RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 KRT32Q14532 448 aa17.46■□□□□ 0.39
PHGDH-231ENST00000641939 SLC35G1Q2M3R5 365 aa17.46■□□□□ 0.39
PHGDH-231ENST00000641939 EEPD1Q7L9B9 569 aa17.46■□□□□ 0.39
PHGDH-231ENST00000641939 HOMER1Q86YM7 354 aa17.46■□□□□ 0.39
PHGDH-231ENST00000641939 FBXO16Q8IX29 292 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-231ENST00000641939 KLHDC9Q8NEP7 349 aa17.46■□□□□ 0.39
PHGDH-231ENST00000641939 FERMT2Q96AC1 680 aa17.46■□□□□ 0.39
PHGDH-231ENST00000641939 MPHOSPH6Q99547 160 aaKnown RBP17.46■□□□□ 0.39
PHGDH-231ENST00000641939 TSEN34Q9BSV6 310 aaKnown RBP17.46■□□□□ 0.39
PHGDH-231ENST00000641939 LRRC2Q9BYS8 371 aa17.46■□□□□ 0.39
PHGDH-231ENST00000641939 UPF3AQ9H1J1 476 aaKnown RBP17.46■□□□□ 0.39
PHGDH-231ENST00000641939 SPC25Q9HBM1 224 aa17.46■□□□□ 0.39
PHGDH-231ENST00000641939 KIAA1217Q5T5P2 1943 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-231ENST00000641939 CYTH3O43739 400 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 PPP1R11O60927 126 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-231ENST00000641939 REC8O95072 547 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 CST5P28325 142 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-231ENST00000641939 GJA9P57773 515 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 TRAF1Q13077 416 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 ADCK5Q3MIX3 580 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 IQSEC1Q6DN90 963 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 TAPT1Q6NXT6 567 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 SLC39A5Q6ZMH5 540 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 TBC1D5Q92609 795 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 PIGSQ96S52 555 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 PDGFCQ9NRA1 345 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 COLQQ9Y215 455 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-231ENST00000641939 PCDHA1Q9Y5I3 950 aa17.45■□□□□ 0.38
PHGDH-231ENST00000641939 PNMA6FA0A0J9YX94 578 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 MYADML2A6NDP7 307 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 B4DLN1 442 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 C6orf222P0C671 652 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-231ENST00000641939 CALM1P0DP23 149 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 CALM2P0DP24 149 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 CALM3P0DP25 149 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 GNAQP50148 359 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 MRPL12P52815 198 aaKnown RBP17.44■□□□□ 0.38
PHGDH-231ENST00000641939 RTP1P59025 263 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 EXOSC10Q01780 885 aaKnown RBP17.44■□□□□ 0.38
PHGDH-231ENST00000641939 PDE4DQ08499 809 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 CHRDL2Q6WN34 429 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 NOL8Q76FK4 1167 aaKnown RBP17.44■□□□□ 0.38
PHGDH-231ENST00000641939 DHX32Q7L7V1 743 aaKnown RBP17.44■□□□□ 0.38
PHGDH-231ENST00000641939 SGMS1Q86VZ5 419 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 SYTL5Q8TDW5 730 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-231ENST00000641939 KCNB2Q92953 911 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 LZTS2Q9BRK4 669 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 SPZ1Q9BXG8 430 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 ZMYND8Q9ULU4 1186 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-231ENST00000641939 GNEQ9Y223 722 aaKnown RBP17.44■□□□□ 0.38
PHGDH-231ENST00000641939 SLC12A7Q9Y666 1083 aa17.44■□□□□ 0.38
PHGDH-231ENST00000641939 MOXD2PA6NHM9 499 aa17.43■□□□□ 0.38
PHGDH-231ENST00000641939 SMPD1P17405 629 aa17.43■□□□□ 0.38
PHGDH-231ENST00000641939 SYN1P17600 705 aa17.43■□□□□ 0.38
PHGDH-231ENST00000641939 EDNRBP24530 442 aa17.43■□□□□ 0.38
PHGDH-231ENST00000641939 SMARCA1P28370 1054 aa17.43■□□□□ 0.38
PHGDH-231ENST00000641939 ACLYP53396 1101 aa17.43■□□□□ 0.38
PHGDH-231ENST00000641939 SNX17Q15036 470 aa17.43■□□□□ 0.38
PHGDH-231ENST00000641939 KCNA10Q16322 511 aa17.43■□□□□ 0.38
PHGDH-231ENST00000641939 C1orf53Q5VUE5 145 aa17.43■□□□□ 0.38
PHGDH-231ENST00000641939 CCSAPQ6IQ19 270 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-231ENST00000641939 TLK2Q86UE8 772 aa17.43■□□□□ 0.38
PHGDH-231ENST00000641939 PCSK9Q8NBP7 692 aaKnown RBP17.43■□□□□ 0.38
PHGDH-231ENST00000641939 NSUN6Q8TEA1 469 aaKnown RBP17.43■□□□□ 0.38
PHGDH-231ENST00000641939 ATP11BQ9Y2G3 1177 aa17.43■□□□□ 0.38
PHGDH-231ENST00000641939 A0A1W2PQ45 241 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-231ENST00000641939 A0A1W2PQY0 241 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 RBM47A0AV96 593 aaKnown RBP17.42■□□□□ 0.38
PHGDH-231ENST00000641939 OPLAHO14841 1288 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 CFBP00751 764 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 HMGB1P09429 215 aaKnown RBP17.42■□□□□ 0.38
PHGDH-231ENST00000641939 RXRAP19793 462 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 HSPA4P34932 840 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 IRX5P78411 483 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-231ENST00000641939 GHRHRQ02643 423 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 HABP4Q5JVS0 413 aaKnown RBP17.42■□□□□ 0.38
PHGDH-231ENST00000641939 GNASQ5JWF2 1037 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 SAMD3Q8N6K7 520 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 TCEANC2Q96MN5 208 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 TAAR1Q96RJ0 339 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 RMDN3Q96TC7 470 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 AP5M1Q9H0R1 490 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 MAP3K20Q9NYL2 800 aaKnown RBP17.42■□□□□ 0.38
PHGDH-231ENST00000641939 COL20A1Q9P218 1284 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 Q9Y3F1 56 aa17.42■□□□□ 0.38
PHGDH-231ENST00000641939 CTAGE5O15320 804 aa17.41■□□□□ 0.38
PHGDH-231ENST00000641939 HSD17B4P51659 736 aa17.41■□□□□ 0.38
PHGDH-231ENST00000641939 NKX3-2P78367 333 aa17.41■□□□□ 0.38
PHGDH-231ENST00000641939 TRIM60Q495X7 471 aa17.41■□□□□ 0.38
PHGDH-231ENST00000641939 DUSP28Q4G0W2 176 aa17.41■□□□□ 0.38
PHGDH-231ENST00000641939 SYNE3Q6ZMZ3 975 aa17.41■□□□□ 0.38
PHGDH-231ENST00000641939 PIBF1Q8WXW3 757 aa17.41■□□□□ 0.38
PHGDH-231ENST00000641939 RRP36Q96EU6 259 aaKnown RBP17.41■□□□□ 0.38
PHGDH-231ENST00000641939 WDR11Q9BZH6 1224 aa17.41■□□□□ 0.38
PHGDH-231ENST00000641939 SNX14Q9Y5W7 946 aa17.41■□□□□ 0.38
PHGDH-231ENST00000641939 DYNC1LI2O43237 492 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-231ENST00000641939 EPB41L2O43491 1005 aaKnown RBP17.4■□□□□ 0.38
PHGDH-231ENST00000641939 PLEKHA8P1O95397 391 aa17.4■□□□□ 0.38
PHGDH-231ENST00000641939 ASGR1P07306 291 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms