RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 RPS6P62753 249 aaKnown RBP10.25□□□□□ -0.77
NECAP1-212ENST00000638787 STK3Q13188 491 aa10.25□□□□□ -0.77
NECAP1-212ENST00000638787 ZNF467Q7Z7K2 595 aaPredicted RBP10.25□□□□□ -0.77
NECAP1-212ENST00000638787 TBC1D5Q92609 795 aa10.25□□□□□ -0.77
NECAP1-212ENST00000638787 TINF2Q9BSI4 451 aa10.25□□□□□ -0.77
NECAP1-212ENST00000638787 MAF1Q9H063 256 aa10.25□□□□□ -0.77
NECAP1-212ENST00000638787 ASTN1O14525 1302 aa10.25□□□□□ -0.77
NECAP1-212ENST00000638787 RPTORQ8N122 1335 aa10.25□□□□□ -0.77
NECAP1-212ENST00000638787 CALML3P27482 149 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 NOL8Q76FK4 1167 aaKnown RBP10.24□□□□□ -0.77
NECAP1-212ENST00000638787 MSL3Q8N5Y2 521 aaKnown RBP10.24□□□□□ -0.77
NECAP1-212ENST00000638787 TBC1D32Q96NH3 1257 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 PURBQ96QR8 312 aaKnown RBP10.24□□□□□ -0.77
NECAP1-212ENST00000638787 TMEM106CQ9BVX2 250 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.24□□□□□ -0.77
NECAP1-212ENST00000638787 RNF208Q9H0X6 261 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 HMX1Q9NP08 348 aaPredicted RBP10.24□□□□□ -0.77
NECAP1-212ENST00000638787 TPCN1Q9ULQ1 816 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 V9GY48 417 aaPredicted RBP10.24□□□□□ -0.77
NECAP1-212ENST00000638787 CENPFP49454 3210 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 SYNGAP1Q96PV0 1343 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 CFBP00751 764 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 CYBAP13498 195 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 SOX10P56693 466 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 NTRK3Q16288 839 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 MAMDC4Q6UXC1 1216 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 TRPV1Q8NER1 839 aa10.24□□□□□ -0.77
NECAP1-212ENST00000638787 PAK6Q9NQU5 681 aaPredicted RBP10.24□□□□□ -0.77
NECAP1-212ENST00000638787 CAPN15O75808 1086 aa10.23□□□□□ -0.77
NECAP1-212ENST00000638787 IFNAR1P17181 557 aa10.23□□□□□ -0.77
NECAP1-212ENST00000638787 CCND3P30281 292 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-212ENST00000638787 HSD17B4P51659 736 aa10.23□□□□□ -0.77
NECAP1-212ENST00000638787 GHRHRQ02643 423 aa10.23□□□□□ -0.77
NECAP1-212ENST00000638787 RABEP1Q15276 862 aa10.23□□□□□ -0.77
NECAP1-212ENST00000638787 WWC2Q6AWC2 1192 aa10.23□□□□□ -0.77
NECAP1-212ENST00000638787 ARMCX2Q7L311 632 aa10.23□□□□□ -0.77
NECAP1-212ENST00000638787 HEATR3Q7Z4Q2 680 aa10.23□□□□□ -0.77
NECAP1-212ENST00000638787 SYTL5Q8TDW5 730 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-212ENST00000638787 GPKOWQ92917 476 aaPredicted RBP eCLIP10.23□□□□□ -0.77
NECAP1-212ENST00000638787 PHKBQ93100 1093 aa10.23□□□□□ -0.77
NECAP1-212ENST00000638787 SLKQ9H2G2 1235 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-212ENST00000638787 ADD3Q9UEY8 706 aaKnown RBP10.23□□□□□ -0.77
NECAP1-212ENST00000638787 POTEFA5A3E0 1075 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 ASB14A6NK59 587 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 CPLX1O14810 134 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 PFKFB2O60825 505 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 PPFIA3O75145 1194 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 SNAI1O95863 264 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 GJB1P08034 283 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 ALDH5A1P51649 535 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 SCRN1Q12765 414 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 PRAMEF19Q5SWL8 479 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 SAMD3Q8N6K7 520 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 COL20A1Q9P218 1284 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 RBM27Q9P2N5 1060 aaKnown RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 NRBP1Q9UHY1 535 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 CNPY2Q9Y2B0 182 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 LRRC37A2A6NM11 1700 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 LOC102724159A0A0B4J2E5 919 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 GCOM1H8Y6P7 765 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 hCG_1984214I3L0E3 225 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 PRPF3O43395 683 aaKnown RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 LARGE1O95461 756 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 POLR2MP0CAP2 368 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 CNGA1P29973 690 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 HOXA13P31271 388 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 AKAP17AQ02040 695 aaKnown RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 PWP2Q15269 919 aaKnown RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 ME3Q16798 604 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 PFKFB3Q16875 520 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 CPLX2Q6PUV4 134 aaKnown RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 ZNF713Q8N859 430 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 DNERQ8NFT8 737 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 DEFB118Q96PH6 123 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 TAAR1Q96RJ0 339 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 SLC26A6Q9BXS9 759 aa10.22□□□□□ -0.77
NECAP1-212ENST00000638787 RNF26Q9BY78 433 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 MAP3K20Q9NYL2 800 aaKnown RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 DDX49Q9Y6V7 483 aaKnown RBP10.22□□□□□ -0.77
NECAP1-212ENST00000638787 STXBP3O00186 592 aa10.21□□□□□ -0.77
NECAP1-212ENST00000638787 ZNF865P0CJ78 1059 aaPredicted RBP10.21□□□□□ -0.77
NECAP1-212ENST00000638787 SCG2P13521 617 aa10.21□□□□□ -0.77
NECAP1-212ENST00000638787 NAPAP54920 295 aa10.21□□□□□ -0.77
NECAP1-212ENST00000638787 PKN1Q16512 942 aa10.21□□□□□ -0.77
NECAP1-212ENST00000638787 TYW1BQ6NUM6 668 aa10.21□□□□□ -0.77
NECAP1-212ENST00000638787 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
NECAP1-212ENST00000638787 MORC4Q8TE76 937 aa10.21□□□□□ -0.77
NECAP1-212ENST00000638787 U2AF1L4Q8WU68 220 aaKnown RBP10.21□□□□□ -0.77
NECAP1-212ENST00000638787 ABHD16BQ9H3Z7 469 aa10.21□□□□□ -0.77
NECAP1-212ENST00000638787 BARHL2Q9NY43 387 aa10.21□□□□□ -0.77
NECAP1-212ENST00000638787 ZHX1Q9UKY1 873 aaPredicted RBP10.21□□□□□ -0.77
NECAP1-212ENST00000638787 FRMPD3Q5JV73 1810 aa10.21□□□□□ -0.78
NECAP1-212ENST00000638787 SGPL1O95470 568 aa10.21□□□□□ -0.78
NECAP1-212ENST00000638787 GJA8P48165 433 aa10.21□□□□□ -0.78
NECAP1-212ENST00000638787 SSRP1Q08945 709 aaKnown RBP10.21□□□□□ -0.78
NECAP1-212ENST00000638787 ACVR2BQ13705 512 aa10.21□□□□□ -0.78
NECAP1-212ENST00000638787 FCHSD1Q86WN1 690 aa10.21□□□□□ -0.78
NECAP1-212ENST00000638787 TRIM22Q8IYM9 498 aa10.21□□□□□ -0.78
NECAP1-212ENST00000638787 NECAB1Q8N987 351 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms