RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 SLC4A4Q9Y6R1 1079 aa11.62□□□□□ -0.55
PHGDH-212ENST00000641247 TRANK1O15050 2925 aa11.62□□□□□ -0.55
PHGDH-212ENST00000641247 SCN5AQ14524 2016 aa11.62□□□□□ -0.55
PHGDH-212ENST00000641247 FAM47CQ5HY64 1035 aa11.61□□□□□ -0.55
PHGDH-212ENST00000641247 RASGRP2Q7LDG7 609 aa11.61□□□□□ -0.55
PHGDH-212ENST00000641247 COPS5Q92905 334 aa11.61□□□□□ -0.55
PHGDH-212ENST00000641247 CEP95Q96GE4 821 aa11.61□□□□□ -0.55
PHGDH-212ENST00000641247 TRERF1Q96PN7 1200 aa11.61□□□□□ -0.55
PHGDH-212ENST00000641247 C17orf80Q9BSJ5 609 aa11.61□□□□□ -0.55
PHGDH-212ENST00000641247 KCNH6Q9H252 994 aa11.61□□□□□ -0.55
PHGDH-212ENST00000641247 FEM1BQ9UK73 627 aa11.61□□□□□ -0.55
PHGDH-212ENST00000641247 COG6Q9Y2V7 657 aa11.61□□□□□ -0.55
PHGDH-212ENST00000641247 RBM19Q9Y4C8 960 aaKnown RBP11.61□□□□□ -0.55
PHGDH-212ENST00000641247 CTDP1Q9Y5B0 961 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-212ENST00000641247 MCM3APO60318 1980 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 TMEM232C9JQI7 657 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 PITPNM1O00562 1244 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 IPO8O15397 1037 aaKnown RBP11.6□□□□□ -0.55
PHGDH-212ENST00000641247 NBNO60934 754 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 PRDM1O75626 825 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 BAIAP3O94812 1187 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 GJB5O95377 273 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 IRS1P35568 1242 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 ZP2Q05996 745 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 FAM117BQ6P1L5 589 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 CEP85Q6P2H3 762 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 RETREG2Q8NC44 543 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 RHPN1Q8TCX5 695 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 DHX38Q92620 1227 aaKnown RBP11.6□□□□□ -0.55
PHGDH-212ENST00000641247 TGS1Q96RS0 853 aaKnown RBP11.6□□□□□ -0.55
PHGDH-212ENST00000641247 MTG1Q9BT17 334 aaPredicted RBP11.6□□□□□ -0.55
PHGDH-212ENST00000641247 WDR11Q9BZH6 1224 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 BOLA2Q9H3K6 86 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 CYP39A1Q9NYL5 469 aa11.6□□□□□ -0.55
PHGDH-212ENST00000641247 COL4A4P53420 1690 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-212ENST00000641247 RBM47A0AV96 593 aaKnown RBP11.59□□□□□ -0.55
PHGDH-212ENST00000641247 RLBP1P12271 317 aa11.59□□□□□ -0.55
PHGDH-212ENST00000641247 BMP3P12645 472 aa11.59□□□□□ -0.55
PHGDH-212ENST00000641247 ALAS1P13196 640 aa11.59□□□□□ -0.55
PHGDH-212ENST00000641247 RRP1P56182 461 aaKnown RBP11.59□□□□□ -0.55
PHGDH-212ENST00000641247 SLFN13Q68D06 897 aa11.59□□□□□ -0.55
PHGDH-212ENST00000641247 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.59□□□□□ -0.55
PHGDH-212ENST00000641247 RAD9AQ99638 391 aa11.59□□□□□ -0.55
PHGDH-212ENST00000641247 ZBED2Q9BTP6 218 aa11.59□□□□□ -0.55
PHGDH-212ENST00000641247 ALG13Q9NP73 1137 aaKnown RBP11.59□□□□□ -0.55
PHGDH-212ENST00000641247 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
PHGDH-212ENST00000641247 MTMR4Q9NYA4 1195 aa11.59□□□□□ -0.55
PHGDH-212ENST00000641247 GSG1L2A8MUP6 293 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 MINDY4BA8MYZ0 360 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 CXCL10P02778 98 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 LTBRP36941 435 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 KCNJ6P48051 423 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 TCF15Q12870 199 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 SBK1Q52WX2 424 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 GDF6Q6KF10 455 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-212ENST00000641247 NFRKBQ6P4R8 1299 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 TRAF7Q6Q0C0 670 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 GMCL1P1Q8NEA9 526 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 OR6J1Q8NGC5 347 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 MKNK2Q9HBH9 465 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 VTA1Q9NP79 307 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 PAG1Q9NWQ8 432 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 MUTYHQ9UIF7 546 aa11.58□□□□□ -0.56
PHGDH-212ENST00000641247 TET1Q8NFU7 2136 aa11.57□□□□□ -0.56
PHGDH-212ENST00000641247 PTPRSQ13332 1948 aa11.57□□□□□ -0.56
PHGDH-212ENST00000641247 BRWD1Q9NSI6 2320 aa11.57□□□□□ -0.56
PHGDH-212ENST00000641247 DLX2Q07687 328 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-212ENST00000641247 BAATQ14032 418 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-212ENST00000641247 MBTPS1Q14703 1052 aa11.57□□□□□ -0.56
PHGDH-212ENST00000641247 COL19A1Q14993 1142 aa11.57□□□□□ -0.56
PHGDH-212ENST00000641247 UBE3CQ15386 1083 aa11.57□□□□□ -0.56
PHGDH-212ENST00000641247 NSMFQ6X4W1 530 aa11.57□□□□□ -0.56
PHGDH-212ENST00000641247 AMOTL1Q8IY63 956 aa11.57□□□□□ -0.56
PHGDH-212ENST00000641247 STAG1Q8WVM7 1258 aa11.57□□□□□ -0.56
PHGDH-212ENST00000641247 WNT8BQ93098 351 aa11.57□□□□□ -0.56
PHGDH-212ENST00000641247 STRBPQ96SI9 672 aaKnown RBP11.57□□□□□ -0.56
PHGDH-212ENST00000641247 ARPP21Q9UBL0 812 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-212ENST00000641247 GREB1LQ9C091 1923 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-212ENST00000641247 A6NJR5 290 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 ST18O60284 1047 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 ARIH2O95376 493 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 MCCP23508 829 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 CPT1AP50416 773 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 ALDH5A1P51649 535 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-212ENST00000641247 CHMP4BP1P59074 171 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-212ENST00000641247 BFSP2Q13515 415 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 PTGISQ16647 500 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 TKFCQ3LXA3 575 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 PUS10Q3MIT2 529 aaKnown RBP11.56□□□□□ -0.56
PHGDH-212ENST00000641247 TCEAL5Q5H9L2 206 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 ZKSCAN2Q63HK3 967 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 CNKSR3Q6P9H4 555 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 KCTD1Q719H9 257 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 RPAP2Q8IXW5 612 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-212ENST00000641247 KAT2BQ92831 832 aa11.56□□□□□ -0.56
PHGDH-212ENST00000641247 MRPL38Q96DV4 380 aaKnown RBP11.56□□□□□ -0.56
PHGDH-212ENST00000641247 EPB41L4AQ9HCS5 686 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-212ENST00000641247 GPHNQ9NQX3 736 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-212ENST00000641247 FAM86C1Q9NVL1 165 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms