RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A BUG1Q12191 341 aa-0.06□□□□□ -2.42
TFB5YDR079C-A DBP10Q12389 995 aaKnown RBP-0.06□□□□□ -2.42
TFB5YDR079C-A RRD2Q12461 358 aa-0.06□□□□□ -2.42
TFB5YDR079C-A VPS15P22219 1454 aa-0.06□□□□□ -2.42
TFB5YDR079C-A GSC2P40989 1895 aa-0.06□□□□□ -2.42
TFB5YDR079C-A NUP145P49687 1317 aa-0.07□□□□□ -2.42
TFB5YDR079C-A ESC1Q03661 1658 aaKnown RBP-0.07□□□□□ -2.42
TFB5YDR079C-A SCC2Q04002 1493 aa-0.07□□□□□ -2.42
TFB5YDR079C-A CAR1P00812 333 aaKnown RBP-0.07□□□□□ -2.42
TFB5YDR079C-A PAB1P04147 577 aaKnown RBP RIP-Chip data-0.07□□□□□ -2.42 RIP-Chip
TFB5YDR079C-A RPS14AP06367 137 aaKnown RBP-0.07□□□□□ -2.42
TFB5YDR079C-A POX1P13711 748 aa-0.07□□□□□ -2.42
TFB5YDR079C-A CTA1P15202 515 aa-0.07□□□□□ -2.42
TFB5YDR079C-A HPR1P17629 752 aaKnown RBP-0.07□□□□□ -2.42
TFB5YDR079C-A DBF2P22204 572 aa-0.07□□□□□ -2.42
TFB5YDR079C-A CPR4P25334 318 aa-0.07□□□□□ -2.42
TFB5YDR079C-A POT1P27796 417 aaKnown RBP RIP-Chip data-0.07□□□□□ -2.42not detected
TFB5YDR079C-A YME2P32843 850 aa-0.07□□□□□ -2.42
TFB5YDR079C-A CSE1P33307 960 aa-0.07□□□□□ -2.42
TFB5YDR079C-A SOL2P37262 315 aa-0.07□□□□□ -2.42
TFB5YDR079C-A HEK2P38199 381 aaKnown RBP RIP-Chip data-0.07□□□□□ -2.42not detected
TFB5YDR079C-A PFF1P38244 976 aa-0.07□□□□□ -2.42
TFB5YDR079C-A ICS2P38284 255 aa-0.07□□□□□ -2.42
TFB5YDR079C-A TIM17P39515 158 aa-0.07□□□□□ -2.42
TFB5YDR079C-A RPS14BP39516 138 aaKnown RBP-0.07□□□□□ -2.42
TFB5YDR079C-A MMF1P40185 145 aaKnown RBP-0.07□□□□□ -2.42
TFB5YDR079C-A YJR120WP47157 116 aa-0.07□□□□□ -2.42
TFB5YDR079C-A MAL12P53341 584 aa-0.07□□□□□ -2.42
TFB5YDR079C-A NRM1P53718 249 aa-0.07□□□□□ -2.42
TFB5YDR079C-A DUG3P53871 357 aa-0.07□□□□□ -2.42
TFB5YDR079C-A GIP3Q03016 1276 aa-0.07□□□□□ -2.42
TFB5YDR079C-A IRC4Q03036 179 aa-0.07□□□□□ -2.42
TFB5YDR079C-A YDR541CQ03049 344 aa-0.07□□□□□ -2.42
TFB5YDR079C-A YMR160WQ03823 816 aa-0.07□□□□□ -2.42
TFB5YDR079C-A TRI1Q05024 226 aa-0.07□□□□□ -2.42
TFB5YDR079C-A PIN3Q06449 215 aa-0.07□□□□□ -2.42
TFB5YDR079C-A YTM1Q12024 460 aaPredicted RBP-0.07□□□□□ -2.42
TFB5YDR079C-A MPD2Q99316 277 aa-0.07□□□□□ -2.42
TFB5YDR079C-A ARO1P08566 1588 aaKnown RBP-0.07□□□□□ -2.42
TFB5YDR079C-A ATG2P53855 1592 aa-0.07□□□□□ -2.42
TFB5YDR079C-A NUP157P40064 1391 aaKnown RBP-0.07□□□□□ -2.42
TFB5YDR079C-A YLL066CQ99208 1374 aa-0.07□□□□□ -2.42
TFB5YDR079C-A STU1P38198 1513 aa-0.08□□□□□ -2.42
TFB5YDR079C-A SNF1P06782 633 aaKnown RBP-0.08□□□□□ -2.42
TFB5YDR079C-A APE1P14904 514 aa-0.08□□□□□ -2.42
TFB5YDR079C-A AMD1P15274 810 aaKnown RBP-0.08□□□□□ -2.42
TFB5YDR079C-A SEN2P16658 377 aa-0.08□□□□□ -2.42
TFB5YDR079C-A CLC1P17891 233 aa-0.08□□□□□ -2.42
TFB5YDR079C-A SRP54P20424 541 aaKnown RBP-0.08□□□□□ -2.42
TFB5YDR079C-A DAL82P21705 255 aa-0.08□□□□□ -2.42
TFB5YDR079C-A GRR1P24814 1151 aa-0.08□□□□□ -2.42
TFB5YDR079C-A LCB1P25045 558 aaKnown RBP-0.08□□□□□ -2.42
TFB5YDR079C-A ADH7P25377 361 aa-0.08□□□□□ -2.42
TFB5YDR079C-A BEM1P29366 551 aa-0.08□□□□□ -2.42
TFB5YDR079C-A SNC1P31109 117 aa-0.08□□□□□ -2.42
TFB5YDR079C-A SMY1P32364 656 aaKnown RBP-0.08□□□□□ -2.42
TFB5YDR079C-A HIR2P32480 875 aa-0.08□□□□□ -2.42
TFB5YDR079C-A ESL2P36168 1195 aa-0.08□□□□□ -2.42
TFB5YDR079C-A MAL32P38158 584 aa-0.08□□□□□ -2.42
TFB5YDR079C-A VHC1P38329 1120 aa-0.08□□□□□ -2.42
TFB5YDR079C-A SIP3P38717 1229 aa-0.08□□□□□ -2.42
TFB5YDR079C-A TDA11P38854 504 aa-0.08□□□□□ -2.42
TFB5YDR079C-A YDR089WP38966 869 aa-0.08□□□□□ -2.42
TFB5YDR079C-A PAN6P40459 309 aa-0.08□□□□□ -2.42
TFB5YDR079C-A YHC3P47040 408 aa-0.08□□□□□ -2.42
TFB5YDR079C-A MRX6P48564 524 aa-0.08□□□□□ -2.42
TFB5YDR079C-A VPS4P52917 437 aa-0.08□□□□□ -2.42
TFB5YDR079C-A CAF40P53829 373 aa-0.08□□□□□ -2.42
TFB5YDR079C-A TRM44Q02648 567 aaKnown RBP-0.08□□□□□ -2.42
TFB5YDR079C-A ERO1Q03103 563 aa-0.08□□□□□ -2.42
TFB5YDR079C-A MTQ2Q03920 221 aaPredicted RBP-0.08□□□□□ -2.42
TFB5YDR079C-A EIS1Q05050 843 aaKnown RBP-0.08□□□□□ -2.42
TFB5YDR079C-A PEX10Q05568 337 aa-0.08□□□□□ -2.42
TFB5YDR079C-A DIC1Q06143 298 aa-0.08□□□□□ -2.42
TFB5YDR079C-A HIM1Q06674 414 aa-0.08□□□□□ -2.42
TFB5YDR079C-A CSR1Q06705 408 aaKnown RBP-0.08□□□□□ -2.42
TFB5YDR079C-A MFG1Q07684 458 aa-0.08□□□□□ -2.42
TFB5YDR079C-A CFT2Q12102 859 aaPredicted RBP-0.08□□□□□ -2.42
TFB5YDR079C-A HUA2Q12134 243 aa-0.08□□□□□ -2.42
TFB5YDR079C-A PKH2Q12236 1081 aaKnown RBP-0.08□□□□□ -2.42
TFB5YDR079C-A RUP1Q12242 671 aa-0.08□□□□□ -2.42
TFB5YDR079C-A GRX6Q12438 231 aa-0.08□□□□□ -2.42
TFB5YDR079C-A TRM3Q07527 1436 aa-0.08□□□□□ -2.42
TFB5YDR079C-A FLO11P08640 1367 aa-0.08□□□□□ -2.42
TFB5YDR079C-A KRE5P22023 1365 aa-0.08□□□□□ -2.42
TFB5YDR079C-A BUD3P25558 1636 aa-0.09□□□□□ -2.42
TFB5YDR079C-A SPT6P23615 1451 aaKnown RBP-0.09□□□□□ -2.42
TFB5YDR079C-A MYO4P32492 1471 aa-0.09□□□□□ -2.42
TFB5YDR079C-A NUP159P40477 1460 aa-0.09□□□□□ -2.42
TFB5YDR079C-A MMS22Q06164 1454 aa-0.09□□□□□ -2.42
TFB5YDR079C-A IQG1Q12280 1495 aa-0.09□□□□□ -2.42
TFB5YDR079C-A ADR1P07248 1323 aa-0.09□□□□□ -2.42
TFB5YDR079C-A TY1B-NL2Q99337 1749 aaKnown RBP-0.09□□□□□ -2.42
TFB5YDR079C-A YLR419WQ06698 1435 aaKnown RBP-0.09□□□□□ -2.42
TFB5YDR079C-A BIK1P11709 440 aa-0.09□□□□□ -2.42
TFB5YDR079C-A CIN8P27895 1000 aa-0.09□□□□□ -2.42
TFB5YDR079C-A RPB9P27999 122 aa-0.09□□□□□ -2.42
TFB5YDR079C-A MSK1P32048 576 aa-0.09□□□□□ -2.42
TFB5YDR079C-A AFG1P32317 509 aa-0.09□□□□□ -2.42
TFB5YDR079C-A UBC6P33296 250 aaPredicted RBP-0.09□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms