RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PWP2Q15269 919 aaKnown RBP19.52■□□□□ 0.72
CACNA1A-259ENST00000638114 TAPT1Q6NXT6 567 aa19.52■□□□□ 0.72
CACNA1A-259ENST00000638114 TLK2Q86UE8 772 aa19.52■□□□□ 0.72
CACNA1A-259ENST00000638114 MB21D2Q8IYB1 491 aaPredicted RBP19.52■□□□□ 0.72
CACNA1A-259ENST00000638114 SENP2Q9HC62 589 aa19.52■□□□□ 0.72
CACNA1A-259ENST00000638114 PQBP1O60828 265 aaKnown RBP19.51■□□□□ 0.71
CACNA1A-259ENST00000638114 ASGR1P07306 291 aa19.51■□□□□ 0.71
CACNA1A-259ENST00000638114 SMPD1P17405 629 aa19.51■□□□□ 0.71
CACNA1A-259ENST00000638114 BEX3Q00994 111 aa19.51■□□□□ 0.71
CACNA1A-259ENST00000638114 GRM4Q14833 912 aa19.51■□□□□ 0.71
CACNA1A-259ENST00000638114 IQSEC1Q6DN90 963 aa19.51■□□□□ 0.71
CACNA1A-259ENST00000638114 RGS22Q8NE09 1264 aa19.51■□□□□ 0.71
CACNA1A-259ENST00000638114 GLT1D1Q96MS3 346 aa19.51■□□□□ 0.71
CACNA1A-259ENST00000638114 MPHOSPH6Q99547 160 aaKnown RBP19.51■□□□□ 0.71
CACNA1A-259ENST00000638114 AP5M1Q9H0R1 490 aa19.51■□□□□ 0.71
CACNA1A-259ENST00000638114 PDLIM7Q9NR12 457 aa19.51■□□□□ 0.71
CACNA1A-259ENST00000638114 GNEQ9Y223 722 aaKnown RBP19.51■□□□□ 0.71
CACNA1A-259ENST00000638114 PALM3A6NDB9 673 aaPredicted RBP19.5■□□□□ 0.71
CACNA1A-259ENST00000638114 SLC27A2O14975 620 aa19.5■□□□□ 0.71
CACNA1A-259ENST00000638114 PTGS1P23219 599 aa19.5■□□□□ 0.71
CACNA1A-259ENST00000638114 PDE4DQ08499 809 aa19.5■□□□□ 0.71
CACNA1A-259ENST00000638114 CASC1Q6TDU7 716 aa19.5■□□□□ 0.71
CACNA1A-259ENST00000638114 CATIPQ7Z7H3 387 aa19.5■□□□□ 0.71
CACNA1A-259ENST00000638114 DNERQ8NFT8 737 aa19.5■□□□□ 0.71
CACNA1A-259ENST00000638114 VTI1AQ96AJ9 217 aa19.5■□□□□ 0.71
CACNA1A-259ENST00000638114 MRPL11Q9Y3B7 192 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-259ENST00000638114 LTBP2Q14767 1821 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 B4DLN1 442 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 CTAGE5O15320 804 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 DYNC1LI2O43237 492 aaPredicted RBP19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 PRC1O43663 620 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 MRPL12P52815 198 aaKnown RBP19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 TMEM63BQ5T3F8 832 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 CREB3L3Q68CJ9 461 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 SH3RF1Q7Z6J0 888 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 HOMER1Q86YM7 354 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 MCF2L2Q86YR7 1114 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 TDHQ8IZJ6 230 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 IGDCC4Q8TDY8 1250 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 TBC1D5Q92609 795 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 AMNQ9BXJ7 453 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 ELP1O95163 1332 aa19.49■□□□□ 0.71
CACNA1A-259ENST00000638114 ZBTB5O15062 677 aa19.48■□□□□ 0.71
CACNA1A-259ENST00000638114 CDC45O75419 566 aa19.48■□□□□ 0.71
CACNA1A-259ENST00000638114 NEFLP07196 543 aa19.48■□□□□ 0.71
CACNA1A-259ENST00000638114 CLTBP09497 229 aa19.48■□□□□ 0.71
CACNA1A-259ENST00000638114 EDNRBP24530 442 aa19.48■□□□□ 0.71
CACNA1A-259ENST00000638114 NKX3-2P78367 333 aa19.48■□□□□ 0.71
CACNA1A-259ENST00000638114 TROAPQ12815 778 aa19.48■□□□□ 0.71
CACNA1A-259ENST00000638114 FSCN1Q16658 493 aaKnown RBP19.48■□□□□ 0.71
CACNA1A-259ENST00000638114 MTMR8Q96EF0 704 aa19.48■□□□□ 0.71
CACNA1A-259ENST00000638114 WDR11Q9BZH6 1224 aa19.48■□□□□ 0.71
CACNA1A-259ENST00000638114 MAF1Q9H063 256 aa19.48■□□□□ 0.71
CACNA1A-259ENST00000638114 TRIM43BA6NCK2 446 aa19.47■□□□□ 0.71
CACNA1A-259ENST00000638114 DCDC2CA8MYV0 355 aa19.47■□□□□ 0.71
CACNA1A-259ENST00000638114 MCM5P33992 734 aa19.47■□□□□ 0.71
CACNA1A-259ENST00000638114 NECTIN1Q15223 517 aa19.47■□□□□ 0.71
CACNA1A-259ENST00000638114 DUSP28Q4G0W2 176 aa19.47■□□□□ 0.71
CACNA1A-259ENST00000638114 SYTL5Q8TDW5 730 aaPredicted RBP19.47■□□□□ 0.71
CACNA1A-259ENST00000638114 TRIM43Q96BQ3 446 aaPredicted RBP19.47■□□□□ 0.71
CACNA1A-259ENST00000638114 LY9Q9HBG7 655 aa19.47■□□□□ 0.71
CACNA1A-259ENST00000638114 GPHNQ9NQX3 736 aaPredicted RBP19.47■□□□□ 0.71
CACNA1A-259ENST00000638114 Q9Y3F1 56 aa19.47■□□□□ 0.71
CACNA1A-259ENST00000638114 BAZ2BQ9UIF8 2168 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 A0A0U1RQG5 324 aaPredicted RBP19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 SOX1O00570 391 aaPredicted RBP19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 ZEB2O60315 1214 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 PPP1R11O60927 126 aaPredicted RBP19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 CFBP00751 764 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 SLC35G1Q2M3R5 365 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 CXCL17Q6UXB2 119 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 NFXL1Q6ZNB6 911 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 ANKRD33Q7Z3H0 272 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 ZNF654Q8IZM8 581 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 BADQ92934 168 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 TMEM87BQ96K49 555 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 TAAR1Q96RJ0 339 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 PIGSQ96S52 555 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 MTA3Q9BTC8 594 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 MYL10Q9BUA6 226 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 RIOX1Q9H6W3 641 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 TMEM39AQ9NV64 488 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 COL20A1Q9P218 1284 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 PCDHA1Q9Y5I3 950 aa19.46■□□□□ 0.71
CACNA1A-259ENST00000638114 RBM47A0AV96 593 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-259ENST00000638114 SH2B2O14492 632 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-259ENST00000638114 DDAH1O94760 285 aa19.45■□□□□ 0.7
CACNA1A-259ENST00000638114 COL9A3Q14050 684 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-259ENST00000638114 PPP2R5BQ15173 497 aa19.45■□□□□ 0.7
CACNA1A-259ENST00000638114 RNF20Q5VTR2 975 aa19.45■□□□□ 0.7
CACNA1A-259ENST00000638114 CTCFLQ8NI51 663 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-259ENST00000638114 NSUN6Q8TEA1 469 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-259ENST00000638114 LRCH3Q96II8 777 aa19.45■□□□□ 0.7
CACNA1A-259ENST00000638114 TOX2Q96NM4 488 aa19.45■□□□□ 0.7
CACNA1A-259ENST00000638114 RMDN3Q96TC7 470 aa19.45■□□□□ 0.7
CACNA1A-259ENST00000638114 MROH7Q68CQ1 1323 aa19.45■□□□□ 0.7
CACNA1A-259ENST00000638114 CCDC69A6NI79 296 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 ARVCFO00192 962 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 OPLAHO14841 1288 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 KIAA0355O15063 1070 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms