RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 DDNO94850 711 aaPredicted RBP24.49■■□□□ 1.51
CHRNA7-228ENST00000637519 FAM43AQ8N2R8 423 aa24.49■■□□□ 1.51
CHRNA7-228ENST00000637519 HS1BP3Q53T59 392 aa24.48■■□□□ 1.51
CHRNA7-228ENST00000637519 CABP7Q86V35 215 aa24.48■■□□□ 1.51
CHRNA7-228ENST00000637519 ZSCAN30Q86W11 494 aa24.48■■□□□ 1.51
CHRNA7-228ENST00000637519 SMYD4Q8IYR2 804 aaPredicted RBP24.48■■□□□ 1.51
CHRNA7-228ENST00000637519 HSD3B7Q9H2F3 369 aa24.48■■□□□ 1.51
CHRNA7-228ENST00000637519 POTEMA6NI47 508 aa24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 YBX3P16989 372 aaKnown RBP eCLIP24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 LMOD1P29536 600 aaPredicted RBP24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 FMR1Q06787 632 aaKnown RBP eCLIP24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 RRAGBQ5VZM2 374 aa24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 SARM1Q6SZW1 724 aa24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 DLK2Q6UY11 383 aa24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 TRMT44Q8IYL2 757 aaKnown RBP24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 SYT17Q9BSW7 474 aa24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 SMC2O95347 1197 aa24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 ZKSCAN4Q969J2 545 aaPredicted RBP24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 MMTAG2Q9BU76 263 aaKnown RBP24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 CCSER1Q9C0I3 900 aa24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 TTC12Q9H892 705 aaPredicted RBP24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.47■■□□□ 1.51
CHRNA7-228ENST00000637519 PLCG1P19174 1290 aa24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 PPP4R3AQ6IN85 833 aa24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 IGSF22Q8N9C0 903 aa24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 TBC1D5Q92609 795 aa24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 CCDC34Q96HJ3 373 aa24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 RANBP17Q9H2T7 1088 aaKnown RBP24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 RNF181Q9P0P0 153 aa24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 SBF1O95248 1867 aa24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 CTNND1O60716 968 aaKnown RBP24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 ATP1A3P13637 1013 aa24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 ORC2Q13416 577 aaPredicted RBP24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 HAS1Q92839 578 aa24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 NRBP1Q9UHY1 535 aa24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 DICER1Q9UPY3 1922 aaKnown RBP24.46■■□□□ 1.51
CHRNA7-228ENST00000637519 MYL5Q02045 173 aa24.45■■□□□ 1.5
CHRNA7-228ENST00000637519 MTMR2Q13614 643 aa24.45■■□□□ 1.5
CHRNA7-228ENST00000637519 HSP90AA4PQ58FG1 418 aa24.45■■□□□ 1.5
CHRNA7-228ENST00000637519 DRC7Q8IY82 874 aa24.45■■□□□ 1.5
CHRNA7-228ENST00000637519 CHURC1Q8WUH1 139 aa24.45■■□□□ 1.5
CHRNA7-228ENST00000637519 AK8Q96MA6 479 aa24.45■■□□□ 1.5
CHRNA7-228ENST00000637519 WRNIP1Q96S55 665 aa24.45■■□□□ 1.5
CHRNA7-228ENST00000637519 GLT8D2Q9H1C3 349 aa24.45■■□□□ 1.5
CHRNA7-228ENST00000637519 CD44P16070 742 aaKnown RBP24.44■■□□□ 1.5
CHRNA7-228ENST00000637519 APOBEC3FQ8IUX4 373 aaKnown RBP24.44■■□□□ 1.5
CHRNA7-228ENST00000637519 MED15Q96RN5 788 aa24.44■■□□□ 1.5
CHRNA7-228ENST00000637519 IKBKBO14920 756 aa24.44■■□□□ 1.5
CHRNA7-228ENST00000637519 TRIML1Q8N9V2 468 aa24.44■■□□□ 1.5
CHRNA7-228ENST00000637519 PYM1Q9BRP8 204 aaKnown RBP24.44■■□□□ 1.5
CHRNA7-228ENST00000637519 SSC5DA1L4H1 1573 aa24.43■■□□□ 1.5
CHRNA7-228ENST00000637519 SMTNL1A8MU46 457 aa24.43■■□□□ 1.5
CHRNA7-228ENST00000637519 GTPBP6O43824 516 aaPredicted RBP24.43■■□□□ 1.5
CHRNA7-228ENST00000637519 ARHGAP4P98171 946 aa24.43■■□□□ 1.5
CHRNA7-228ENST00000637519 AP3B2Q13367 1082 aa24.43■■□□□ 1.5
CHRNA7-228ENST00000637519 PRKG1Q13976 671 aa24.43■■□□□ 1.5
CHRNA7-228ENST00000637519 FCHSD1Q86WN1 690 aa24.43■■□□□ 1.5
CHRNA7-228ENST00000637519 NUDT12Q9BQG2 462 aa24.43■■□□□ 1.5
CHRNA7-228ENST00000637519 LRWD1Q9UFC0 647 aa24.43■■□□□ 1.5
CHRNA7-228ENST00000637519 FEM1BQ9UK73 627 aa24.43■■□□□ 1.5
CHRNA7-228ENST00000637519 ZKSCAN5Q9Y2L8 839 aa24.43■■□□□ 1.5
CHRNA7-228ENST00000637519 SPDYE3A6NKU9 549 aa24.42■■□□□ 1.5
CHRNA7-228ENST00000637519 CFBP00751 764 aa24.42■■□□□ 1.5
CHRNA7-228ENST00000637519 FXR2P51116 673 aaKnown RBP eCLIP24.42■■□□□ 1.5
CHRNA7-228ENST00000637519 KLHL10Q6JEL2 608 aa24.42■■□□□ 1.5
CHRNA7-228ENST00000637519 MLKLQ8NB16 471 aa24.42■■□□□ 1.5
CHRNA7-228ENST00000637519 PTGS1P23219 599 aa24.42■■□□□ 1.5
CHRNA7-228ENST00000637519 FAM160B2Q86V87 743 aa24.42■■□□□ 1.5
CHRNA7-228ENST00000637519 CRYGNQ8WXF5 182 aa24.42■■□□□ 1.5
CHRNA7-228ENST00000637519 GSDMAQ96QA5 445 aa24.42■■□□□ 1.5
CHRNA7-228ENST00000637519 KIAA1683Q9H0B3 1180 aa24.42■■□□□ 1.5
CHRNA7-228ENST00000637519 FANCLQ9NW38 375 aa24.42■■□□□ 1.5
CHRNA7-228ENST00000637519 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.42■■□□□ 1.5
CHRNA7-228ENST00000637519 DCAF15Q66K64 600 aa24.41■■□□□ 1.5
CHRNA7-228ENST00000637519 AGBL1Q96MI9 1066 aa24.41■■□□□ 1.5
CHRNA7-228ENST00000637519 IFNKQ9P0W0 207 aa24.41■■□□□ 1.5
CHRNA7-228ENST00000637519 COBLO75128 1261 aa24.41■■□□□ 1.5
CHRNA7-228ENST00000637519 MSNP26038 577 aaKnown RBP24.41■■□□□ 1.5
CHRNA7-228ENST00000637519 SPP2Q13103 211 aa24.41■■□□□ 1.5
CHRNA7-228ENST00000637519 DHX8Q14562 1220 aaKnown RBP24.41■■□□□ 1.5
CHRNA7-228ENST00000637519 TMEM266Q2M3C6 531 aa24.41■■□□□ 1.5
CHRNA7-228ENST00000637519 CCDC144BQ3MJ40 725 aa24.41■■□□□ 1.5
CHRNA7-228ENST00000637519 TANGO6Q9C0B7 1094 aa24.41■■□□□ 1.5
CHRNA7-228ENST00000637519 KCNF1Q9H3M0 494 aa24.41■■□□□ 1.5
CHRNA7-228ENST00000637519 DOCK1Q14185 1865 aa24.4■■□□□ 1.5
CHRNA7-228ENST00000637519 MARCH6O60337 910 aa24.4■■□□□ 1.5
CHRNA7-228ENST00000637519 GCFC2P16383 781 aaKnown RBP24.4■■□□□ 1.5
CHRNA7-228ENST00000637519 VCAM1P19320 739 aa24.4■■□□□ 1.5
CHRNA7-228ENST00000637519 STX17P56962 302 aa24.4■■□□□ 1.5
CHRNA7-228ENST00000637519 GRB10Q13322 594 aa24.4■■□□□ 1.5
CHRNA7-228ENST00000637519 LDHDQ86WU2 507 aa24.4■■□□□ 1.5
CHRNA7-228ENST00000637519 SCYL3Q8IZE3 742 aa24.4■■□□□ 1.5
CHRNA7-228ENST00000637519 XPO4Q9C0E2 1151 aaKnown RBP24.4■■□□□ 1.5
CHRNA7-228ENST00000637519 EMILIN3Q9NT22 766 aa24.4■■□□□ 1.5
CHRNA7-228ENST00000637519 FAM86B1E9PN63 330 aa24.39■■□□□ 1.5
CHRNA7-228ENST00000637519 WDR46O15213 610 aaKnown RBP24.39■■□□□ 1.5
CHRNA7-228ENST00000637519 PLA2G6O60733 806 aa24.39■■□□□ 1.5
CHRNA7-228ENST00000637519 RPN1P04843 607 aaKnown RBP24.39■■□□□ 1.5
CHRNA7-228ENST00000637519 FAM86B2P0C5J1 330 aa24.39■■□□□ 1.5
CHRNA7-228ENST00000637519 PRR16Q569H4 304 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms