RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C RPL20BP0CX24 172 aaPredicted RBP2.5□□□□□ -2.01
SMB1YER029C ART10P18634 518 aaKnown RBP2.5□□□□□ -2.01
SMB1YER029C UBP11P36026 717 aa2.5□□□□□ -2.01
SMB1YER029C PCA1P38360 1216 aa2.5□□□□□ -2.01
SMB1YER029C HAT2P39984 401 aa2.5□□□□□ -2.01
SMB1YER029C GLO2Q05584 274 aa2.5□□□□□ -2.01
SMB1YER029C YDR056CQ12025 205 aa2.5□□□□□ -2.01
SMB1YER029C HSH49Q99181 213 aaPredicted RBP2.5□□□□□ -2.01
SMB1YER029C YPT6Q99260 215 aa2.5□□□□□ -2.01
SMB1YER029C CBS2P14905 389 aa2.49□□□□□ -2.01
SMB1YER029C OLE1P21147 510 aaKnown RBP2.49□□□□□ -2.01
SMB1YER029C PUT3P25502 979 aaPredicted RBP2.49□□□□□ -2.01
SMB1YER029C PMU1P36069 295 aa2.49□□□□□ -2.01
SMB1YER029C YBL029WP38201 376 aa2.49□□□□□ -2.01
SMB1YER029C MUM2P38236 366 aa2.49□□□□□ -2.01
SMB1YER029C TIF4631P39935 952 aaKnown RBP2.49□□□□□ -2.01
SMB1YER029C NOP16P40007 231 aaKnown RBP2.49□□□□□ -2.01
SMB1YER029C SGN1P40561 250 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SMB1YER029C IMD4P50094 524 aaKnown RBP2.49□□□□□ -2.01
SMB1YER029C YGL082WP53155 381 aa2.49□□□□□ -2.01
SMB1YER029C YDL057WQ07379 328 aa2.49□□□□□ -2.01
SMB1YER029C CAR1P00812 333 aaKnown RBP2.48□□□□□ -2.01
SMB1YER029C ATR1P13090 542 aa2.48□□□□□ -2.01
SMB1YER029C AAC3P18238 307 aa2.48□□□□□ -2.01
SMB1YER029C SUI2P20459 304 aaKnown RBP2.48□□□□□ -2.01
SMB1YER029C SAN1P22470 610 aa2.48□□□□□ -2.01
SMB1YER029C PRD1P25375 712 aa2.48□□□□□ -2.01
SMB1YER029C MSN2P33748 704 aa2.48□□□□□ -2.01
SMB1YER029C KEL1P38853 1164 aaKnown RBP2.48□□□□□ -2.01
SMB1YER029C VID27P40157 782 aa2.48□□□□□ -2.01
SMB1YER029C IDP2P41939 412 aa2.48□□□□□ -2.01
SMB1YER029C SPG5P42933 373 aa2.48□□□□□ -2.01
SMB1YER029C MRX6P48564 524 aa2.48□□□□□ -2.01
SMB1YER029C ARK1P53974 638 aa2.48□□□□□ -2.01
SMB1YER029C IVY1Q04934 453 aa2.48□□□□□ -2.01
SMB1YER029C PHO92Q06390 306 aa2.48□□□□□ -2.01
SMB1YER029C RSA1Q08932 381 aa2.48□□□□□ -2.01
SMB1YER029C KEL3Q08979 651 aaPredicted RBP2.48□□□□□ -2.01
SMB1YER029C RLM1Q12224 676 aa2.48□□□□□ -2.01
SMB1YER029C CYB2P00175 591 aa2.47□□□□□ -2.01
SMB1YER029C EST1P17214 699 aaPredicted RBP2.47□□□□□ -2.01
SMB1YER029C PRP2P20095 876 aaPredicted RBP2.47□□□□□ -2.01
SMB1YER029C UTR4P32626 227 aa2.47□□□□□ -2.01
SMB1YER029C SHP1P34223 423 aa2.47□□□□□ -2.01
SMB1YER029C YNK1P36010 153 aaKnown RBP2.47□□□□□ -2.01
SMB1YER029C TCD2P36101 447 aaKnown RBP2.47□□□□□ -2.01
SMB1YER029C DUG2P38149 878 aa2.47□□□□□ -2.01
SMB1YER029C TCM62P38228 572 aaKnown RBP2.47□□□□□ -2.01
SMB1YER029C ALG8P40351 577 aa2.47□□□□□ -2.01
SMB1YER029C YPI1P43587 155 aa2.47□□□□□ -2.01
SMB1YER029C ALK1P43633 760 aaKnown RBP2.47□□□□□ -2.01
SMB1YER029C MSO1P53604 210 aaKnown RBP2.47□□□□□ -2.01
SMB1YER029C IPI3P53877 555 aa2.47□□□□□ -2.01
SMB1YER029C HEF3P53978 1044 aaKnown RBP2.47□□□□□ -2.01
SMB1YER029C MRPL51Q06090 140 aaPredicted RBP2.47□□□□□ -2.01
SMB1YER029C THP1Q08231 455 aa2.47□□□□□ -2.01
SMB1YER029C LSP1Q12230 341 aaKnown RBP2.47□□□□□ -2.01
SMB1YER029C RKM5Q12367 367 aa2.47□□□□□ -2.01
SMB1YER029C CTF3Q12748 733 aa2.47□□□□□ -2.01
SMB1YER029C YJR112W-AQ3E743 109 aa2.47□□□□□ -2.01
SMB1YER029C YCL021W-AQ96VH3 125 aa2.47□□□□□ -2.01
SMB1YER029C PMR1P13586 950 aa2.46□□□□□ -2.02
SMB1YER029C WBP1P33767 430 aaKnown RBP2.46□□□□□ -2.02
SMB1YER029C SEF1P34228 1148 aa2.46□□□□□ -2.02
SMB1YER029C FAA2P39518 744 aa2.46□□□□□ -2.02
SMB1YER029C AFG3P39925 761 aa2.46□□□□□ -2.02
SMB1YER029C SHO1P40073 367 aa2.46□□□□□ -2.02
SMB1YER029C ALG5P40350 334 aa2.46□□□□□ -2.02
SMB1YER029C YJL132WP47014 750 aa2.46□□□□□ -2.02
SMB1YER029C VID30P53076 958 aa2.46□□□□□ -2.02
SMB1YER029C WSC2P53832 503 aa2.46□□□□□ -2.02
SMB1YER029C SLG1P54867 378 aa2.46□□□□□ -2.02
SMB1YER029C TOF2Q02208 771 aa2.46□□□□□ -2.02
SMB1YER029C FIN1Q03898 291 aa2.46□□□□□ -2.02
SMB1YER029C RBS1Q05672 457 aaKnown RBP2.46□□□□□ -2.02
SMB1YER029C IMH1Q06704 911 aaKnown RBP2.46□□□□□ -2.02
SMB1YER029C CTI6Q08923 506 aa2.46□□□□□ -2.02
SMB1YER029C CFT2Q12102 859 aaPredicted RBP2.46□□□□□ -2.02
SMB1YER029C HUA2Q12134 243 aa2.46□□□□□ -2.02
SMB1YER029C ATP11P32453 318 aa2.45□□□□□ -2.02
SMB1YER029C TUL1P36096 758 aa2.45□□□□□ -2.02
SMB1YER029C BNA4P38169 460 aa2.45□□□□□ -2.02
SMB1YER029C RFS1P38234 210 aaKnown RBP2.45□□□□□ -2.02
SMB1YER029C MSR1P38714 643 aa2.45□□□□□ -2.02
SMB1YER029C NPR2P39923 615 aa2.45□□□□□ -2.02
SMB1YER029C YMR147WP40218 223 aaKnown RBP2.45□□□□□ -2.02
SMB1YER029C GWT1P47026 490 aa2.45□□□□□ -2.02
SMB1YER029C VPS75P53853 264 aa2.45□□□□□ -2.02
SMB1YER029C MFB1Q04922 465 aa2.45□□□□□ -2.02
SMB1YER029C RRD2Q12461 358 aa2.45□□□□□ -2.02
SMB1YER029C YER078W-AQ3E7A2 54 aa2.45□□□□□ -2.02
SMB1YER029C COR1P07256 457 aa2.44□□□□□ -2.02
SMB1YER029C SEC53P07283 254 aaKnown RBP2.44□□□□□ -2.02
SMB1YER029C MET8P15807 274 aa2.44□□□□□ -2.02
SMB1YER029C GLK1P17709 500 aaKnown RBP2.44□□□□□ -2.02
SMB1YER029C YEL057CP39983 233 aa2.44□□□□□ -2.02
SMB1YER029C MET28P40573 187 aa2.44□□□□□ -2.02
SMB1YER029C GCD10P41814 478 aa2.44□□□□□ -2.02
SMB1YER029C GPI1P53306 609 aa2.44□□□□□ -2.02
SMB1YER029C ARE2P53629 642 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms