RNA–Protein interactions for RNA: YDR525W

API2, Transcript of Dubious open reading frame, yeast

Gene API2, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
API2	YDR525W	YBR032W	P38223	100 aa		4.15	□□□□□ -1.75
API2	YDR525W	MUP3	P38734	546 aa		4.15	□□□□□ -1.75
API2	YDR525W	LRP1	P38801	184 aa	Known RBP	4.15	□□□□□ -1.75
API2	YDR525W	YER158C	P40095	573 aa		4.15	□□□□□ -1.75
API2	YDR525W	ALG8	P40351	577 aa		4.15	□□□□□ -1.75
API2	YDR525W	GAT1	P43574	510 aa		4.15	□□□□□ -1.75
API2	YDR525W	BIO4	P53630	237 aa		4.15	□□□□□ -1.75
API2	YDR525W	YNL058C	P53947	316 aa		4.15	□□□□□ -1.75
API2	YDR525W	YDR109C	Q04585	715 aa		4.15	□□□□□ -1.75
API2	YDR525W	MFB1	Q04922	465 aa		4.15	□□□□□ -1.75
API2	YDR525W	NUS1	Q12063	375 aa		4.15	□□□□□ -1.75
API2	YDR525W	MRH1	Q12117	320 aa	Predicted RBP	4.15	□□□□□ -1.75
API2	YDR525W	KCS1	Q12494	1050 aa		4.15	□□□□□ -1.75
API2	YDR525W	SUC2	P00724	532 aa		4.14	□□□□□ -1.75
API2	YDR525W	CAN1	P04817	590 aa		4.14	□□□□□ -1.75
API2	YDR525W	NSP1	P14907	823 aa	Known RBP	4.14	□□□□□ -1.75
API2	YDR525W	PRI2	P20457	528 aa		4.14	□□□□□ -1.75
API2	YDR525W	EPT1	P22140	391 aa		4.14	□□□□□ -1.75
API2	YDR525W	PHO84	P25297	587 aa	Known RBP	4.14	□□□□□ -1.75
API2	YDR525W	AAD3	P25612	363 aa		4.14	□□□□□ -1.75
API2	YDR525W	YCR051W	P25631	222 aa		4.14	□□□□□ -1.75
API2	YDR525W	CTS1	P29029	562 aa		4.14	□□□□□ -1.75
API2	YDR525W	HRR25	P29295	494 aa	Known RBP	4.14	□□□□□ -1.75
API2	YDR525W	MF(ALPHA)2	P32435	120 aa		4.14	□□□□□ -1.75
API2	YDR525W	CDC12	P32468	407 aa	Known RBP	4.14	□□□□□ -1.75
API2	YDR525W	TFB1	P32776	642 aa		4.14	□□□□□ -1.75
API2	YDR525W	LTV1	P34078	463 aa		4.14	□□□□□ -1.75
API2	YDR525W	OAF3	P36023	863 aa		4.14	□□□□□ -1.75
API2	YDR525W	YBR259W	P38338	688 aa		4.14	□□□□□ -1.75
API2	YDR525W	UBA4	P38820	440 aa		4.14	□□□□□ -1.75
API2	YDR525W	CYC2	P38909	366 aa		4.14	□□□□□ -1.75
API2	YDR525W	CCT6	P39079	546 aa		4.14	□□□□□ -1.75
API2	YDR525W	SSP120	P39931	234 aa	Known RBP	4.14	□□□□□ -1.75
API2	YDR525W	SAP1	P39955	897 aa	Known RBP	4.14	□□□□□ -1.75
API2	YDR525W	TIF34	P40217	347 aa	Known RBP	4.14	□□□□□ -1.75
API2	YDR525W	PFK26	P40433	827 aa	Known RBP	4.14	□□□□□ -1.75
API2	YDR525W	SEC28	P40509	296 aa	Known RBP	4.14	□□□□□ -1.75
API2	YDR525W	CTK3	P46963	296 aa	Predicted RBP	4.14	□□□□□ -1.75
API2	YDR525W	ARP4	P80428	489 aa		4.14	□□□□□ -1.75
API2	YDR525W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
API2	YDR525W	YMR209C	Q03648	457 aa		4.14	□□□□□ -1.75
API2	YDR525W	YAP6	Q03935	383 aa		4.14	□□□□□ -1.75
API2	YDR525W	RPN9	Q04062	393 aa	Known RBP	4.14	□□□□□ -1.75
API2	YDR525W	TRM12	Q04235	462 aa		4.14	□□□□□ -1.75
API2	YDR525W	BLS1	Q06071	122 aa		4.14	□□□□□ -1.75
API2	YDR525W	BUD7	Q08754	746 aa		4.14	□□□□□ -1.75
API2	YDR525W	VPS68	Q12016	184 aa		4.14	□□□□□ -1.75
API2	YDR525W	TGL5	Q12043	749 aa		4.14	□□□□□ -1.75
API2	YDR525W	ICT1	Q12385	394 aa		4.14	□□□□□ -1.75
API2	YDR525W	SEC53	P07283	254 aa	Known RBP	4.13	□□□□□ -1.75
API2	YDR525W	FUM1	P08417	488 aa	Known RBP	4.13	□□□□□ -1.75
API2	YDR525W	YKR104W	P0CE69	306 aa		4.13	□□□□□ -1.75
API2	YDR525W	SRV2	P17555	526 aa	Known RBP	4.13	□□□□□ -1.75
API2	YDR525W	VPS34	P22543	875 aa		4.13	□□□□□ -1.75
API2	YDR525W	TRX2	P22803	104 aa	Known RBP	4.13	□□□□□ -1.75
API2	YDR525W	TIP20	P33891	701 aa		4.13	□□□□□ -1.75
API2	YDR525W	STB6	P36085	766 aa		4.13	□□□□□ -1.75
API2	YDR525W	GMH1	P36125	273 aa		4.13	□□□□□ -1.75
API2	YDR525W	UTH1	P36135	365 aa		4.13	□□□□□ -1.75
API2	YDR525W	MAK5	P38112	773 aa	Predicted RBP	4.13	□□□□□ -1.75
API2	YDR525W	PCL5	P38794	229 aa		4.13	□□□□□ -1.75
API2	YDR525W	YHR182W	P38870	785 aa		4.13	□□□□□ -1.75
API2	YDR525W	STN1	P38960	494 aa		4.13	□□□□□ -1.75
API2	YDR525W	HAT2	P39984	401 aa		4.13	□□□□□ -1.75
API2	YDR525W	PEP8	P40335	379 aa		4.13	□□□□□ -1.75
API2	YDR525W	YJL070C	P40361	888 aa		4.13	□□□□□ -1.75
API2	YDR525W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
API2	YDR525W	STB2	P46679	850 aa		4.13	□□□□□ -1.75
API2	YDR525W	YJL049W	P47048	450 aa		4.13	□□□□□ -1.75
API2	YDR525W	LIA1	P47120	325 aa	Known RBP	4.13	□□□□□ -1.75
API2	YDR525W	TIS11	P47977	285 aa		4.13	□□□□□ -1.75
API2	YDR525W	YGL108C	P53139	140 aa		4.13	□□□□□ -1.75
API2	YDR525W	ERP6	P53198	216 aa		4.13	□□□□□ -1.75
API2	YDR525W	OSH6	Q02201	448 aa		4.13	□□□□□ -1.75
API2	YDR525W	YLR177W	Q06251	628 aa		4.13	□□□□□ -1.75
API2	YDR525W	YLR053C	Q12026	108 aa		4.13	□□□□□ -1.75
API2	YDR525W	NCA2	Q12374	616 aa		4.13	□□□□□ -1.75
API2	YDR525W	RGS2	Q99188	309 aa		4.13	□□□□□ -1.75
API2	YDR525W	POL2	P21951	2222 aa	Known RBP	4.12	□□□□□ -1.75
API2	YDR525W	YPR089W	O13585	888 aa		4.12	□□□□□ -1.75
API2	YDR525W	ABF1	P14164	731 aa		4.12	□□□□□ -1.75
API2	YDR525W	SNT1	P25357	1226 aa		4.12	□□□□□ -1.75
API2	YDR525W	PHA2	P32452	334 aa		4.12	□□□□□ -1.75
API2	YDR525W	PRP18	P33411	251 aa	Predicted RBP	4.12	□□□□□ -1.75
API2	YDR525W	RRP14	P36080	434 aa	Known RBP	4.12	□□□□□ -1.75
API2	YDR525W	MRPL37	P36532	105 aa		4.12	□□□□□ -1.75
API2	YDR525W	SOL2	P37262	315 aa		4.12	□□□□□ -1.75
API2	YDR525W	YHR020W	P38708	688 aa	Known RBP	4.12	□□□□□ -1.75
API2	YDR525W	REV7	P38927	245 aa		4.12	□□□□□ -1.75
API2	YDR525W	MBP1	P39678	833 aa		4.12	□□□□□ -1.75
API2	YDR525W	OAF1	P39720	1047 aa	Predicted RBP	4.12	□□□□□ -1.75
API2	YDR525W	SIT1	P39980	628 aa		4.12	□□□□□ -1.75
API2	YDR525W	SPF1	P39986	1215 aa	Known RBP	4.12	□□□□□ -1.75
API2	YDR525W	HOS4	P40480	1083 aa		4.12	□□□□□ -1.75
API2	YDR525W	GCD14	P46959	383 aa	Predicted RBP	4.12	□□□□□ -1.75
API2	YDR525W	PAN2	P53010	1115 aa	Predicted RBP	4.12	□□□□□ -1.75
API2	YDR525W	BOL2	P53082	120 aa		4.12	□□□□□ -1.75
API2	YDR525W	RCF2	P53721	224 aa		4.12	□□□□□ -1.75
API2	YDR525W	SWS2	P53937	143 aa		4.12	□□□□□ -1.75
API2	YDR525W	TGL2	P54857	326 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 38 ms