RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W TCM62P38228 572 aaKnown RBP3.31□□□□□ -1.88
SEC4YFL005W ARC40P38328 384 aaKnown RBP3.31□□□□□ -1.88
SEC4YFL005W MBB1P39534 108 aa3.31□□□□□ -1.88
SEC4YFL005W AXL1P40851 1208 aa3.31□□□□□ -1.88
SEC4YFL005W YJR154WP47181 346 aa3.31□□□□□ -1.88
SEC4YFL005W BUD32P53323 261 aa3.31□□□□□ -1.88
SEC4YFL005W SMA1Q02651 245 aa3.31□□□□□ -1.88
SEC4YFL005W YMR034CQ05131 434 aaPredicted RBP3.31□□□□□ -1.88
SEC4YFL005W DIC1Q06143 298 aa3.31□□□□□ -1.88
SEC4YFL005W VTA1Q06263 330 aa3.31□□□□□ -1.88
SEC4YFL005W YLR352WQ06479 807 aa3.31□□□□□ -1.88
SEC4YFL005W SRL1Q08673 210 aa3.31□□□□□ -1.88
SEC4YFL005W APL5Q08951 932 aaKnown RBP3.31□□□□□ -1.88
SEC4YFL005W YOL159C-AQ3E769 90 aa3.31□□□□□ -1.88
SEC4YFL005W YML133CQ03099 1374 aa3.3□□□□□ -1.88
SEC4YFL005W YLL067CQ07888 1374 aa3.3□□□□□ -1.88
SEC4YFL005W YLL066CQ99208 1374 aa3.3□□□□□ -1.88
SEC4YFL005W RAD52P06778 471 aaKnown RBP3.3□□□□□ -1.88
SEC4YFL005W TYR1P20049 452 aa3.3□□□□□ -1.88
SEC4YFL005W RPN2P32565 945 aaKnown RBP3.3□□□□□ -1.88
SEC4YFL005W RAD24P32641 659 aa3.3□□□□□ -1.88
SEC4YFL005W DUG2P38149 878 aa3.3□□□□□ -1.88
SEC4YFL005W BNA4P38169 460 aa3.3□□□□□ -1.88
SEC4YFL005W RKM3P38222 552 aa3.3□□□□□ -1.88
SEC4YFL005W EFM2P38347 419 aa3.3□□□□□ -1.88
SEC4YFL005W TIF4631P39935 952 aaKnown RBP3.3□□□□□ -1.88
SEC4YFL005W GPD2P41911 440 aaKnown RBP3.3□□□□□ -1.88
SEC4YFL005W ATG27P46989 271 aa3.3□□□□□ -1.88
SEC4YFL005W DRN1P53255 507 aaKnown RBP3.3□□□□□ -1.88
SEC4YFL005W YGR250CP53316 781 aaKnown RBP3.3□□□□□ -1.88
SEC4YFL005W SAM50P53969 484 aa3.3□□□□□ -1.88
SEC4YFL005W HEF3P53978 1044 aaKnown RBP3.3□□□□□ -1.88
SEC4YFL005W GIR2Q03768 265 aaPredicted RBP3.3□□□□□ -1.88
SEC4YFL005W MSS11Q03825 758 aa3.3□□□□□ -1.88
SEC4YFL005W TAP42Q04372 366 aa3.3□□□□□ -1.88
SEC4YFL005W GLO2Q05584 274 aa3.3□□□□□ -1.88
SEC4YFL005W BSC1Q12140 328 aa3.3□□□□□ -1.88
SEC4YFL005W PDH1Q12428 516 aaKnown RBP3.3□□□□□ -1.88
SEC4YFL005W SUC2P00724 532 aa3.29□□□□□ -1.88
SEC4YFL005W COR1P07256 457 aa3.29□□□□□ -1.88
SEC4YFL005W PDX1P16451 410 aa3.29□□□□□ -1.88
SEC4YFL005W CLC1P17891 233 aa3.29□□□□□ -1.88
SEC4YFL005W HNM1P19807 563 aa3.29□□□□□ -1.88
SEC4YFL005W SGV1P23293 657 aaKnown RBP3.29□□□□□ -1.88
SEC4YFL005W YCR043CP25361 127 aa3.29□□□□□ -1.88
SEC4YFL005W VPS17P32913 551 aa3.29□□□□□ -1.88
SEC4YFL005W SAS3P34218 831 aa3.29□□□□□ -1.88
SEC4YFL005W MET30P39014 640 aa3.29□□□□□ -1.88
SEC4YFL005W YIR014WP40570 242 aa3.29□□□□□ -1.88
SEC4YFL005W TES1P41903 349 aaKnown RBP3.29□□□□□ -1.88
SEC4YFL005W DLD2P46681 530 aaKnown RBP3.29□□□□□ -1.88
SEC4YFL005W YGL082WP53155 381 aa3.29□□□□□ -1.88
SEC4YFL005W ZPR1P53303 486 aaKnown RBP3.29□□□□□ -1.88
SEC4YFL005W SLG1P54867 378 aa3.29□□□□□ -1.88
SEC4YFL005W DIG1Q03063 452 aaKnown RBP3.29□□□□□ -1.88
SEC4YFL005W YDR415CQ04033 374 aaPredicted RBP3.29□□□□□ -1.88
SEC4YFL005W THI20Q08224 551 aa3.29□□□□□ -1.88
SEC4YFL005W RAV1P47104 1357 aa3.28□□□□□ -1.88
SEC4YFL005W BUD14P27637 709 aa3.28□□□□□ -1.88
SEC4YFL005W RAD14P28519 371 aa3.28□□□□□ -1.88
SEC4YFL005W ACH1P32316 526 aa3.28□□□□□ -1.88
SEC4YFL005W MSN2P33748 704 aa3.28□□□□□ -1.88
SEC4YFL005W RRP3P38712 501 aaKnown RBP3.28□□□□□ -1.88
SEC4YFL005W YER130CP39959 443 aa3.28□□□□□ -1.88
SEC4YFL005W YTA12P40341 825 aa3.28□□□□□ -1.88
SEC4YFL005W YIL169CP40442 995 aa3.28□□□□□ -1.88
SEC4YFL005W CSM2P40465 213 aa3.28□□□□□ -1.88
SEC4YFL005W GUF1P46943 645 aa3.28□□□□□ -1.88
SEC4YFL005W CUL3P53202 744 aa3.28□□□□□ -1.88
SEC4YFL005W TDA7P53882 636 aaPredicted RBP3.28□□□□□ -1.88
SEC4YFL005W FMP42Q04991 504 aa3.28□□□□□ -1.88
SEC4YFL005W RBS1Q05672 457 aaKnown RBP3.28□□□□□ -1.88
SEC4YFL005W YEH2Q07950 538 aa3.28□□□□□ -1.88
SEC4YFL005W ERP4Q12450 207 aa3.28□□□□□ -1.88
SEC4YFL005W APE1P14904 514 aa3.27□□□□□ -1.89
SEC4YFL005W REC107P21651 314 aa3.27□□□□□ -1.89
SEC4YFL005W RPC53P25441 422 aa3.27□□□□□ -1.89
SEC4YFL005W HXT3P32466 567 aaKnown RBP3.27□□□□□ -1.89
SEC4YFL005W ERG1P32476 496 aaKnown RBP3.27□□□□□ -1.89
SEC4YFL005W UTR4P32626 227 aa3.27□□□□□ -1.89
SEC4YFL005W YNK1P36010 153 aaKnown RBP3.27□□□□□ -1.89
SEC4YFL005W AZF1P41696 914 aa3.27□□□□□ -1.89
SEC4YFL005W YGL108CP53139 140 aa3.27□□□□□ -1.89
SEC4YFL005W RPA49Q01080 415 aaPredicted RBP3.27□□□□□ -1.89
SEC4YFL005W YDR131CQ03899 556 aa3.27□□□□□ -1.89
SEC4YFL005W FMP45Q07651 309 aa3.27□□□□□ -1.89
SEC4YFL005W RHO2P06781 192 aa3.26□□□□□ -1.89
SEC4YFL005W SPS4P09937 338 aa3.26□□□□□ -1.89
SEC4YFL005W BAR1P12630 587 aa3.26□□□□□ -1.89
SEC4YFL005W RPL3P14126 387 aaKnown RBP3.26□□□□□ -1.89
SEC4YFL005W GLN3P18494 730 aa3.26□□□□□ -1.89
SEC4YFL005W SEC62P21825 274 aa3.26□□□□□ -1.89
SEC4YFL005W YCR007CP25354 239 aa3.26□□□□□ -1.89
SEC4YFL005W SPB1P25582 841 aaPredicted RBP3.26□□□□□ -1.89
SEC4YFL005W ADK2P26364 225 aa3.26□□□□□ -1.89
SEC4YFL005W AFG1P32317 509 aa3.26□□□□□ -1.89
SEC4YFL005W DBF4P32325 704 aa3.26□□□□□ -1.89
SEC4YFL005W TRS65P32893 560 aa3.26□□□□□ -1.89
SEC4YFL005W HCS1P34243 683 aa3.26□□□□□ -1.89
SEC4YFL005W ECM15P35195 104 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms