RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C GPR1Q12361 961 aa10.54□□□□□ -0.72
SPC25YER018C DST1P07273 309 aa10.53□□□□□ -0.72
SPC25YER018C SGV1P23293 657 aaKnown RBP10.53□□□□□ -0.72
SPC25YER018C MGM101P32787 269 aaKnown RBP10.53□□□□□ -0.72
SPC25YER018C RMA1P36001 430 aaKnown RBP10.53□□□□□ -0.72
SPC25YER018C CAF4P36130 643 aa10.53□□□□□ -0.72
SPC25YER018C NDE1P40215 560 aa10.53□□□□□ -0.72
SPC25YER018C MEP2P41948 499 aa10.53□□□□□ -0.72
SPC25YER018C GTO1P48239 356 aa10.53□□□□□ -0.72
SPC25YER018C MIG2P53035 382 aa10.53□□□□□ -0.72
SPC25YER018C ARC35P53731 342 aaKnown RBP10.53□□□□□ -0.72
SPC25YER018C PRP38Q00723 242 aaPredicted RBP10.53□□□□□ -0.72
SPC25YER018C MET31Q03081 177 aa10.53□□□□□ -0.72
SPC25YER018C ROT1Q03691 256 aa10.53□□□□□ -0.72
SPC25YER018C VHS1Q03785 461 aa10.53□□□□□ -0.72
SPC25YER018C BRR1Q99177 341 aaPredicted RBP10.53□□□□□ -0.72
SPC25YER018C PDC5P16467 563 aaKnown RBP10.52□□□□□ -0.73
SPC25YER018C SCL1P21243 252 aaKnown RBP10.52□□□□□ -0.73
SPC25YER018C OCA4P25366 362 aa10.52□□□□□ -0.73
SPC25YER018C ZIP1P31111 875 aa10.52□□□□□ -0.73
SPC25YER018C HXT4P32467 576 aa10.52□□□□□ -0.73
SPC25YER018C WSC4P38739 605 aa10.52□□□□□ -0.73
SPC25YER018C HXT6P39003 570 aaKnown RBP10.52□□□□□ -0.73
SPC25YER018C HXT7P39004 570 aa10.52□□□□□ -0.73
SPC25YER018C CAB2P40506 365 aa10.52□□□□□ -0.73
SPC25YER018C ZIM17P42844 174 aa10.52□□□□□ -0.73
SPC25YER018C NAS6P50086 228 aa10.52□□□□□ -0.73
SPC25YER018C IMA1P53051 589 aa10.52□□□□□ -0.73
SPC25YER018C BCP1Q06338 283 aa10.52□□□□□ -0.73
SPC25YER018C MHT1Q12525 324 aa10.52□□□□□ -0.73
SPC25YER018C YCL012CQ8J0M4 134 aa10.52□□□□□ -0.73
SPC25YER018C AI3P03877 415 aa10.51□□□□□ -0.73
SPC25YER018C CCA1P21269 546 aa10.51□□□□□ -0.73
SPC25YER018C MUM2P38236 366 aa10.51□□□□□ -0.73
SPC25YER018C UBP14P38237 781 aaKnown RBP10.51□□□□□ -0.73
SPC25YER018C HPM1P40481 377 aa10.51□□□□□ -0.73
SPC25YER018C YFR020WP43600 232 aa10.51□□□□□ -0.73
SPC25YER018C MPS3P47069 682 aa10.51□□□□□ -0.73
SPC25YER018C MTR3P48240 250 aaPredicted RBP10.51□□□□□ -0.73
SPC25YER018C KXD1P53158 218 aa10.51□□□□□ -0.73
SPC25YER018C ACL4Q03771 387 aa10.51□□□□□ -0.73
SPC25YER018C YDR124WQ04608 324 aa10.51□□□□□ -0.73
SPC25YER018C PFA4Q12006 378 aa10.51□□□□□ -0.73
SPC25YER018C HRP1Q99383 534 aaKnown RBP10.51□□□□□ -0.73
SPC25YER018C MEI5P32489 222 aa10.5□□□□□ -0.73
SPC25YER018C STE14P32584 239 aa10.5□□□□□ -0.73
SPC25YER018C FRE2P36033 711 aa10.5□□□□□ -0.73
SPC25YER018C TRM7P38238 310 aaKnown RBP10.5□□□□□ -0.73
SPC25YER018C SSU1P41930 458 aa10.5□□□□□ -0.73
SPC25YER018C PTR3P43606 678 aa10.5□□□□□ -0.73
SPC25YER018C NUP85P46673 744 aa10.5□□□□□ -0.73
SPC25YER018C YNL140CP53910 189 aa10.5□□□□□ -0.73
SPC25YER018C SWS2P53937 143 aa10.5□□□□□ -0.73
SPC25YER018C PRO2P54885 456 aaKnown RBP10.5□□□□□ -0.73
SPC25YER018C SDH1Q00711 640 aa10.5□□□□□ -0.73
SPC25YER018C TRM82Q03774 444 aa10.5□□□□□ -0.73
SPC25YER018C BSC2Q05611 235 aa10.5□□□□□ -0.73
SPC25YER018C YVC1Q12324 675 aa10.5□□□□□ -0.73
SPC25YER018C SUL2Q12325 893 aa10.5□□□□□ -0.73
SPC25YER018C NHA1Q99271 985 aa10.5□□□□□ -0.73
SPC25YER018C HTA2P04912 132 aa10.49□□□□□ -0.73
SPC25YER018C REC107P21651 314 aa10.49□□□□□ -0.73
SPC25YER018C PPH21P23594 369 aa10.49□□□□□ -0.73
SPC25YER018C MEF1P25039 761 aa10.49□□□□□ -0.73
SPC25YER018C PHO87P25360 923 aa10.49□□□□□ -0.73
SPC25YER018C FUN30P31380 1131 aa10.49□□□□□ -0.73
SPC25YER018C PET309P32522 965 aaPredicted RBP10.49□□□□□ -0.73
SPC25YER018C TFB1P32776 642 aa10.49□□□□□ -0.73
SPC25YER018C NTR2P36118 322 aaPredicted RBP10.49□□□□□ -0.73
SPC25YER018C YCR087C-AP37263 153 aa10.49□□□□□ -0.73
SPC25YER018C ALG5P40350 334 aa10.49□□□□□ -0.73
SPC25YER018C AZF1P41696 914 aa10.49□□□□□ -0.73
SPC25YER018C FMP32P43557 207 aa10.49□□□□□ -0.73
SPC25YER018C MPS1P54199 764 aa10.49□□□□□ -0.73
SPC25YER018C CTK1Q03957 528 aaKnown RBP10.49□□□□□ -0.73
SPC25YER018C DYN3Q04949 312 aa10.49□□□□□ -0.73
SPC25YER018C SNX3Q08826 162 aaKnown RBP10.49□□□□□ -0.73
SPC25YER018C MDM35O60200 86 aa10.48□□□□□ -0.73
SPC25YER018C RPS21AP0C0V8 87 aaKnown RBP10.48□□□□□ -0.73
SPC25YER018C KAR1P11927 433 aa10.48□□□□□ -0.73
SPC25YER018C KIN2P13186 1147 aaKnown RBP10.48□□□□□ -0.73
SPC25YER018C SAN1P22470 610 aa10.48□□□□□ -0.73
SPC25YER018C PHO91P27514 894 aa10.48□□□□□ -0.73
SPC25YER018C ATO2P32907 282 aa10.48□□□□□ -0.73
SPC25YER018C VPS21P36017 210 aaKnown RBP10.48□□□□□ -0.73
SPC25YER018C MRPL37P36532 105 aa10.48□□□□□ -0.73
SPC25YER018C PIM1P36775 1133 aa10.48□□□□□ -0.73
SPC25YER018C ELO1P39540 310 aa10.48□□□□□ -0.73
SPC25YER018C IAH1P41734 238 aa10.48□□□□□ -0.73
SPC25YER018C MET12P46151 657 aa10.48□□□□□ -0.73
SPC25YER018C ERG26P53199 349 aaKnown RBP10.48□□□□□ -0.73
SPC25YER018C IDP3P53982 420 aaKnown RBP10.48□□□□□ -0.73
SPC25YER018C ECM11Q04110 302 aa10.48□□□□□ -0.73
SPC25YER018C MFB1Q04922 465 aa10.48□□□□□ -0.73
SPC25YER018C ATG26Q06321 1198 aa10.48□□□□□ -0.73
SPC25YER018C YLR413WQ06689 675 aa10.48□□□□□ -0.73
SPC25YER018C YIG1Q08956 461 aa10.48□□□□□ -0.73
SPC25YER018C NSL1Q12143 216 aa10.48□□□□□ -0.73
SPC25YER018C HAL9Q12180 1030 aa10.48□□□□□ -0.73
SPC25YER018C STT4P37297 1900 aa10.48□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms