RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 DDAH1O94760 285 aa20.6■□□□□ 0.89
PTPN11-207ENST00000639857 CALML3P27482 149 aa20.6■□□□□ 0.89
PTPN11-207ENST00000639857 ATN1P54259 1190 aaPredicted RBP20.6■□□□□ 0.89
PTPN11-207ENST00000639857 TNFAIP2Q03169 654 aa20.6■□□□□ 0.89
PTPN11-207ENST00000639857 IQSEC1Q6DN90 963 aa20.6■□□□□ 0.89
PTPN11-207ENST00000639857 CCSAPQ6IQ19 270 aaPredicted RBP20.6■□□□□ 0.89
PTPN11-207ENST00000639857 RBM27Q9P2N5 1060 aaKnown RBP20.6■□□□□ 0.89
PTPN11-207ENST00000639857 ZMYND8Q9ULU4 1186 aaPredicted RBP20.6■□□□□ 0.89
PTPN11-207ENST00000639857 BAZ2BQ9UIF8 2168 aaKnown RBP20.6■□□□□ 0.89
PTPN11-207ENST00000639857 PRC1O43663 620 aa20.59■□□□□ 0.89
PTPN11-207ENST00000639857 C6orf222P0C671 652 aaPredicted RBP20.59■□□□□ 0.89
PTPN11-207ENST00000639857 EDNRBP24530 442 aa20.59■□□□□ 0.89
PTPN11-207ENST00000639857 ACLYP53396 1101 aa20.59■□□□□ 0.89
PTPN11-207ENST00000639857 GHRHRQ02643 423 aa20.59■□□□□ 0.89
PTPN11-207ENST00000639857 CHST3Q7LGC8 479 aa20.59■□□□□ 0.89
PTPN11-207ENST00000639857 SAMD3Q8N6K7 520 aa20.59■□□□□ 0.89
PTPN11-207ENST00000639857 RIOX1Q9H6W3 641 aa20.59■□□□□ 0.89
PTPN11-207ENST00000639857 LY9Q9HBG7 655 aa20.59■□□□□ 0.89
PTPN11-207ENST00000639857 MAP3K20Q9NYL2 800 aaKnown RBP20.59■□□□□ 0.89
PTPN11-207ENST00000639857 GNEQ9Y223 722 aaKnown RBP20.59■□□□□ 0.89
PTPN11-207ENST00000639857 RANBP2P49792 3224 aaKnown RBP20.59■□□□□ 0.89
PTPN11-207ENST00000639857 KIF5BP33176 963 aa20.58■□□□□ 0.89
PTPN11-207ENST00000639857 LIFRP42702 1097 aa20.58■□□□□ 0.89
PTPN11-207ENST00000639857 TSGA10IPQ3SY00 556 aa20.58■□□□□ 0.89
PTPN11-207ENST00000639857 TAPT1Q6NXT6 567 aa20.58■□□□□ 0.89
PTPN11-207ENST00000639857 FBXO16Q8IX29 292 aaPredicted RBP20.58■□□□□ 0.89
PTPN11-207ENST00000639857 PURBQ96QR8 312 aaKnown RBP20.58■□□□□ 0.89
PTPN11-207ENST00000639857 SENP2Q9HC62 589 aa20.58■□□□□ 0.89
PTPN11-207ENST00000639857 PRKAG2Q9UGJ0 569 aa20.58■□□□□ 0.89
PTPN11-207ENST00000639857 ELP1O95163 1332 aa20.57■□□□□ 0.88
PTPN11-207ENST00000639857 RBM47A0AV96 593 aaKnown RBP20.57■□□□□ 0.88
PTPN11-207ENST00000639857 SYN1P17600 705 aa20.57■□□□□ 0.88
PTPN11-207ENST00000639857 SMARCA1P28370 1054 aa20.57■□□□□ 0.88
PTPN11-207ENST00000639857 TLK2Q86UE8 772 aa20.57■□□□□ 0.88
PTPN11-207ENST00000639857 ZNF654Q8IZM8 581 aa20.57■□□□□ 0.88
PTPN11-207ENST00000639857 CTCFLQ8NI51 663 aaPredicted RBP20.57■□□□□ 0.88
PTPN11-207ENST00000639857 FERMT2Q96AC1 680 aa20.57■□□□□ 0.88
PTPN11-207ENST00000639857 GLT1D1Q96MS3 346 aa20.57■□□□□ 0.88
PTPN11-207ENST00000639857 VAT1LQ9HCJ6 419 aa20.57■□□□□ 0.88
PTPN11-207ENST00000639857 STARD7Q9NQZ5 370 aa20.57■□□□□ 0.88
PTPN11-207ENST00000639857 ATP11BQ9Y2G3 1177 aa20.57■□□□□ 0.88
PTPN11-207ENST00000639857 SH2B2O14492 632 aaPredicted RBP20.56■□□□□ 0.88
PTPN11-207ENST00000639857 CALM1P0DP23 149 aa20.56■□□□□ 0.88
PTPN11-207ENST00000639857 CALM2P0DP24 149 aa20.56■□□□□ 0.88
PTPN11-207ENST00000639857 CALM3P0DP25 149 aa20.56■□□□□ 0.88
PTPN11-207ENST00000639857 MAGEA10P43363 369 aaPredicted RBP20.56■□□□□ 0.88
PTPN11-207ENST00000639857 PDE4DQ08499 809 aa20.56■□□□□ 0.88
PTPN11-207ENST00000639857 KRT32Q14532 448 aa20.56■□□□□ 0.88
PTPN11-207ENST00000639857 KCNA10Q16322 511 aa20.56■□□□□ 0.88
PTPN11-207ENST00000639857 TRIM60Q495X7 471 aa20.56■□□□□ 0.88
PTPN11-207ENST00000639857 GNASQ5JWF2 1037 aa20.56■□□□□ 0.88
PTPN11-207ENST00000639857 LZTS2Q9BRK4 669 aa20.56■□□□□ 0.88
PTPN11-207ENST00000639857 MROH7Q68CQ1 1323 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.55■□□□□ 0.88
PTPN11-207ENST00000639857 MYADML2A6NDP7 307 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 CTAGE5O15320 804 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 SMPD1P17405 629 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 GNAQP50148 359 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 FXR1P51114 621 aaKnown RBP eCLIP20.55■□□□□ 0.88
PTPN11-207ENST00000639857 HSD17B4P51659 736 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 DUSP28Q4G0W2 176 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 NOL8Q76FK4 1167 aaKnown RBP20.55■□□□□ 0.88
PTPN11-207ENST00000639857 EEPD1Q7L9B9 569 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 SYTL5Q8TDW5 730 aaPredicted RBP20.55■□□□□ 0.88
PTPN11-207ENST00000639857 NSUN6Q8TEA1 469 aaKnown RBP20.55■□□□□ 0.88
PTPN11-207ENST00000639857 TOX2Q96NM4 488 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 IWS1Q96ST2 819 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 SPZ1Q9BXG8 430 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 AP5M1Q9H0R1 490 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 PCDHA1Q9Y5I3 950 aa20.55■□□□□ 0.88
PTPN11-207ENST00000639857 PNMA6FA0A0J9YX94 578 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 CCDC69A6NI79 296 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 NKRFO15226 690 aaKnown RBP eCLIP20.54■□□□□ 0.88
PTPN11-207ENST00000639857 CYTH3O43739 400 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 ZEB2O60315 1214 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 CABYRO75952 493 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 ASGR1P07306 291 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 FSCN1Q16658 493 aaKnown RBP20.54■□□□□ 0.88
PTPN11-207ENST00000639857 NFXL1Q6ZNB6 911 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 ANKRD33Q7Z3H0 272 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 SGMS1Q86VZ5 419 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 SCFD2Q8WU76 684 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 NEK1Q96PY6 1258 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 SEZ6LQ9BYH1 1024 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 PDGFCQ9NRA1 345 aa20.54■□□□□ 0.88
PTPN11-207ENST00000639857 PPP1R11O60927 126 aaPredicted RBP20.53■□□□□ 0.88
PTPN11-207ENST00000639857 HMGB1P09429 215 aaKnown RBP20.53■□□□□ 0.88
PTPN11-207ENST00000639857 SLC35G1Q2M3R5 365 aa20.53■□□□□ 0.88
PTPN11-207ENST00000639857 HOMER1Q86YM7 354 aa20.53■□□□□ 0.88
PTPN11-207ENST00000639857 PIGSQ96S52 555 aa20.53■□□□□ 0.88
PTPN11-207ENST00000639857 LBHD1Q9BQE6 289 aaPredicted RBP20.53■□□□□ 0.88
PTPN11-207ENST00000639857 WDR11Q9BZH6 1224 aa20.53■□□□□ 0.88
PTPN11-207ENST00000639857 PDLIM7Q9NR12 457 aa20.53■□□□□ 0.88
PTPN11-207ENST00000639857 DDX49Q9Y6V7 483 aaKnown RBP20.53■□□□□ 0.88
PTPN11-207ENST00000639857 A0A0U1RQG5 324 aaPredicted RBP20.52■□□□□ 0.88
PTPN11-207ENST00000639857 OPLAHO14841 1288 aa20.52■□□□□ 0.88
PTPN11-207ENST00000639857 EPB41L2O43491 1005 aaKnown RBP20.52■□□□□ 0.88
PTPN11-207ENST00000639857 REC8O95072 547 aa20.52■□□□□ 0.88
PTPN11-207ENST00000639857 CENPBP07199 599 aaPredicted RBP20.52■□□□□ 0.88
PTPN11-207ENST00000639857 TLE2Q04725 743 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms