RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 FAM71BQ8TC56 605 aa15.44■□□□□ 0.06
PHGDH-233ENST00000642021 NOC3LQ8WTT2 800 aaKnown RBP15.44■□□□□ 0.06
PHGDH-233ENST00000642021 C7orf25Q9BPX7 421 aa15.44■□□□□ 0.06
PHGDH-233ENST00000642021 SLC39A2Q9NP94 309 aa15.44■□□□□ 0.06
PHGDH-233ENST00000642021 ZC3H4Q9UPT8 1303 aaKnown RBP15.43■□□□□ 0.06
PHGDH-233ENST00000642021 SMCO2A6NFE2 343 aa15.43■□□□□ 0.06
PHGDH-233ENST00000642021 LDHBP07195 334 aaKnown RBP15.43■□□□□ 0.06
PHGDH-233ENST00000642021 NAPAP54920 295 aa15.43■□□□□ 0.06
PHGDH-233ENST00000642021 USP17L2Q6R6M4 530 aa15.43■□□□□ 0.06
PHGDH-233ENST00000642021 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-233ENST00000642021 ZSCAN29Q8IWY8 852 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-233ENST00000642021 SMARCC1Q92922 1105 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-233ENST00000642021 GPR101Q96P66 508 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-233ENST00000642021 PURBQ96QR8 312 aaKnown RBP15.43■□□□□ 0.06
PHGDH-233ENST00000642021 NUP58Q9BVL2 599 aa15.43■□□□□ 0.06
PHGDH-233ENST00000642021 VAT1LQ9HCJ6 419 aa15.43■□□□□ 0.06
PHGDH-233ENST00000642021 ZNHIT6Q9NWK9 470 aaKnown RBP15.43■□□□□ 0.06
PHGDH-233ENST00000642021 LRWD1Q9UFC0 647 aa15.43■□□□□ 0.06
PHGDH-233ENST00000642021 FEZ2Q9UHY8 353 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-233ENST00000642021 HSP90B2PQ58FF3 399 aa15.43■□□□□ 0.06
PHGDH-233ENST00000642021 SETDB2Q96T68 719 aa15.43■□□□□ 0.06
PHGDH-233ENST00000642021 FAM204AQ9H8W3 233 aa15.43■□□□□ 0.06
PHGDH-233ENST00000642021 THRAP3Q9Y2W1 955 aaKnown RBP15.43■□□□□ 0.06
PHGDH-233ENST00000642021 LAMB1P07942 1786 aa15.43■□□□□ 0.06
PHGDH-233ENST00000642021 ERCC3P19447 782 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 CCDC170Q8IYT3 715 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 RETREG2Q8NC44 543 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 ERGIC2Q96RQ1 377 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 JADE2Q9NQC1 790 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 HPCAL4Q9UM19 191 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 TRIM66O15016 1216 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 IDEP14735 1019 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 TNNT3P45378 269 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-233ENST00000642021 C2orf54Q08AI8 447 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 NONOQ15233 471 aaKnown RBP eCLIP15.42■□□□□ 0.06
PHGDH-233ENST00000642021 SPTY2D1Q68D10 685 aaPredicted RBP15.42■□□□□ 0.06
PHGDH-233ENST00000642021 AMIGO3Q86WK7 504 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 AK8Q96MA6 479 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 CUEDC2Q9H467 287 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 ARHGAP20Q9P2F6 1191 aa15.42■□□□□ 0.06
PHGDH-233ENST00000642021 BICDL2A1A5D9 508 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 RNF40O75150 1001 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 TBCKQ8TEA7 893 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 TMEM260Q9NX78 707 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 BIN2Q9UBW5 565 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-233ENST00000642021 CAPN6Q9Y6Q1 641 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 NUTM2BA6NNL0 878 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-233ENST00000642021 NUTM2EB1AL46 878 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-233ENST00000642021 PRPF6O94906 941 aaKnown RBP15.41■□□□□ 0.06
PHGDH-233ENST00000642021 VAV2P52735 878 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 MRPS25P82663 173 aaKnown RBP15.41■□□□□ 0.06
PHGDH-233ENST00000642021 TMED8Q6PL24 325 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-233ENST00000642021 NEK8Q86SG6 692 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 CCDC42Q96M95 316 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 UBA5Q9GZZ9 404 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 MLXIPQ9HAP2 919 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 MED4Q9NPJ6 270 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 FAM207AQ9NSI2 230 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-233ENST00000642021 BLOC1S4Q9NUP1 217 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 ROBO3Q96MS0 1386 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 TXKP42681 527 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 AARSP49588 968 aaKnown RBP eCLIP15.41■□□□□ 0.06
PHGDH-233ENST00000642021 KIF5AQ12840 1032 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 SEMA3FQ13275 785 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 EZH2Q15910 746 aaKnown RBP15.41■□□□□ 0.06
PHGDH-233ENST00000642021 CCNI2Q6ZMN8 369 aaPredicted RBP15.41■□□□□ 0.06
PHGDH-233ENST00000642021 KRT25Q7Z3Z0 450 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 CREG2Q8IUH2 290 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 EHBP1Q8NDI1 1231 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 COG1Q8WTW3 980 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 HDAC7Q8WUI4 952 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 PIGSQ96S52 555 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 VIPAS39Q9H9C1 493 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 PLAGL2Q9UPG8 496 aa15.41■□□□□ 0.06
PHGDH-233ENST00000642021 TARSL2A2RTX5 802 aaKnown RBP15.4■□□□□ 0.06
PHGDH-233ENST00000642021 MYMKA6NI61 221 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 EDIL3O43854 480 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 IPO7O95373 1038 aaKnown RBP15.4■□□□□ 0.06
PHGDH-233ENST00000642021 NFIXQ14938 502 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 FIGNQ5HY92 759 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 CENPPQ6IPU0 288 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 LEKR1Q6ZMV7 388 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 C2CD5Q86YS7 1000 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 CERS3Q8IU89 383 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 CAGE1Q8TC20 777 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 DRC1Q96MC2 740 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 SPZ1Q9BXG8 430 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 MAGEF1Q9HAY2 307 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 ANKIB1Q9P2G1 1089 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 NARFQ9UHQ1 456 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 SIK3Q9Y2K2 1263 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 WNK3Q9BYP7 1800 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 AGPSO00116 658 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 MYO1CO00159 1063 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 CDK8P49336 464 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 GRB10Q13322 594 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 LRRC31Q6UY01 552 aa15.4■□□□□ 0.06
PHGDH-233ENST00000642021 DYMQ7RTS9 669 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms