RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 KNG1P01042 644 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 KRT4P19013 534 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 NFIXQ14938 502 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 KRTAP15-1Q3LI76 137 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 KIAA0895LQ68EN5 471 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 OVOS1Q6IE37 1185 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 DENND5AQ6IQ26 1287 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 STYK1Q6J9G0 422 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 KIF18BQ86Y91 864 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 LIN37Q96GY3 246 aaPredicted RBP0.73□□□□□ -2.29
CCDC7-215ENST00000639629 PITHD1Q9GZP4 211 aaPredicted RBP0.73□□□□□ -2.29
CCDC7-215ENST00000639629 GP6Q9HCN6 339 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 NLRP2Q9NX02 1062 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 REV1Q9UBZ9 1251 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 SUPT16HQ9Y5B9 1047 aaKnown RBP0.73□□□□□ -2.29
CCDC7-215ENST00000639629 TRBV23OR9-2A0A075B6M9 112 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 GAS2O43903 313 aaKnown RBP0.73□□□□□ -2.29
CCDC7-215ENST00000639629 LDHBP07195 334 aaKnown RBP0.73□□□□□ -2.29
CCDC7-215ENST00000639629 ZSCAN22P10073 491 aaPredicted RBP0.73□□□□□ -2.29
CCDC7-215ENST00000639629 HOXC12P31275 282 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 EIF4A3P38919 411 aaKnown RBP0.73□□□□□ -2.29
CCDC7-215ENST00000639629 TCF15Q12870 199 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 AUHQ13825 339 aaKnown RBP0.73□□□□□ -2.29
CCDC7-215ENST00000639629 KRTAP20-1Q3LI63 56 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 NBPF6Q5VWK0 638 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 MAP1SQ66K74 1059 aaPredicted RBP0.73□□□□□ -2.29
CCDC7-215ENST00000639629 CPZQ66K79 652 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 C12orf40Q86WS4 652 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 KLHL36Q8N4N3 616 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 DTX3Q8N9I9 347 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 FRS2Q8WU20 508 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 NKD2Q969F2 451 aaPredicted RBP0.73□□□□□ -2.29
CCDC7-215ENST00000639629 NBPF4Q96M43 638 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 ORAI2Q96SN7 254 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 C1QTNF7Q9BXJ2 289 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 KCNF1Q9H3M0 494 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 JADE2Q9NQC1 790 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 PDLIM7Q9NR12 457 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 SYBUQ9NX95 663 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 CEP72Q9P209 647 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 DUSP10Q9Y6W6 482 aa0.73□□□□□ -2.29
CCDC7-215ENST00000639629 MACF1Q9UPN3 7388 aaKnown RBP0.73□□□□□ -2.29
CCDC7-215ENST00000639629 LRRN2O75325 713 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 GUCY2CP25092 1073 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 CSF2RBP32927 897 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 PRELPP51888 382 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 KRTAP10-7P60409 375 aaPredicted RBP0.72□□□□□ -2.29
CCDC7-215ENST00000639629 UNC5AQ6ZN44 842 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 GLYCTKQ8IVS8 523 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 PUM2Q8TB72 1066 aaKnown RBP eCLIP0.72□□□□□ -2.29
CCDC7-215ENST00000639629 EPB41L4BQ9H329 900 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 PHAXQ9H814 394 aaKnown RBP0.72□□□□□ -2.29
CCDC7-215ENST00000639629 KCND1Q9NSA2 647 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 AURKAIP1Q9NWT8 199 aaPredicted RBP0.72□□□□□ -2.29
CCDC7-215ENST00000639629 GRID2IPA4D2P6 1211 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 PRICKLE3O43900 615 aaPredicted RBP0.72□□□□□ -2.29
CCDC7-215ENST00000639629 SLPIP03973 132 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 WASP42768 502 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 KRT85P78386 507 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 ZNF296Q8WUU4 475 aaPredicted RBP0.72□□□□□ -2.29
CCDC7-215ENST00000639629 LINC00476Q8WZB0 136 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 VOPP1Q96AW1 172 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 PPP4R1LQ9P1A2 415 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 NOTCH1P46531 2555 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 HERVK_113P62684 666 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 ST5P78524 1137 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 DPTQ07507 201 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 TOP3AQ13472 1001 aaPredicted RBP0.72□□□□□ -2.29
CCDC7-215ENST00000639629 NTRK3Q16288 839 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 ATG14Q6ZNE5 492 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 TTC6Q86TZ1 520 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 SP8Q8IXZ3 490 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 PHACTR4Q8IZ21 702 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 ST13P5Q8NFI4 369 aaPredicted RBP0.72□□□□□ -2.29
CCDC7-215ENST00000639629 CHST7Q9NS84 486 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 TMEM74BQ9NUR3 256 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 GPATCH2Q9NW75 528 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 PCDHA4Q9UN74 947 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 TNFRSF18Q9Y5U5 241 aa0.72□□□□□ -2.29
CCDC7-215ENST00000639629 LRRC10BA6NIK2 292 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 DCDC2CA8MYV0 355 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 C9IYK1 514 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 GPR42O15529 346 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 SGSM2O43147 1006 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 INHBBP09529 407 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 GFRA1P56159 465 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 EIF4HQ15056 248 aaKnown RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 TARBP2Q15633 366 aaKnown RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 ZCCHC14Q8WYQ9 949 aaKnown RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 SEC14L1Q92503 715 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 PRRX2Q99811 253 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 ZNF747Q9BV97 191 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 OSBPL6Q9BZF3 934 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 WHRNQ9P202 907 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 BTBD7Q9P203 1132 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 KIAA1522Q9P206 1035 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 OTOL1A6NHN0 477 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 KRTAP29-1A8MX34 341 aaPredicted RBP0.71□□□□□ -2.3
CCDC7-215ENST00000639629 ZNF561-AS1K7EIQ3 104 aa0.71□□□□□ -2.3
CCDC7-215ENST00000639629 B4GALT3O60512 393 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms