RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W PMT1P33775 817 aa2.24□□□□□ -2.05
MSL1YIR009W SEF1P34228 1148 aa2.24□□□□□ -2.05
MSL1YIR009W STV1P37296 890 aa2.24□□□□□ -2.05
MSL1YIR009W LRP1P38801 184 aaKnown RBP2.24□□□□□ -2.05
MSL1YIR009W SEC31P38968 1273 aaKnown RBP2.24□□□□□ -2.05
MSL1YIR009W ALG5P40350 334 aa2.24□□□□□ -2.05
MSL1YIR009W JEM1P40358 645 aa2.24□□□□□ -2.05
MSL1YIR009W MET28P40573 187 aa2.24□□□□□ -2.05
MSL1YIR009W RPN11P43588 306 aaKnown RBP2.24□□□□□ -2.05
MSL1YIR009W PET130P47065 347 aa2.24□□□□□ -2.05
MSL1YIR009W ATP22P50273 684 aaPredicted RBP2.24□□□□□ -2.05
MSL1YIR009W DIA3P52290 468 aa2.24□□□□□ -2.05
MSL1YIR009W STR3P53101 465 aaKnown RBP2.24□□□□□ -2.05
MSL1YIR009W NNF2P53253 936 aa2.24□□□□□ -2.05
MSL1YIR009W YDR131CQ03899 556 aa2.24□□□□□ -2.05
MSL1YIR009W YLR345WQ06137 509 aa2.24□□□□□ -2.05
MSL1YIR009W LUC7Q07508 261 aaPredicted RBP2.24□□□□□ -2.05
MSL1YIR009W FMP40Q08968 688 aaPredicted RBP2.24□□□□□ -2.05
MSL1YIR009W PPT2Q12036 173 aa2.24□□□□□ -2.05
MSL1YIR009W RLM1Q12224 676 aa2.24□□□□□ -2.05
MSL1YIR009W PAR32Q12515 295 aaKnown RBP2.24□□□□□ -2.05
MSL1YIR009W AFI1Q99222 893 aa2.24□□□□□ -2.05
MSL1YIR009W BPT1P14772 1559 aa2.23□□□□□ -2.05
MSL1YIR009W CYB2P00175 591 aa2.23□□□□□ -2.05
MSL1YIR009W MRS3P10566 314 aa2.23□□□□□ -2.05
MSL1YIR009W MRP13P12686 339 aa2.23□□□□□ -2.05
MSL1YIR009W RPB8P20436 146 aa2.23□□□□□ -2.05
MSL1YIR009W CLB1P24868 471 aa2.23□□□□□ -2.05
MSL1YIR009W BUD14P27637 709 aa2.23□□□□□ -2.05
MSL1YIR009W PDB1P32473 366 aaKnown RBP2.23□□□□□ -2.05
MSL1YIR009W MDL1P33310 695 aa2.23□□□□□ -2.05
MSL1YIR009W TCD2P36101 447 aaKnown RBP2.23□□□□□ -2.05
MSL1YIR009W AVT5P38176 459 aa2.23□□□□□ -2.05
MSL1YIR009W RXT2P38255 430 aa2.23□□□□□ -2.05
MSL1YIR009W ICS2P38284 255 aa2.23□□□□□ -2.05
MSL1YIR009W OTU2P38747 307 aaKnown RBP2.23□□□□□ -2.05
MSL1YIR009W CCT6P39079 546 aa2.23□□□□□ -2.05
MSL1YIR009W PHO90P39535 881 aa2.23□□□□□ -2.05
MSL1YIR009W GDI1P39958 451 aaKnown RBP2.23□□□□□ -2.05
MSL1YIR009W ECM10P39987 644 aa2.23□□□□□ -2.05
MSL1YIR009W PTR3P43606 678 aa2.23□□□□□ -2.05
MSL1YIR009W GUF1P46943 645 aa2.23□□□□□ -2.05
MSL1YIR009W DPB11P47027 764 aaPredicted RBP2.23□□□□□ -2.05
MSL1YIR009W YJL055WP47044 245 aa2.23□□□□□ -2.05
MSL1YIR009W BTN2P53286 410 aa2.23□□□□□ -2.05
MSL1YIR009W BNI5P53890 448 aaKnown RBP2.23□□□□□ -2.05
MSL1YIR009W MEH1Q02205 184 aa2.23□□□□□ -2.05
MSL1YIR009W ROY1Q04847 553 aa2.23□□□□□ -2.05
MSL1YIR009W MRD1Q06106 887 aaKnown RBP2.23□□□□□ -2.05
MSL1YIR009W YDL218WQ07629 317 aa2.23□□□□□ -2.05
MSL1YIR009W FMP45Q07651 309 aa2.23□□□□□ -2.05
MSL1YIR009W YOL159CQ08300 171 aa2.23□□□□□ -2.05
MSL1YIR009W ATG29Q12092 213 aa2.23□□□□□ -2.05
MSL1YIR009W AVL9Q12500 764 aa2.23□□□□□ -2.05
MSL1YIR009W YOR093CQ12275 1648 aa2.22□□□□□ -2.05
MSL1YIR009W APE1P14904 514 aa2.22□□□□□ -2.05
MSL1YIR009W PPH22P23595 377 aa2.22□□□□□ -2.05
MSL1YIR009W IMG1P25626 169 aa2.22□□□□□ -2.05
MSL1YIR009W YCR051WP25631 222 aa2.22□□□□□ -2.05
MSL1YIR009W ERV1P27882 189 aa2.22□□□□□ -2.05
MSL1YIR009W GAC1P28006 793 aa2.22□□□□□ -2.05
MSL1YIR009W YME1P32795 747 aa2.22□□□□□ -2.05
MSL1YIR009W LOS1P33418 1100 aaPredicted RBP2.22□□□□□ -2.05
MSL1YIR009W TIF3P34167 436 aaKnown RBP2.22□□□□□ -2.05
MSL1YIR009W YBR144CP34215 104 aa2.22□□□□□ -2.05
MSL1YIR009W CMC1P36064 111 aa2.22□□□□□ -2.05
MSL1YIR009W ERG7P38604 731 aa2.22□□□□□ -2.05
MSL1YIR009W ANS1P38832 159 aa2.22□□□□□ -2.05
MSL1YIR009W YIL060WP40519 144 aa2.22□□□□□ -2.05
MSL1YIR009W DIM1P41819 318 aaKnown RBP2.22□□□□□ -2.05
MSL1YIR009W HXT14P42833 540 aa2.22□□□□□ -2.05
MSL1YIR009W MNP1P53163 194 aaPredicted RBP2.22□□□□□ -2.05
MSL1YIR009W YGR016WP53209 190 aa2.22□□□□□ -2.05
MSL1YIR009W IST1P53843 298 aaPredicted RBP2.22□□□□□ -2.05
MSL1YIR009W JJJ1P53863 590 aa2.22□□□□□ -2.05
MSL1YIR009W CIK1Q01649 594 aa2.22□□□□□ -2.05
MSL1YIR009W NUP100Q02629 959 aa2.22□□□□□ -2.05
MSL1YIR009W OAZ1Q02803 292 aa2.22□□□□□ -2.05
MSL1YIR009W INA17Q02888 182 aa2.22□□□□□ -2.05
MSL1YIR009W ARX1Q03862 593 aaKnown RBP2.22□□□□□ -2.05
MSL1YIR009W YDR286CQ05530 114 aa2.22□□□□□ -2.05
MSL1YIR009W ECM30Q06673 1274 aa2.22□□□□□ -2.05
MSL1YIR009W TEN1Q07921 160 aa2.22□□□□□ -2.05
MSL1YIR009W INP53Q12271 1107 aa2.22□□□□□ -2.05
MSL1YIR009W PDH1Q12428 516 aaKnown RBP2.22□□□□□ -2.05
MSL1YIR009W RPA190P10964 1664 aaKnown RBP2.22□□□□□ -2.05
MSL1YIR009W ESC1Q03661 1658 aaKnown RBP2.22□□□□□ -2.05
MSL1YIR009W HSP82P02829 709 aaKnown RBP2.21□□□□□ -2.06
MSL1YIR009W CDC25P04821 1589 aa2.21□□□□□ -2.06
MSL1YIR009W REV1P12689 985 aa2.21□□□□□ -2.06
MSL1YIR009W CBS2P14905 389 aa2.21□□□□□ -2.06
MSL1YIR009W SPE2P21182 396 aa2.21□□□□□ -2.06
MSL1YIR009W ADH7P25377 361 aa2.21□□□□□ -2.06
MSL1YIR009W ERG1P32476 496 aaKnown RBP2.21□□□□□ -2.06
MSL1YIR009W SSE2P32590 693 aaKnown RBP2.21□□□□□ -2.06
MSL1YIR009W WBP1P33767 430 aaKnown RBP2.21□□□□□ -2.06
MSL1YIR009W MIC60P36112 540 aa2.21□□□□□ -2.06
MSL1YIR009W SPC34P36131 295 aa2.21□□□□□ -2.06
MSL1YIR009W DIA4P38705 446 aaPredicted RBP2.21□□□□□ -2.06
MSL1YIR009W YNG2P38806 282 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms