RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W MNN1P39106 762 aa4.56□□□□□ -1.68
VHC1YBR235W ALG8P40351 577 aa4.56□□□□□ -1.68
VHC1YBR235W AMA1P50082 593 aa4.56□□□□□ -1.68
VHC1YBR235W TAF4P50105 388 aa4.56□□□□□ -1.68
VHC1YBR235W MLC1P53141 149 aa4.56□□□□□ -1.68
VHC1YBR235W PRP42Q03776 544 aaKnown RBP4.56□□□□□ -1.68
VHC1YBR235W SEN15Q04675 128 aa4.56□□□□□ -1.68
VHC1YBR235W BUR2Q05949 395 aa4.56□□□□□ -1.68
VHC1YBR235W SAM4Q08985 325 aaKnown RBP4.56□□□□□ -1.68
VHC1YBR235W PUS9Q12069 462 aa4.56□□□□□ -1.68
VHC1YBR235W YDR061WQ12298 539 aa4.56□□□□□ -1.68
VHC1YBR235W UBR1P19812 1950 aa4.56□□□□□ -1.68
VHC1YBR235W YRF1-1P0CX20 1796 aa4.55□□□□□ -1.68
VHC1YBR235W YRF1-5P0CX21 1796 aa4.55□□□□□ -1.68
VHC1YBR235W YRF1-8P0CX22 1796 aa4.55□□□□□ -1.68
VHC1YBR235W SNF3P10870 884 aa4.55□□□□□ -1.68
VHC1YBR235W MAS2P11914 482 aa4.55□□□□□ -1.68
VHC1YBR235W YPK2P18961 677 aa4.55□□□□□ -1.68
VHC1YBR235W SCM4P32564 187 aa4.55□□□□□ -1.68
VHC1YBR235W SRP102P36057 244 aaPredicted RBP4.55□□□□□ -1.68
VHC1YBR235W MSC7P38694 644 aa4.55□□□□□ -1.68
VHC1YBR235W YHR131CP38835 850 aa4.55□□□□□ -1.68
VHC1YBR235W HRB1P38922 454 aaKnown RBP RIP-Chip data4.55□□□□□ -1.68not detected
VHC1YBR235W DUN1P39009 513 aa4.55□□□□□ -1.68
VHC1YBR235W FAU1P40099 211 aa4.55□□□□□ -1.68
VHC1YBR235W UFE1P41834 346 aa4.55□□□□□ -1.68
VHC1YBR235W PSA1P41940 361 aaKnown RBP4.55□□□□□ -1.68
VHC1YBR235W LSB6P42951 607 aa4.55□□□□□ -1.68
VHC1YBR235W JHD2P47156 728 aaPredicted RBP4.55□□□□□ -1.68
VHC1YBR235W GTO1P48239 356 aa4.55□□□□□ -1.68
VHC1YBR235W ESA1Q08649 445 aa4.55□□□□□ -1.68
VHC1YBR235W FUR4P05316 633 aaKnown RBP4.55□□□□□ -1.68
VHC1YBR235W FBP1P09201 348 aa4.55□□□□□ -1.68
VHC1YBR235W ENA1P13587 1091 aa4.55□□□□□ -1.68
VHC1YBR235W APA2P22108 325 aa4.55□□□□□ -1.68
VHC1YBR235W GIT1P25346 518 aa4.55□□□□□ -1.68
VHC1YBR235W HEM12P32347 362 aaPredicted RBP4.55□□□□□ -1.68
VHC1YBR235W ATP11P32453 318 aa4.55□□□□□ -1.68
VHC1YBR235W PRP21P32524 280 aaPredicted RBP4.55□□□□□ -1.68
VHC1YBR235W MSS1P32559 526 aaPredicted RBP4.55□□□□□ -1.68
VHC1YBR235W PCS60P38137 543 aaKnown RBP RIP-Chip data4.55□□□□□ -1.68not detected
VHC1YBR235W VHC1P38329 1120 aa4.55□□□□□ -1.68
VHC1YBR235W TGL3P40308 642 aa4.55□□□□□ -1.68
VHC1YBR235W PFA3P42836 336 aa4.55□□□□□ -1.68
VHC1YBR235W YJL043WP47053 257 aa4.55□□□□□ -1.68
VHC1YBR235W PMT5P52867 743 aa4.55□□□□□ -1.68
VHC1YBR235W ENA2Q01896 1091 aa4.55□□□□□ -1.68
VHC1YBR235W CSN9Q03981 162 aa4.55□□□□□ -1.68
VHC1YBR235W GAD1Q04792 585 aa4.55□□□□□ -1.68
VHC1YBR235W UTP21Q06078 939 aaPredicted RBP4.55□□□□□ -1.68
VHC1YBR235W OPT2Q06593 877 aa4.55□□□□□ -1.68
VHC1YBR235W TRE2Q08693 809 aa4.55□□□□□ -1.68
VHC1YBR235W SNX3Q08826 162 aaKnown RBP4.55□□□□□ -1.68
VHC1YBR235W RRP42Q12277 265 aaPredicted RBP4.55□□□□□ -1.68
VHC1YBR235W RRI2Q12348 645 aa4.55□□□□□ -1.68
VHC1YBR235W MMP1Q12372 583 aa4.55□□□□□ -1.68
VHC1YBR235W ENA5Q12691 1091 aa4.55□□□□□ -1.68
VHC1YBR235W NUP188P52593 1655 aaKnown RBP4.55□□□□□ -1.68
VHC1YBR235W BI2P03873 423 aa4.54□□□□□ -1.68
VHC1YBR235W RAD10P06838 210 aa4.54□□□□□ -1.68
VHC1YBR235W DFR1P07807 211 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
VHC1YBR235W BAR1P12630 587 aa4.54□□□□□ -1.68
VHC1YBR235W DAL81P21657 970 aa4.54□□□□□ -1.68
VHC1YBR235W SIP1P32578 815 aa4.54□□□□□ -1.68
VHC1YBR235W FRE1P32791 686 aa4.54□□□□□ -1.68
VHC1YBR235W LST4P34239 828 aa4.54□□□□□ -1.68
VHC1YBR235W YNK1P36010 153 aaKnown RBP4.54□□□□□ -1.68
VHC1YBR235W OSH7P38755 437 aa4.54□□□□□ -1.68
VHC1YBR235W YHK8P38776 514 aa4.54□□□□□ -1.68
VHC1YBR235W UBP9P39967 754 aa4.54□□□□□ -1.68
VHC1YBR235W KRE29P40026 464 aa4.54□□□□□ -1.68
VHC1YBR235W NSE4P43124 402 aa4.54□□□□□ -1.68
VHC1YBR235W NOP19P53317 196 aaPredicted RBP4.54□□□□□ -1.68
VHC1YBR235W BIO4P53630 237 aa4.54□□□□□ -1.68
VHC1YBR235W ECM23Q02710 187 aa4.54□□□□□ -1.68
VHC1YBR235W SHR3Q02774 210 aa4.54□□□□□ -1.68
VHC1YBR235W YMR187CQ03236 431 aa4.54□□□□□ -1.68
VHC1YBR235W ATG16Q03818 150 aa4.54□□□□□ -1.68
VHC1YBR235W ATP2P00830 511 aaKnown RBP4.54□□□□□ -1.68
VHC1YBR235W RPL25P04456 142 aaKnown RBP4.54□□□□□ -1.68
VHC1YBR235W AAC1P04710 309 aa4.54□□□□□ -1.68
VHC1YBR235W SFP1P32432 683 aa4.54□□□□□ -1.68
VHC1YBR235W GSH1P32477 678 aa4.54□□□□□ -1.68
VHC1YBR235W PGM1P33401 570 aaKnown RBP4.54□□□□□ -1.68
VHC1YBR235W PTC1P35182 281 aa4.54□□□□□ -1.68
VHC1YBR235W IPI1P38803 334 aaPredicted RBP4.54□□□□□ -1.68
VHC1YBR235W YHR182WP38870 785 aa4.54□□□□□ -1.68
VHC1YBR235W CPR7P47103 393 aa4.54□□□□□ -1.68
VHC1YBR235W GTF1P53260 183 aaPredicted RBP4.54□□□□□ -1.68
VHC1YBR235W HED1Q03937 162 aa4.54□□□□□ -1.68
VHC1YBR235W ECM7Q06200 448 aa4.54□□□□□ -1.68
VHC1YBR235W YPR014CQ6B0W2 109 aa4.54□□□□□ -1.68
VHC1YBR235W RAM1P22007 431 aa4.54□□□□□ -1.68
VHC1YBR235W CAM1P29547 415 aaKnown RBP4.54□□□□□ -1.68
VHC1YBR235W ATP7P30902 174 aa4.54□□□□□ -1.68
VHC1YBR235W CDC12P32468 407 aaKnown RBP4.54□□□□□ -1.68
VHC1YBR235W YKL133CP36066 463 aa4.54□□□□□ -1.68
VHC1YBR235W SSH1P38353 490 aaKnown RBP4.54□□□□□ -1.68
VHC1YBR235W EXO1P39875 702 aa4.54□□□□□ -1.68
VHC1YBR235W IES5P40060 125 aa4.54□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms