RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 CCDC129Q6ZRS4 1044 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 RIC3Q7Z5B4 369 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 ARHGEF25Q86VW2 580 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 DZIP1Q86YF9 867 aaKnown RBP7.87□□□□□ -1.15
NECAP1-213ENST00000638883 RBM12BQ8IXT5 1001 aaKnown RBP7.87□□□□□ -1.15
NECAP1-213ENST00000638883 CLASRPQ8N2M8 674 aaKnown RBP7.87□□□□□ -1.15
NECAP1-213ENST00000638883 ABTB1Q969K4 478 aaPredicted RBP7.87□□□□□ -1.15
NECAP1-213ENST00000638883 CCDC43Q96MW1 224 aaKnown RBP7.87□□□□□ -1.15
NECAP1-213ENST00000638883 BPIFA3Q9BQP9 254 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 PAIP2BQ9ULR5 123 aaKnown RBP7.87□□□□□ -1.15
NECAP1-213ENST00000638883 ATXN2Q99700 1313 aaKnown RBP7.87□□□□□ -1.15
NECAP1-213ENST00000638883 LGR5O75473 907 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 SASH1O94885 1247 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 KRT14P02533 472 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 PTH1RQ03431 593 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 TSNAXIP1Q2TAA8 658 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 Q4G0T1 1027 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 HSP90AB4PQ58FF6 505 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 FAM133BQ5BKY9 247 aaKnown RBP7.87□□□□□ -1.15
NECAP1-213ENST00000638883 TCERG1LQ5VWI1 586 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 CNGA4Q8IV77 575 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 FGD4Q96M96 766 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 FSD1Q9BTV5 496 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 LRRC2Q9BYS8 371 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 ABCF2Q9UG63 623 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 C2CD2Q9Y426 696 aa7.87□□□□□ -1.15
NECAP1-213ENST00000638883 CARNS1A5YM72 827 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 SMNDC1O75940 238 aaKnown RBP eCLIP7.86□□□□□ -1.15
NECAP1-213ENST00000638883 GLRX3O76003 335 aaKnown RBP7.86□□□□□ -1.15
NECAP1-213ENST00000638883 YEATS4O95619 227 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 IDEP14735 1019 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 CNGA1P29973 690 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 MDH1P40925 334 aaKnown RBP7.86□□□□□ -1.15
NECAP1-213ENST00000638883 SFSWAPQ12872 951 aaKnown RBP7.86□□□□□ -1.15
NECAP1-213ENST00000638883 CCDC102BQ68D86 513 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 HOOK3Q86VS8 718 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 JAKMIP2Q96AA8 810 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 NUP58Q9BVL2 599 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 SAMD15Q9P1V8 674 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 EPHB4P54760 987 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 PRSS12P56730 875 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 SETDB1Q15047 1291 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 MAP7D1Q3KQU3 841 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 SH2D4BQ5SQS7 431 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 ATL3Q6DD88 541 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 TYW1BQ6NUM6 668 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 TLDC1Q6P9B6 456 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 CCDC155Q8N6L0 562 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 ABTB2Q8N961 1025 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 MAIP1Q8WWC4 291 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 WDR90Q96KV7 1748 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 RNF8O76064 485 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 HNRNPCP07910 306 aaKnown RBP eCLIP7.86□□□□□ -1.15
NECAP1-213ENST00000638883 GBP1P32455 592 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 DNA2P51530 1060 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 GUCY2FP51841 1108 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 APBA1Q02410 837 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 IMMTQ16891 758 aaKnown RBP7.86□□□□□ -1.15
NECAP1-213ENST00000638883 TTLL7Q6ZT98 887 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 TOM1L2Q6ZVM7 507 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 MAEAQ7L5Y9 396 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 PPP1R42Q7Z4L9 355 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 TMTC1Q8IUR5 882 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 TRMT44Q8IYL2 757 aaKnown RBP7.86□□□□□ -1.15
NECAP1-213ENST00000638883 TMTC2Q8N394 836 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 TC2NQ8N9U0 490 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 CTNNBL1Q8WYA6 563 aaPredicted RBP7.86□□□□□ -1.15
NECAP1-213ENST00000638883 LRRC59Q96AG4 307 aaKnown RBP7.86□□□□□ -1.15
NECAP1-213ENST00000638883 MMS19Q96T76 1030 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 HDAC6Q9UBN7 1215 aa7.86□□□□□ -1.15
NECAP1-213ENST00000638883 M0R2C6 588 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 KRT86O43790 486 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 GIGYF1O75420 1035 aaPredicted RBP7.85□□□□□ -1.15
NECAP1-213ENST00000638883 GABBR2O75899 941 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 SLC7A5Q01650 507 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 C2orf54Q08AI8 447 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 PRPF4BQ13523 1007 aaKnown RBP7.85□□□□□ -1.15
NECAP1-213ENST00000638883 CCDC6Q16204 474 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 ANKRD20A8PQ5CZ79 823 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 C8orf74Q6P047 294 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 LONP2Q86WA8 852 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 RAB11FIP4Q86YS3 637 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 CCDC197Q8NCU1 140 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 TCHPQ9BT92 498 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 DNAAF2Q9NVR5 837 aaKnown RBP7.85□□□□□ -1.15
NECAP1-213ENST00000638883 GRIN2DO15399 1336 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 GCOM1H8Y6P7 765 aaPredicted RBP7.85□□□□□ -1.15
NECAP1-213ENST00000638883 A1BGP04217 495 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 MYZAPP0CAP1 466 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 ELF3P78545 371 aaPredicted RBP7.85□□□□□ -1.15
NECAP1-213ENST00000638883 PAK2Q13177 524 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 FMR1NBQ8N0W7 255 aaPredicted RBP7.85□□□□□ -1.15
NECAP1-213ENST00000638883 RNF10Q8N5U6 811 aaKnown RBP7.85□□□□□ -1.15
NECAP1-213ENST00000638883 GBP7Q8N8V2 638 aaPredicted RBP7.85□□□□□ -1.15
NECAP1-213ENST00000638883 PI4K2BQ8TCG2 481 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 XAGE2Q96GT9 111 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 IFT74Q96LB3 600 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 A0A0G2JMZ2 1700 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 LRRC37A2A6NM11 1700 aa7.85□□□□□ -1.15
NECAP1-213ENST00000638883 COL15A1P39059 1388 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms