RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C DBP3P20447 523 aaKnown RBP1.28□□□□□ -2.2
SEC3YER008C CST26P38226 397 aa1.28□□□□□ -2.2
SEC3YER008C ANS1P38832 159 aa1.28□□□□□ -2.2
SEC3YER008C SSP120P39931 234 aaKnown RBP1.28□□□□□ -2.2
SEC3YER008C RRP46P53256 223 aaPredicted RBP1.28□□□□□ -2.2
SEC3YER008C FHN1P53279 174 aa1.28□□□□□ -2.2
SEC3YER008C COQ6P53318 479 aa1.28□□□□□ -2.2
SEC3YER008C DUG3P53871 357 aa1.28□□□□□ -2.2
SEC3YER008C ERG13P54839 491 aaKnown RBP1.28□□□□□ -2.2
SEC3YER008C YDR415CQ04033 374 aaPredicted RBP1.28□□□□□ -2.2
SEC3YER008C THI7Q05998 598 aa1.28□□□□□ -2.2
SEC3YER008C TPO3Q06451 622 aa1.28□□□□□ -2.2
SEC3YER008C YEH1Q07804 573 aa1.28□□□□□ -2.2
SEC3YER008C RRT8Q08219 342 aa1.28□□□□□ -2.2
SEC3YER008C RCN2Q12044 265 aa1.28□□□□□ -2.2
SEC3YER008C GIS3Q12418 502 aa1.28□□□□□ -2.2
SEC3YER008C YLR419WQ06698 1435 aaKnown RBP1.28□□□□□ -2.2
SEC3YER008C GAL7P08431 366 aa1.28□□□□□ -2.2
SEC3YER008C MSP1P28737 362 aa1.28□□□□□ -2.2
SEC3YER008C UGP1P32861 499 aaKnown RBP1.28□□□□□ -2.2
SEC3YER008C YBL055CP34220 418 aaPredicted RBP1.28□□□□□ -2.2
SEC3YER008C YKL097CP34245 136 aa1.28□□□□□ -2.2
SEC3YER008C FLO5P38894 1075 aa1.28□□□□□ -2.2
SEC3YER008C FLC2P39719 783 aa1.28□□□□□ -2.2
SEC3YER008C GID8P40208 455 aa1.28□□□□□ -2.2
SEC3YER008C CRD1Q07560 283 aa1.28□□□□□ -2.2
SEC3YER008C LEU9Q12166 604 aaKnown RBP1.28□□□□□ -2.2
SEC3YER008C YER145C-AA0A023PYF4 145 aa1.28□□□□□ -2.21
SEC3YER008C CAR2P07991 424 aaKnown RBP1.28□□□□□ -2.21
SEC3YER008C CNE1P27825 502 aa1.28□□□□□ -2.21
SEC3YER008C GDA1P32621 518 aa1.28□□□□□ -2.21
SEC3YER008C WBP1P33767 430 aaKnown RBP1.28□□□□□ -2.21
SEC3YER008C YEL020CP39994 560 aa1.28□□□□□ -2.21
SEC3YER008C PKP1P40530 394 aa1.28□□□□□ -2.21
SEC3YER008C BAP3P41815 604 aa1.28□□□□□ -2.21
SEC3YER008C ARC1P46672 376 aaKnown RBP1.28□□□□□ -2.21
SEC3YER008C NPA3P47122 385 aa1.28□□□□□ -2.21
SEC3YER008C CAF130P53280 1122 aaPredicted RBP1.28□□□□□ -2.21
SEC3YER008C OGG1P53397 376 aaPredicted RBP1.28□□□□□ -2.21
SEC3YER008C HMO1Q03973 246 aaKnown RBP1.28□□□□□ -2.21
SEC3YER008C ARO10Q06408 635 aa1.28□□□□□ -2.21
SEC3YER008C YPL272CQ08984 517 aa1.28□□□□□ -2.21
SEC3YER008C POM152P39685 1337 aa1.27□□□□□ -2.21
SEC3YER008C SCH9P11792 824 aaKnown RBP1.27□□□□□ -2.21
SEC3YER008C PWP1P21304 576 aaKnown RBP1.27□□□□□ -2.21
SEC3YER008C SGV1P23293 657 aaKnown RBP1.27□□□□□ -2.21
SEC3YER008C MET28P40573 187 aa1.27□□□□□ -2.21
SEC3YER008C PNC1P53184 216 aaKnown RBP1.27□□□□□ -2.21
SEC3YER008C CIK1Q01649 594 aa1.27□□□□□ -2.21
SEC3YER008C ADA2Q02336 434 aa1.27□□□□□ -2.21
SEC3YER008C SOV1Q04748 898 aa1.27□□□□□ -2.21
SEC3YER008C CRN1Q06440 651 aa1.27□□□□□ -2.21
SEC3YER008C LUC7Q07508 261 aaPredicted RBP1.27□□□□□ -2.21
SEC3YER008C DCI1Q08558 271 aa1.27□□□□□ -2.21
SEC3YER008C GEP3Q08622 556 aa1.27□□□□□ -2.21
SEC3YER008C UAF30Q08747 228 aa1.27□□□□□ -2.21
SEC3YER008C UBX3Q12229 455 aa1.27□□□□□ -2.21
SEC3YER008C AAC1P04710 309 aa1.27□□□□□ -2.21
SEC3YER008C SPE2P21182 396 aa1.27□□□□□ -2.21
SEC3YER008C VPS34P22543 875 aa1.27□□□□□ -2.21
SEC3YER008C GRR1P24814 1151 aa1.27□□□□□ -2.21
SEC3YER008C CLB3P24870 427 aa1.27□□□□□ -2.21
SEC3YER008C MGR1P25573 417 aa1.27□□□□□ -2.21
SEC3YER008C SOF1P33750 489 aaKnown RBP1.27□□□□□ -2.21
SEC3YER008C TUL1P36096 758 aa1.27□□□□□ -2.21
SEC3YER008C IMD2P38697 523 aaKnown RBP1.27□□□□□ -2.21
SEC3YER008C NPR3P38742 1146 aa1.27□□□□□ -2.21
SEC3YER008C ALG5P40350 334 aa1.27□□□□□ -2.21
SEC3YER008C ASG1P40467 964 aa1.27□□□□□ -2.21
SEC3YER008C CAK1P43568 368 aaPredicted RBP1.27□□□□□ -2.21
SEC3YER008C YNL092WP53934 400 aa1.27□□□□□ -2.21
SEC3YER008C ERG5P54781 538 aa1.27□□□□□ -2.21
SEC3YER008C ERV25P54837 211 aaKnown RBP1.27□□□□□ -2.21
SEC3YER008C PLM2Q04383 521 aa1.27□□□□□ -2.21
SEC3YER008C TRI1Q05024 226 aa1.27□□□□□ -2.21
SEC3YER008C RTT109Q07794 436 aa1.27□□□□□ -2.21
SEC3YER008C NBP2Q12163 236 aa1.27□□□□□ -2.21
SEC3YER008C PKH2Q12236 1081 aaKnown RBP1.27□□□□□ -2.21
SEC3YER008C PSK1P31374 1356 aa1.27□□□□□ -2.21
SEC3YER008C PET111P08468 800 aa1.27□□□□□ -2.21
SEC3YER008C OM45P16547 393 aa1.27□□□□□ -2.21
SEC3YER008C APN1P22936 367 aa1.27□□□□□ -2.21
SEC3YER008C PAP1P29468 568 aaKnown RBP1.27□□□□□ -2.21
SEC3YER008C RML2P32611 393 aa1.27□□□□□ -2.21
SEC3YER008C EMP70P32802 667 aa1.27□□□□□ -2.21
SEC3YER008C YBR139WP38109 508 aa1.27□□□□□ -2.21
SEC3YER008C SPP381P38282 291 aaPredicted RBP1.27□□□□□ -2.21
SEC3YER008C SEC31P38968 1273 aaKnown RBP1.27□□□□□ -2.21
SEC3YER008C EPL1P43572 832 aa1.27□□□□□ -2.21
SEC3YER008C AAD10P47182 288 aa1.27□□□□□ -2.21
SEC3YER008C RAD17P48581 401 aa1.27□□□□□ -2.21
SEC3YER008C VPS4P52917 437 aa1.27□□□□□ -2.21
SEC3YER008C YGR111WP53265 400 aa1.27□□□□□ -2.21
SEC3YER008C HST1P53685 503 aa1.27□□□□□ -2.21
SEC3YER008C PDR16P53860 351 aaKnown RBP1.27□□□□□ -2.21
SEC3YER008C MTG1Q03151 367 aaPredicted RBP1.27□□□□□ -2.21
SEC3YER008C SMA2Q04658 369 aa1.27□□□□□ -2.21
SEC3YER008C ECM7Q06200 448 aa1.27□□□□□ -2.21
SEC3YER008C ATG29Q12092 213 aa1.27□□□□□ -2.21
SEC3YER008C PDA1P16387 420 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms