RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 TECP42680 631 aa16.34■□□□□ 0.21
CHD1L-211ENST00000639534 TXKP42681 527 aa16.34■□□□□ 0.21
CHD1L-211ENST00000639534 SPAG1Q07617 926 aa16.34■□□□□ 0.21
CHD1L-211ENST00000639534 RRP1BQ14684 758 aaKnown RBP16.34■□□□□ 0.21
CHD1L-211ENST00000639534 SHROOM1Q2M3G4 852 aaPredicted RBP16.34■□□□□ 0.21
CHD1L-211ENST00000639534 CCDC144BQ3MJ40 725 aa16.34■□□□□ 0.21
CHD1L-211ENST00000639534 NAALADL2Q58DX5 795 aa16.34■□□□□ 0.21
CHD1L-211ENST00000639534 HOOK2Q96ED9 719 aa16.34■□□□□ 0.21
CHD1L-211ENST00000639534 CDK5RAP3Q96JB5 506 aa16.34■□□□□ 0.21
CHD1L-211ENST00000639534 MBOAT7Q96N66 472 aa16.34■□□□□ 0.21
CHD1L-211ENST00000639534 ANO3Q9BYT9 981 aa16.34■□□□□ 0.21
CHD1L-211ENST00000639534 VCPKMTQ9H867 229 aa16.34■□□□□ 0.21
CHD1L-211ENST00000639534 RWDD2AQ9UIY3 292 aa16.34■□□□□ 0.21
CHD1L-211ENST00000639534 A0A1W2PRG0 241 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 TBX3O15119 743 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 TDP2O95551 362 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 PLCG1P19174 1290 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 JAG1P78504 1218 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 FMR1Q06787 632 aaKnown RBP eCLIP16.33■□□□□ 0.27e-12■■□□□ 13.1
CHD1L-211ENST00000639534 KRT79Q5XKE5 535 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 TMC6Q7Z403 805 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 FILIP1Q7Z7B0 1213 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 SLFN12Q8IYM2 578 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 ANKRD20A12PQ8NF67 263 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 CACTINQ8WUQ7 758 aaKnown RBP16.33■□□□□ 0.2
CHD1L-211ENST00000639534 C7orf25Q9BPX7 421 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 SGIP1Q9BQI5 828 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 TMEM39BQ9GZU3 492 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 EHMT1Q9H9B1 1298 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 PGAP2Q9UHJ9 254 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 FEM1BQ9UK73 627 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 PRR12Q9ULL5 1215 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 BCS1LQ9Y276 419 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 KDM3AQ9Y4C1 1321 aa16.33■□□□□ 0.2
CHD1L-211ENST00000639534 SPDYE3A6NKU9 549 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 PP2D1A8MPX8 630 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 PIK3CDO00329 1044 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 SLC37A4O43826 429 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 RHOBTB3O94955 611 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 ATP1A3P13637 1013 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 CDC25AP30304 524 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 KCNJ6P48051 423 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 PAK1Q13153 545 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 TPD52L1Q16890 204 aaPredicted RBP16.32■□□□□ 0.2
CHD1L-211ENST00000639534 FILIP1LQ4L180 1135 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 VSTM4Q8IW00 320 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 NUP88Q99567 741 aaPredicted RBP16.32■□□□□ 0.2
CHD1L-211ENST00000639534 MTRQ99707 1265 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 NT5C3AQ9H0P0 336 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 BLZF1Q9H2G9 400 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 PYCARDQ9ULZ3 195 aa16.32■□□□□ 0.2
CHD1L-211ENST00000639534 FZD9O00144 591 aa16.31■□□□□ 0.2
CHD1L-211ENST00000639534 MEIS2O14770 477 aa16.31■□□□□ 0.2
CHD1L-211ENST00000639534 SFPQP23246 707 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHD1L-211ENST00000639534 RASA3Q14644 834 aa16.31■□□□□ 0.2
CHD1L-211ENST00000639534 R3HDM1Q15032 1099 aaKnown RBP16.31■□□□□ 0.2
CHD1L-211ENST00000639534 NBPF9Q3BBW0 867 aa16.31■□□□□ 0.2
CHD1L-211ENST00000639534 CDKAL1Q5VV42 579 aa16.31■□□□□ 0.2
CHD1L-211ENST00000639534 SV2BQ7L1I2 683 aa16.31■□□□□ 0.2
CHD1L-211ENST00000639534 CCDC112Q8NEF3 446 aa16.31■□□□□ 0.2
CHD1L-211ENST00000639534 NOC3LQ8WTT2 800 aaKnown RBP16.31■□□□□ 0.2
CHD1L-211ENST00000639534 STAMQ92783 540 aa16.31■□□□□ 0.2
CHD1L-211ENST00000639534 RANBP17Q9H2T7 1088 aaKnown RBP16.31■□□□□ 0.2
CHD1L-211ENST00000639534 PPP1R1BQ9UD71 204 aaPredicted RBP16.31■□□□□ 0.2
CHD1L-211ENST00000639534 PNMA2Q9UL42 364 aa16.31■□□□□ 0.2
CHD1L-211ENST00000639534 ABCB11O95342 1321 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 USP17L15C9J2P7 530 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 USP17L13C9JLJ4 530 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 USP17L11C9JVI0 530 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 USP17L18D6R9N7 530 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 USP17L22D6RA61 530 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 USP17L17D6RBQ6 530 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 EDIL3O43854 480 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 CD44P16070 742 aaKnown RBP16.3■□□□□ 0.2
CHD1L-211ENST00000639534 CASP1P29466 404 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 SREBF1P36956 1147 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 ARHGAP4P98171 946 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 Q4G0T1 1027 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 COBLL1Q53SF7 1204 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 KLHL10Q6JEL2 608 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 CNNM4Q6P4Q7 775 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 USP17L6PQ6QN14 398 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 TRMT44Q8IYL2 757 aaKnown RBP16.3■□□□□ 0.2
CHD1L-211ENST00000639534 ACER1Q8TDN7 264 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 LPAR1Q92633 364 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 DHTKD1Q96HY7 919 aaPredicted RBP16.3■□□□□ 0.2
CHD1L-211ENST00000639534 MMTAG2Q9BU76 263 aaKnown RBP16.3■□□□□ 0.2
CHD1L-211ENST00000639534 KCND1Q9NSA2 647 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 EXOC1Q9NV70 894 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 PCDHA12Q9UN75 941 aa16.3■□□□□ 0.2
CHD1L-211ENST00000639534 MRPL11Q9Y3B7 192 aaKnown RBP16.3■□□□□ 0.2
CHD1L-211ENST00000639534 PVALEFA0A1B0GWK0 134 aa16.29■□□□□ 0.2
CHD1L-211ENST00000639534 H7C1D1 291 aa16.29■□□□□ 0.2
CHD1L-211ENST00000639534 PSMA7O14818 248 aa16.29■□□□□ 0.2
CHD1L-211ENST00000639534 KLRC4O43908 158 aa16.29■□□□□ 0.2
CHD1L-211ENST00000639534 CYP3A4P08684 503 aa16.29■□□□□ 0.2
CHD1L-211ENST00000639534 SKILP12757 684 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms