOF2Q02208 771 aa3.44□□□□□ -1.86
CTK2YJL006C FIN1Q03898 291 aa3.44□□□□□ -1.86
CTK2YJL006C COQ9Q05779 260 aa3.44□□□□□ -1.86
CTK2YJL006C RLM1Q12224 676 aa3.44□□□□□ -1.86
CTK2YJL006C SEC62P21825 274 aa3.43□□□□□ -1.86
CTK2YJL006C OCA4P25366 362 aa3.43□□□□□ -1.86
CTK2YJL006C PRD1P25375 712 aa3.43□□□□□ -1.86
CTK2YJL006C NDC1P32500 655 aa3.43□□□□□ -1.86
CTK2YJL006C WBP1P33767 430 aaKnown RBP3.43□□□□□ -1.86
CTK2YJL006C SHP1P34223 423 aa3.43□□□□□ -1.86
CTK2YJL006C ECM15P35195 104 aa3.43□□□□□ -1.86
CTK2YJL006C YNK1P36010 153 aaKnown RBP3.43□□□□□ -1.86
CTK2YJL006C TIF5P38431 405 aaKnown RBP3.43□□□□□ -1.86
CTK2YJL006C PRE5P40302 234 aaKnown RBP3.43□□□□□ -1.86
CTK2YJL006C ALK1P43633 760 aaKnown RBP3.43□□□□□ -1.86
CTK2YJL006C YJR154WP47181 346 aa3.43□□□□□ -1.86
CTK2YJL006C DRN1P53255 507 aaKnown RBP3.43□□□□□ -1.86
CTK2YJL006C MFB1Q04922 465 aa3.43□□□□□ -1.86
CTK2YJL006C HSH49Q99181 213 aaPredicted RBP3.43□□□□□ -1.86
CTK2YJL006C FOB1O13329 566 aa3.42□□□□□ -1.86
CTK2YJL006C SUC2P00724 532 aa3.42□□□□□ -1.86
CTK2YJL006C MRP7P12687 371 aa3.42□□□□□ -1.86
CTK2YJL006C APE1P14904 514 aa3.42□□□□□ -1.86
CTK2YJL006C MTF1P14908 341 aaKnown RBP3.42□□□□□ -1.86
CTK2YJL006C SRO77P38163 1010 aa3.42□□□□□ -1.86
CTK2YJL006C RMD8P43620 662 aa3.42□□□□□ -1.86
CTK2YJL006C RPT6Q01939 405 aaKnown RBP3.42□□□□□ -1.86
CTK2YJL006C VPS72Q03388 795 aa3.42□□□□□ -1.86
CTK2YJL006C YMR087WQ04299 284 aa3.42□□□□□ -1.86
CTK2YJL006C ARG3P05150 338 aa3.41□□□□□ -1.86
CTK2YJL006C RAD52P06778 471 aaKnown RBP3.41□□□□□ -1.86
CTK2YJL006C PRP2P20095 876 aaPredicted RBP3.41□□□□□ -1.86
CTK2YJL006C LSB5P25369 354 aa3.41□□□□□ -1.86
CTK2YJL006C YME1P32795 747 aa3.41□□□□□ -1.86
CTK2YJL006C MRE11P32829 692 aa3.41□□□□□ -1.86
CTK2YJL006C DUG2P38149 878 aa3.41□□□□□ -1.86
CTK2YJL006C MUM2P38236 366 aa3.41□□□□□ -1.86
CTK2YJL006C OSH3P38713 996 aaKnown RBP3.41□□□□□ -1.86
CTK2YJL006C YEL057CP39983 233 aa3.41□□□□□ -1.86
CTK2YJL006C SPO22P40511 975 aa3.41□□□□□ -1.86
CTK2YJL006C TIM10P87108 93 aa3.41□□□□□ -1.86
CTK2YJL006C COG4Q06096 861 aa3.41□□□□□ -1.86
CTK2YJL006C THP1Q08231 455 aa3.41□□□□□ -1.86
CTK2YJL006C PAP1P29468 568 aaKnown RBP3.4□□□□□ -1.87
CTK2YJL006C SPC110P32380 944 aa3.4□□□□□ -1.87
CTK2YJL006C RPN12P32496 274 aa3.4□□□□□ -1.87
CTK2YJL006C PTR2P32901 601 aa3.4□□□□□ -1.87
CTK2YJL006C SIP2P34164 415 aaKnown RBP3.4□□□□□ -1.87
CTK2YJL006C BNA4P38169 460 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms