RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ADAMTS2O95450 1211 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 USP17L8P0C7I0 530 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 CCDC70Q6NSX1 233 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 NFRKBQ6P4R8 1299 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 C2CD5Q86YS7 1000 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 FAM114A1Q8IWE2 563 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 AMOTL1Q8IY63 956 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 ATP8A2Q9NTI2 1148 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 ARPP21Q9UBL0 812 aaPredicted RBP12.16□□□□□ -0.46
SNIP1-204ENST00000638725 MINPP1Q9UNW1 487 aa12.16□□□□□ -0.46
SNIP1-204ENST00000638725 A0A1W2PQJ5 194 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 EXOC5O00471 708 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 CYTH3O43739 400 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 USO1O60763 962 aaKnown RBP12.15□□□□□ -0.46
SNIP1-204ENST00000638725 CXCR5P32302 372 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 CCT5P48643 541 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 CDK17Q00537 523 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 FIGNQ5HY92 759 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 FKBP15Q5T1M5 1219 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 ZSCAN29Q8IWY8 852 aaPredicted RBP12.15□□□□□ -0.46
SNIP1-204ENST00000638725 SPATA4Q8NEY3 305 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 IPO4Q8TEX9 1081 aaKnown RBP12.15□□□□□ -0.46
SNIP1-204ENST00000638725 PPM1EQ8WY54 764 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 CCDC47Q96A33 483 aaKnown RBP12.15□□□□□ -0.46
SNIP1-204ENST00000638725 FAM207AQ9NSI2 230 aaPredicted RBP12.15□□□□□ -0.46
SNIP1-204ENST00000638725 MCM9Q9NXL9 1143 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 JAG2Q9Y219 1238 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 PCDHA13Q9Y5I0 950 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 IRAK1P51617 712 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 KIF11P52732 1056 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 ERFEQ4G0M1 354 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 KIAA0895Q8NCT3 520 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 DYNLL2Q96FJ2 89 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 MAD2L2Q9UI95 211 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
SNIP1-204ENST00000638725 LAMB2P55268 1798 aa12.15□□□□□ -0.47
SNIP1-204ENST00000638725 KIAA1551Q9HCM1 1747 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 STXBP3O00186 592 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 EIF4A3P38919 411 aaKnown RBP12.14□□□□□ -0.47
SNIP1-204ENST00000638725 GRM4Q14833 912 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 SBK1Q52WX2 424 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 TSEN2Q8NCE0 465 aaKnown RBP12.14□□□□□ -0.47
SNIP1-204ENST00000638725 CELF1Q92879 486 aaKnown RBP12.14□□□□□ -0.47
SNIP1-204ENST00000638725 OSBPL9Q96SU4 736 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 SEMA6BQ9H3T3 888 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 SLC39A2Q9NP94 309 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 TCP11L1Q9NUJ3 509 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 BSDC1Q9NW68 430 aaPredicted RBP12.14□□□□□ -0.47
SNIP1-204ENST00000638725 TFCP2L1Q9NZI6 479 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 MYH1P12882 1939 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 USP17L3A6NCW0 530 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 USP17L4A6NCW7 530 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 NCK2O43639 380 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 OR52Z1P0C646 297 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 PRPHP41219 470 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 HSPA2P54652 639 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 PPFIA1Q13136 1202 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 SEMA3FQ13275 785 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 LETM2Q2VYF4 491 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 USP17L1Q7RTZ2 530 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 DAGLBQ8NCG7 672 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 CPVLQ9H3G5 476 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 CUEDC2Q9H467 287 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 DEF6Q9H4E7 631 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 SALL4Q9UJQ4 1053 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 SIK3Q9Y2K2 1263 aa12.14□□□□□ -0.47
SNIP1-204ENST00000638725 ERCC3P19447 782 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 ITPK1Q13572 414 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 HAUS3Q68CZ6 603 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 TTC19Q6DKK2 380 aaPredicted RBP12.13□□□□□ -0.47
SNIP1-204ENST00000638725 ZNF572Q7Z3I7 529 aaPredicted RBP12.13□□□□□ -0.47
SNIP1-204ENST00000638725 DGKHQ86XP1 1220 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 EFCAB13Q8IY85 973 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 ANKRD13CQ8N6S4 541 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 C7orf25Q9BPX7 421 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 CAPS2Q9BXY5 557 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 MAGEF1Q9HAY2 307 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 BARHL2Q9NY43 387 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 HYOU1Q9Y4L1 999 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 CASZ1Q86V15 1759 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 GRIN2DO15399 1336 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 MYH10P35580 1976 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 LAD1O00515 517 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 AKR1B10O60218 316 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 CCNT1O60563 726 aaKnown RBP12.13□□□□□ -0.47
SNIP1-204ENST00000638725 GOLGA8HP0CJ92 632 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 HNRNPH3P31942 346 aaKnown RBP12.13□□□□□ -0.47
SNIP1-204ENST00000638725 TECP42680 631 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 GNGT1P63211 74 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 ATP2B2Q01814 1243 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 CCDC181Q5TID7 509 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 TADA2BQ86TJ2 420 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 ACSBG1Q96GR2 724 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 MMRN2Q9H8L6 949 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 DOT1LQ8TEK3 1739 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 ITIH3Q06033 890 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 VWA3BQ502W6 1294 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 BCAS4Q8TDM0 211 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms