RNA–Protein interactions for RNA: ENST00000640545.1

GFAP-236, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-236ENST00000640545 IRX6P78412 446 aaPredicted RBP17.17■□□□□ 0.34
GFAP-236ENST00000640545 USH1GQ495M9 461 aa17.17■□□□□ 0.34
GFAP-236ENST00000640545 DUSP28Q4G0W2 176 aa17.17■□□□□ 0.34
GFAP-236ENST00000640545 TAPT1Q6NXT6 567 aa17.17■□□□□ 0.34
GFAP-236ENST00000640545 Q7L0L9 218 aa17.17■□□□□ 0.34
GFAP-236ENST00000640545 MCF2L2Q86YR7 1114 aa17.17■□□□□ 0.34
GFAP-236ENST00000640545 ENAHQ8N8S7 591 aaPredicted RBP17.17■□□□□ 0.34
GFAP-236ENST00000640545 RGS22Q8NE09 1264 aa17.17■□□□□ 0.34
GFAP-236ENST00000640545 CLEC4DQ8WXI8 215 aa17.17■□□□□ 0.34
GFAP-236ENST00000640545 WDR11Q9BZH6 1224 aa17.17■□□□□ 0.34
GFAP-236ENST00000640545 PDGFCQ9NRA1 345 aa17.17■□□□□ 0.34
GFAP-236ENST00000640545 ERICH2A1L162 156 aa17.16■□□□□ 0.34
GFAP-236ENST00000640545 GSPT1P15170 499 aaKnown RBP17.16■□□□□ 0.34
GFAP-236ENST00000640545 PDE4AP27815 886 aa17.16■□□□□ 0.34
GFAP-236ENST00000640545 IRX5P78411 483 aaPredicted RBP17.16■□□□□ 0.34
GFAP-236ENST00000640545 CDC37Q16543 378 aaPredicted RBP17.16■□□□□ 0.34
GFAP-236ENST00000640545 ZNF697Q5TEC3 545 aa17.16■□□□□ 0.34
GFAP-236ENST00000640545 CXCL17Q6UXB2 119 aa17.16■□□□□ 0.34
GFAP-236ENST00000640545 ADGRF4Q8IZF3 695 aa17.16■□□□□ 0.34
GFAP-236ENST00000640545 RNPC3Q96LT9 517 aaKnown RBP17.16■□□□□ 0.34
GFAP-236ENST00000640545 PURBQ96QR8 312 aaKnown RBP17.16■□□□□ 0.34
GFAP-236ENST00000640545 GPHNQ9NQX3 736 aaPredicted RBP17.16■□□□□ 0.34
GFAP-236ENST00000640545 MTMR10Q9NXD2 777 aa17.16■□□□□ 0.34
GFAP-236ENST00000640545 ASTN1O14525 1302 aa17.16■□□□□ 0.34
GFAP-236ENST00000640545 ABCB11O95342 1321 aa17.16■□□□□ 0.34
GFAP-236ENST00000640545 NKRFO15226 690 aaKnown RBP eCLIP17.15■□□□□ 0.34
GFAP-236ENST00000640545 CPT1AP50416 773 aa17.15■□□□□ 0.34
GFAP-236ENST00000640545 PPIGQ13427 754 aaKnown RBP eCLIP17.15■□□□□ 0.34
GFAP-236ENST00000640545 ITGA7Q13683 1181 aa17.15■□□□□ 0.34
GFAP-236ENST00000640545 SART3Q15020 963 aaKnown RBP17.15■□□□□ 0.34
GFAP-236ENST00000640545 C9orf50Q5SZB4 431 aa17.15■□□□□ 0.34
GFAP-236ENST00000640545 SLC30A10Q6XR72 485 aa17.15■□□□□ 0.34
GFAP-236ENST00000640545 RALYLQ86SE5 291 aaKnown RBP17.15■□□□□ 0.34
GFAP-236ENST00000640545 TMEM199Q8N511 208 aa17.15■□□□□ 0.34
GFAP-236ENST00000640545 SLC17A8Q8NDX2 589 aa17.15■□□□□ 0.34
GFAP-236ENST00000640545 VAT1LQ9HCJ6 419 aa17.15■□□□□ 0.34
GFAP-236ENST00000640545 POLR3EQ9NVU0 708 aa17.15■□□□□ 0.34
GFAP-236ENST00000640545 TBX21Q9UL17 535 aa17.15■□□□□ 0.34
GFAP-236ENST00000640545 STXBP5LQ9Y2K9 1186 aa17.15■□□□□ 0.34
GFAP-236ENST00000640545 MRPL11Q9Y3B7 192 aaKnown RBP17.15■□□□□ 0.34
GFAP-236ENST00000640545 CTAGE5O15320 804 aa17.14■□□□□ 0.33
GFAP-236ENST00000640545 ITGB8P26012 769 aa17.14■□□□□ 0.33
GFAP-236ENST00000640545 CHMLP26374 656 aa17.14■□□□□ 0.33
GFAP-236ENST00000640545 SMAD3P84022 425 aaKnown RBP17.14■□□□□ 0.33
GFAP-236ENST00000640545 TRAF1Q13077 416 aa17.14■□□□□ 0.33
GFAP-236ENST00000640545 PPP2R5BQ15173 497 aa17.14■□□□□ 0.33
GFAP-236ENST00000640545 MFSD5Q6N075 450 aa17.14■□□□□ 0.33
GFAP-236ENST00000640545 FBXO11Q86XK2 927 aa17.14■□□□□ 0.33
GFAP-236ENST00000640545 SCFD2Q8WU76 684 aa17.14■□□□□ 0.33
GFAP-236ENST00000640545 DDX49Q9Y6V7 483 aaKnown RBP17.14■□□□□ 0.33
GFAP-236ENST00000640545 MCM3APO60318 1980 aa17.13■□□□□ 0.33
GFAP-236ENST00000640545 FAM126BQ8IXS8 530 aa17.13■□□□□ 0.33
GFAP-236ENST00000640545 OR6J1Q8NGC5 347 aa17.13■□□□□ 0.33
GFAP-236ENST00000640545 NSUN6Q8TEA1 469 aaKnown RBP17.13■□□□□ 0.33
GFAP-236ENST00000640545 CPVLQ9H3G5 476 aa17.13■□□□□ 0.33
GFAP-236ENST00000640545 RBM47A0AV96 593 aaKnown RBP17.12■□□□□ 0.33
GFAP-236ENST00000640545 KPNA6O60684 536 aa17.12■□□□□ 0.33
GFAP-236ENST00000640545 TTLL4Q14679 1199 aa17.12■□□□□ 0.33
GFAP-236ENST00000640545 QRICH1Q2TAL8 776 aa17.12■□□□□ 0.33
GFAP-236ENST00000640545 NCOA7Q8NI08 942 aa17.12■□□□□ 0.33
GFAP-236ENST00000640545 AMNQ9BXJ7 453 aa17.12■□□□□ 0.33
GFAP-236ENST00000640545 KLRF2D3W0D1 207 aa17.11■□□□□ 0.33
GFAP-236ENST00000640545 IFIT3O14879 490 aaKnown RBP17.11■□□□□ 0.33
GFAP-236ENST00000640545 SUPT20HL2P0C7V6 817 aa17.11■□□□□ 0.33
GFAP-236ENST00000640545 TXNP10599 105 aaKnown RBP17.11■□□□□ 0.33
GFAP-236ENST00000640545 EDNRBP24530 442 aa17.11■□□□□ 0.33
GFAP-236ENST00000640545 SLC43A3Q8NBI5 491 aa17.11■□□□□ 0.33
GFAP-236ENST00000640545 FAM161BQ96MY7 647 aa17.11■□□□□ 0.33
GFAP-236ENST00000640545 IWS1Q96ST2 819 aa17.11■□□□□ 0.33
GFAP-236ENST00000640545 PPP1R12CQ9BZL4 782 aa17.11■□□□□ 0.33
GFAP-236ENST00000640545 IL25Q9H293 177 aa17.11■□□□□ 0.33
GFAP-236ENST00000640545 MTIF3Q9H2K0 278 aaKnown RBP17.11■□□□□ 0.33
GFAP-236ENST00000640545 HIPK3Q9H422 1215 aa17.11■□□□□ 0.33
GFAP-236ENST00000640545 JMJD4Q9H9V9 463 aa17.11■□□□□ 0.33
GFAP-236ENST00000640545 LTBP2Q14767 1821 aa17.1■□□□□ 0.33
GFAP-236ENST00000640545 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.1■□□□□ 0.33
GFAP-236ENST00000640545 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.1■□□□□ 0.33
GFAP-236ENST00000640545 SGSM2O43147 1006 aa17.1■□□□□ 0.33
GFAP-236ENST00000640545 CD4P01730 458 aa17.1■□□□□ 0.33
GFAP-236ENST00000640545 MYL3P08590 195 aa17.1■□□□□ 0.33
GFAP-236ENST00000640545 CYP21A2P08686 494 aa17.1■□□□□ 0.33
GFAP-236ENST00000640545 PTH1RQ03431 593 aa17.1■□□□□ 0.33
GFAP-236ENST00000640545 STXBP2Q15833 593 aa17.1■□□□□ 0.33
GFAP-236ENST00000640545 ARHGEF16Q5VV41 709 aa17.1■□□□□ 0.33
GFAP-236ENST00000640545 PSRC1Q6PGN9 363 aaPredicted RBP17.1■□□□□ 0.33
GFAP-236ENST00000640545 RMDN3Q96TC7 470 aa17.1■□□□□ 0.33
GFAP-236ENST00000640545 MTG1Q9BT17 334 aaPredicted RBP17.1■□□□□ 0.33
GFAP-236ENST00000640545 CFBP00751 764 aa17.09■□□□□ 0.33
GFAP-236ENST00000640545 CSF2RAP15509 400 aa17.09■□□□□ 0.33
GFAP-236ENST00000640545 EPHB4P54760 987 aa17.09■□□□□ 0.33
GFAP-236ENST00000640545 WTAPQ15007 396 aa17.09■□□□□ 0.33
GFAP-236ENST00000640545 SEC23AQ15436 765 aa17.09■□□□□ 0.33
GFAP-236ENST00000640545 TMEM63BQ5T3F8 832 aa17.09■□□□□ 0.33
GFAP-236ENST00000640545 CYB5R4Q7L1T6 521 aa17.09■□□□□ 0.33
GFAP-236ENST00000640545 CATIPQ7Z7H3 387 aa17.09■□□□□ 0.33
GFAP-236ENST00000640545 SAMD3Q8N6K7 520 aa17.09■□□□□ 0.33
GFAP-236ENST00000640545 SYTL5Q8TDW5 730 aaPredicted RBP17.09■□□□□ 0.33
GFAP-236ENST00000640545 MAP3K20Q9NYL2 800 aaKnown RBP17.09■□□□□ 0.33
GFAP-236ENST00000640545 LAMA4Q16363 1823 aa17.08■□□□□ 0.33
GFAP-236ENST00000640545 TMEM265A0A087WTH1 108 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms