RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TXLNAP40222 546 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 IREB2P48200 963 aaKnown RBP10.03□□□□□ -0.8
PHGDH-219ENST00000641513 USP17L24Q0WX57 530 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 DHX8Q14562 1220 aaKnown RBP10.03□□□□□ -0.8
PHGDH-219ENST00000641513 USP17L6PQ6QN14 398 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 CNNM3Q8NE01 707 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 RASSF8Q8NHQ8 419 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 SYMPKQ92797 1274 aaKnown RBP10.03□□□□□ -0.8
PHGDH-219ENST00000641513 ERCC4Q92889 916 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-219ENST00000641513 L3MBTL3Q96JM7 780 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-219ENST00000641513 PRIMPOLQ96LW4 560 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 TIGD1Q96MW7 591 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 WDR18Q9BV38 432 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 RANBP17Q9H2T7 1088 aaKnown RBP10.03□□□□□ -0.8
PHGDH-219ENST00000641513 RPAP3Q9H6T3 665 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-219ENST00000641513 TMOD4Q9NZQ9 345 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 HOOK1Q9UJC3 728 aaKnown RBP10.03□□□□□ -0.8
PHGDH-219ENST00000641513 HPSEQ9Y251 543 aa10.03□□□□□ -0.8
PHGDH-219ENST00000641513 MORC2Q9Y6X9 1032 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-219ENST00000641513 SPDYE3A6NKU9 549 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 LAD1O00515 517 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 ZBED4O75132 1171 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 OR52Z1P0C646 297 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 VCAM1P19320 739 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 CLK2P49760 499 aaKnown RBP10.02□□□□□ -0.81
PHGDH-219ENST00000641513 HMGCS2P54868 508 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 BACE1P56817 501 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 MAP3K9P80192 1104 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 CALCRLQ16602 461 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 STX1AQ16623 288 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 ARL6IP4Q66PJ3 421 aaKnown RBP10.02□□□□□ -0.81
PHGDH-219ENST00000641513 KRBA2Q6ZNG9 492 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 USP49Q70CQ1 688 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 MTERF4Q7Z6M4 381 aaKnown RBP10.02□□□□□ -0.81
PHGDH-219ENST00000641513 FCHSD1Q86WN1 690 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 CEP57L1Q8IYX8 460 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 CPXCR1Q8N123 301 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 PRPF38AQ8NAV1 312 aaKnown RBP10.02□□□□□ -0.81
PHGDH-219ENST00000641513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.02□□□□□ -0.81
PHGDH-219ENST00000641513 DHX58Q96C10 678 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 CDCA5Q96FF9 252 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 CCDC34Q96HJ3 373 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 EPSTI1Q96J88 318 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 MAP7D2Q96T17 732 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 ANO3Q9BYT9 981 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 TMEM60Q9H2L4 133 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 EMILIN3Q9NT22 766 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 SERTAD1Q9UHV2 236 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 CCPG1Q9ULG6 757 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 MRPL11Q9Y3B7 192 aaKnown RBP10.02□□□□□ -0.81
PHGDH-219ENST00000641513 ABCB11O95342 1321 aa10.02□□□□□ -0.81
PHGDH-219ENST00000641513 LOC285556D6RIA3 1793 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 FAM237AA0A1B0GTK4 181 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 C19orf81C9J6K1 198 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 TDP2O95551 362 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 CFBP00751 764 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 HOXA13P31271 388 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-219ENST00000641513 LONP1P36776 959 aaKnown RBP10.01□□□□□ -0.81
PHGDH-219ENST00000641513 TXKP42681 527 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 AP3B2Q13367 1082 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 ORC2Q13416 577 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-219ENST00000641513 VGLL4Q14135 290 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 IL17AQ16552 155 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 TMEM266Q2M3C6 531 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 LONRF3Q496Y0 759 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 ANO6Q4KMQ2 910 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 NOL9Q5SY16 702 aaKnown RBP10.01□□□□□ -0.81
PHGDH-219ENST00000641513 MCTP2Q6DN12 878 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 LDHDQ86WU2 507 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 C4orf32Q8N8J7 132 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 ZC3H15Q8WU90 426 aaKnown RBP10.01□□□□□ -0.81
PHGDH-219ENST00000641513 NAP1L4Q99733 375 aaKnown RBP10.01□□□□□ -0.81
PHGDH-219ENST00000641513 BPIFA3Q9BQP9 254 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 TAF1DQ9H5J8 278 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-219ENST00000641513 KIAA1217Q5T5P2 1943 aa10.01□□□□□ -0.81
PHGDH-219ENST00000641513 GCOM1H8Y6P7 765 aaPredicted RBP10□□□□□ -0.81
PHGDH-219ENST00000641513 BIN1O00499 593 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 DYNC1I1O14576 645 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 MEIS2O14770 477 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 FOSP01100 380 aaPredicted RBP10□□□□□ -0.81
PHGDH-219ENST00000641513 POLR2MP0CAP2 368 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 ALAS1P13196 640 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 ZNF76P36508 570 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 PRPHP41219 470 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 UBA7P41226 1012 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 TECP42680 631 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 PNOCQ13519 176 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 KANK3Q6NY19 840 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 PNMA8AQ86V59 439 aaPredicted RBP10□□□□□ -0.81
PHGDH-219ENST00000641513 PLA2G4DQ86XP0 818 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 ELOA2Q8IYF1 753 aaPredicted RBP10□□□□□ -0.81
PHGDH-219ENST00000641513 MRFAP1L1Q96HT8 127 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 AGBL1Q96MI9 1066 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 DNAJC25Q9H1X3 360 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 EHMT1Q9H9B1 1298 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 ZNF408Q9H9D4 720 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 ELP3Q9H9T3 547 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 CBX8Q9HC52 389 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 RAVER2Q9HCJ3 691 aaKnown RBP10□□□□□ -0.81
PHGDH-219ENST00000641513 ANO10Q9NW15 660 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms