RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 BANK1Q8NDB2 785 aa20.19■□□□□ 0.82
SCARB2-213ENST00000638680 GCC2Q8IWJ2 1684 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 UBE3CQ15386 1083 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 LRCH2Q5VUJ6 765 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 ABCB6Q9NP58 842 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 MYL7Q01449 175 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 ZKSCAN8Q15776 578 aaPredicted RBP20.18■□□□□ 0.82
SCARB2-213ENST00000638680 ZBTB38Q8NAP3 1195 aaPredicted RBP20.18■□□□□ 0.82
SCARB2-213ENST00000638680 TBC1D22AQ8WUA7 517 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 ARMCX5Q6P1M9 558 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 CCDC127Q96BQ5 260 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 KIAA1024Q9UPX6 916 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 FTCDO95954 541 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 RETREG2Q8NC44 543 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 COPRSQ9NQ92 184 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 DAAM1Q9Y4D1 1078 aa20.18■□□□□ 0.82
SCARB2-213ENST00000638680 CASP8Q14790 479 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 FAM133BQ5BKY9 247 aaKnown RBP20.17■□□□□ 0.82
SCARB2-213ENST00000638680 PLTPP55058 493 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 XKR9Q5GH70 373 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 LARP4BQ92615 738 aaKnown RBP20.17■□□□□ 0.82
SCARB2-213ENST00000638680 PUS3Q9BZE2 481 aaKnown RBP20.17■□□□□ 0.82
SCARB2-213ENST00000638680 NHEJ1Q9H9Q4 299 aaPredicted RBP20.17■□□□□ 0.82
SCARB2-213ENST00000638680 RESTQ13127 1097 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 AP1ARQ63HQ0 302 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 SCYL1Q96KG9 808 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 CUEDC2Q9H467 287 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 SMIM24O75264 130 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 SH3BGRP55822 239 aaPredicted RBP20.17■□□□□ 0.82
SCARB2-213ENST00000638680 LRRC41Q15345 812 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 RASGRP4Q8TDF6 673 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 KCNG1Q9UIX4 513 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 TESPA1A2RU30 521 aaPredicted RBP20.17■□□□□ 0.82
SCARB2-213ENST00000638680 RPS8P62241 208 aaKnown RBP20.17■□□□□ 0.82
SCARB2-213ENST00000638680 DBN1Q16643 649 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 MFSD14BQ5SR56 506 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 TRIM50Q86XT4 487 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.17■□□□□ 0.82
SCARB2-213ENST00000638680 SEPT10Q9P0V9 454 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 PCDHA4Q9UN74 947 aa20.17■□□□□ 0.82
SCARB2-213ENST00000638680 PNMA6AP0CW24 399 aaPredicted RBP20.16■□□□□ 0.82
SCARB2-213ENST00000638680 SETSIPP0DME0 302 aa20.16■□□□□ 0.82
SCARB2-213ENST00000638680 PHKA1P46020 1223 aa20.16■□□□□ 0.82
SCARB2-213ENST00000638680 PGRMC1O00264 195 aaKnown RBP20.16■□□□□ 0.82
SCARB2-213ENST00000638680 NSFP46459 744 aaKnown RBP20.16■□□□□ 0.82
SCARB2-213ENST00000638680 YARSP54577 528 aaKnown RBP20.16■□□□□ 0.82
SCARB2-213ENST00000638680 RWDD2AQ9UIY3 292 aa20.16■□□□□ 0.82
SCARB2-213ENST00000638680 THRAP3Q9Y2W1 955 aaKnown RBP20.16■□□□□ 0.82
SCARB2-213ENST00000638680 YWHAGP61981 247 aaKnown RBP eCLIP20.16■□□□□ 0.82
SCARB2-213ENST00000638680 CYP4A11Q02928 519 aa20.16■□□□□ 0.82
SCARB2-213ENST00000638680 ENOX1Q8TC92 643 aaKnown RBP20.16■□□□□ 0.82
SCARB2-213ENST00000638680 PPP1R9AQ9ULJ8 1098 aa20.16■□□□□ 0.82
SCARB2-213ENST00000638680 LAD1O00515 517 aa20.16■□□□□ 0.82
SCARB2-213ENST00000638680 CTNND1O60716 968 aaKnown RBP20.16■□□□□ 0.82
SCARB2-213ENST00000638680 NR2F2P24468 414 aa20.16■□□□□ 0.82
SCARB2-213ENST00000638680 RNF26Q9BY78 433 aaPredicted RBP20.16■□□□□ 0.82
SCARB2-213ENST00000638680 SLFN14P0C7P3 912 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 GTF2IP78347 998 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 ARID5BQ14865 1188 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 MCTP2Q6DN12 878 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 TEKT1Q969V4 418 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 HAUS1Q96CS2 278 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 TRAPPC10P48553 1259 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 HNRNPH2P55795 449 aaKnown RBP20.15■□□□□ 0.82
SCARB2-213ENST00000638680 DHX9Q08211 1270 aaKnown RBP20.15■□□□□ 0.82
SCARB2-213ENST00000638680 DIXDC1Q155Q3 683 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 CCDC93Q567U6 631 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 SORBS3O60504 671 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 SLC7A5Q01650 507 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 SNX1Q13596 522 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 RCN2Q14257 317 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 MAN2A1Q16706 1144 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 TTBK2Q6IQ55 1244 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 ABCC12Q96J65 1359 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 ERVV-2B6SEH9 535 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 MMP1P03956 469 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 POLR2MP0CAP2 368 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 CDCA7Q9BWT1 371 aaPredicted RBP20.15■□□□□ 0.82
SCARB2-213ENST00000638680 MAD1L1Q9Y6D9 718 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 PHKG2P15735 406 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 PROSER3Q2NL68 480 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 PANX2Q96RD6 677 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 JPH2Q9BR39 696 aaPredicted RBP20.15■□□□□ 0.82
SCARB2-213ENST00000638680 SPZ1Q9BXG8 430 aa20.15■□□□□ 0.82
SCARB2-213ENST00000638680 LARSQ9P2J5 1176 aaKnown RBP20.15■□□□□ 0.82
SCARB2-213ENST00000638680 PCCAP05165 728 aaPredicted RBP20.14■□□□□ 0.82
SCARB2-213ENST00000638680 GYS2P54840 703 aa20.14■□□□□ 0.82
SCARB2-213ENST00000638680 SCYL3Q8IZE3 742 aa20.14■□□□□ 0.82
SCARB2-213ENST00000638680 CHURC1Q8WUH1 139 aa20.14■□□□□ 0.82
SCARB2-213ENST00000638680 TEKT3Q9BXF9 490 aa20.14■□□□□ 0.82
SCARB2-213ENST00000638680 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.14■□□□□ 0.82
SCARB2-213ENST00000638680 ZNF521Q96K83 1311 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 EVI5O60447 810 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 ARHGAP4P98171 946 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 FAM133AQ8N9E0 248 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.14■□□□□ 0.81
SCARB2-213ENST00000638680 CD2APQ9Y5K6 639 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 SART1O43290 800 aaKnown RBP20.14■□□□□ 0.81
SCARB2-213ENST00000638680 NDUFA10O95299 355 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 AFPP02771 609 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms